RNA–Protein interactions for RNA: ENST00000399220.2

CX3CR1-202, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CR1, Length 3,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-202ENST00000399220 SIPA1L3O60292 1781 aaPredicted RBP8.97□□□□□ -0.97
CX3CR1-202ENST00000399220 U2AF1L5P0DN76 240 aaPredicted RBP8.96□□□□□ -0.97
CX3CR1-202ENST00000399220 U2AF1Q01081 240 aaKnown RBP eCLIP8.96□□□□□ -0.97
CX3CR1-202ENST00000399220 CCDC146Q8IYE0 955 aa8.96□□□□□ -0.97
CX3CR1-202ENST00000399220 LTBP4Q8N2S1 1624 aa8.96□□□□□ -0.97
CX3CR1-202ENST00000399220 TNNT2P45379 298 aaPredicted RBP8.96□□□□□ -0.98
CX3CR1-202ENST00000399220 BRPF1P55201 1214 aaPredicted RBP8.96□□□□□ -0.98
CX3CR1-202ENST00000399220 KCNH5Q8NCM2 988 aa8.96□□□□□ -0.98
CX3CR1-202ENST00000399220 TSHZ2Q9NRE2 1034 aa8.96□□□□□ -0.98
CX3CR1-202ENST00000399220 MAP3K19Q56UN5 1328 aa8.96□□□□□ -0.98
CX3CR1-202ENST00000399220 OVOS2A0A0G2JMS6 1433 aa8.96□□□□□ -0.98
CX3CR1-202ENST00000399220 AHDC1Q5TGY3 1603 aaPredicted RBP8.96□□□□□ -0.98
CX3CR1-202ENST00000399220 PKD1L3Q7Z443 1732 aa8.96□□□□□ -0.98
CX3CR1-202ENST00000399220 RGPD2P0DJD1 1756 aa8.96□□□□□ -0.98
CX3CR1-202ENST00000399220 EIF4A2Q14240 407 aaKnown RBP8.96□□□□□ -0.98
CX3CR1-202ENST00000399220 NFE2L2Q16236 605 aa8.96□□□□□ -0.98
CX3CR1-202ENST00000399220 PROSER2Q86WR7 435 aaPredicted RBP8.96□□□□□ -0.98
CX3CR1-202ENST00000399220 ZNF853P0CG23 659 aa8.95□□□□□ -0.98
CX3CR1-202ENST00000399220 ZNF428Q96B54 188 aa8.95□□□□□ -0.98
CX3CR1-202ENST00000399220 SPINK5Q9NQ38 1064 aaPredicted RBP8.95□□□□□ -0.98
CX3CR1-202ENST00000399220 TNS3Q68CZ2 1445 aa8.95□□□□□ -0.98
CX3CR1-202ENST00000399220 PARP4Q9UKK3 1724 aaKnown RBP8.95□□□□□ -0.98
CX3CR1-202ENST00000399220 MSH6P52701 1360 aa8.95□□□□□ -0.98
CX3CR1-202ENST00000399220 KDM3BQ7LBC6 1761 aa8.95□□□□□ -0.98
CX3CR1-202ENST00000399220 CADPS2Q86UW7 1296 aa8.95□□□□□ -0.98
CX3CR1-202ENST00000399220 RGPD5Q99666 1765 aa8.95□□□□□ -0.98
CX3CR1-202ENST00000399220 PMFBP1Q8TBY8 1022 aa8.94□□□□□ -0.98
CX3CR1-202ENST00000399220 MYH16Q9H6N6 1097 aa8.94□□□□□ -0.98
CX3CR1-202ENST00000399220 CPDO75976 1380 aa8.94□□□□□ -0.98
CX3CR1-202ENST00000399220 HTATSF1O43719 755 aaKnown RBP8.94□□□□□ -0.98
CX3CR1-202ENST00000399220 CALD1Q05682 793 aaKnown RBP8.94□□□□□ -0.98
CX3CR1-202ENST00000399220 LMOD3Q0VAK6 560 aa8.94□□□□□ -0.98
CX3CR1-202ENST00000399220 AAMPQ13685 434 aa8.94□□□□□ -0.98
CX3CR1-202ENST00000399220 DMRT2Q9Y5R5 561 aa8.94□□□□□ -0.98
CX3CR1-202ENST00000399220 MAPK8IP3Q9UPT6 1336 aa8.94□□□□□ -0.98
CX3CR1-202ENST00000399220 CACNA1FO60840 1977 aa8.93□□□□□ -0.98
CX3CR1-202ENST00000399220 HOXC9P31274 260 aa8.93□□□□□ -0.98
CX3CR1-202ENST00000399220 IP6K1Q92551 441 aa8.93□□□□□ -0.98
CX3CR1-202ENST00000399220 RRS1Q15050 365 aaKnown RBP8.92□□□□□ -0.98
CX3CR1-202ENST00000399220 PRKAR2BP31323 418 aa8.92□□□□□ -0.98
CX3CR1-202ENST00000399220 PSME1Q06323 249 aa8.92□□□□□ -0.98
CX3CR1-202ENST00000399220 IFT57Q9NWB7 429 aa8.92□□□□□ -0.98
CX3CR1-202ENST00000399220 CRB1P82279 1406 aa8.92□□□□□ -0.98
CX3CR1-202ENST00000399220 PDE3AQ14432 1141 aa8.91□□□□□ -0.98
CX3CR1-202ENST00000399220 BABAM1Q9NWV8 329 aa8.91□□□□□ -0.98
CX3CR1-202ENST00000399220 NPHP3Q7Z494 1330 aa8.91□□□□□ -0.98
CX3CR1-202ENST00000399220 ARHGEF25Q86VW2 580 aa8.91□□□□□ -0.98
CX3CR1-202ENST00000399220 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.91□□□□□ -0.98
CX3CR1-202ENST00000399220 PLCH1Q4KWH8 1693 aa8.91□□□□□ -0.98
CX3CR1-202ENST00000399220 SOS2Q07890 1332 aaPredicted RBP8.91□□□□□ -0.98
CX3CR1-202ENST00000399220 U2SURPO15042 1029 aaKnown RBP8.91□□□□□ -0.98
CX3CR1-202ENST00000399220 NLRP6P59044 892 aa8.91□□□□□ -0.98
CX3CR1-202ENST00000399220 ESCO1Q5FWF5 840 aa8.91□□□□□ -0.98
CX3CR1-202ENST00000399220 ABTB2Q8N961 1025 aa8.91□□□□□ -0.98
CX3CR1-202ENST00000399220 KIAA0232Q92628 1395 aa8.91□□□□□ -0.98
CX3CR1-202ENST00000399220 SOS1Q07889 1333 aaPredicted RBP8.9□□□□□ -0.98
CX3CR1-202ENST00000399220 FANCIQ9NVI1 1328 aa8.9□□□□□ -0.98
CX3CR1-202ENST00000399220 ORAI2Q96SN7 254 aa8.9□□□□□ -0.98
CX3CR1-202ENST00000399220 WNK3Q9BYP7 1800 aa8.9□□□□□ -0.98
CX3CR1-202ENST00000399220 SCN11AQ9UI33 1791 aa8.9□□□□□ -0.98
CX3CR1-202ENST00000399220 ATF3P18847 181 aa8.9□□□□□ -0.98
CX3CR1-202ENST00000399220 RIPK4P57078 832 aa8.9□□□□□ -0.98
CX3CR1-202ENST00000399220 ALDH1L2Q3SY69 923 aa8.9□□□□□ -0.98
CX3CR1-202ENST00000399220 HSP90AB2PQ58FF8 381 aa8.9□□□□□ -0.98
CX3CR1-202ENST00000399220 PHACTR3Q96KR7 559 aa8.9□□□□□ -0.98
CX3CR1-202ENST00000399220 FBLN1P23142 703 aa8.89□□□□□ -0.99
CX3CR1-202ENST00000399220 KRT28Q7Z3Y7 464 aa8.89□□□□□ -0.99
CX3CR1-202ENST00000399220 SPATA31A3Q5VYP0 1347 aa8.89□□□□□ -0.99
CX3CR1-202ENST00000399220 RARSP54136 660 aaKnown RBP8.89□□□□□ -0.99
CX3CR1-202ENST00000399220 NUTM2FA1L443 756 aa8.89□□□□□ -0.99
CX3CR1-202ENST00000399220 MRC1P22897 1456 aa8.88□□□□□ -0.99
CX3CR1-202ENST00000399220 NEFMP07197 916 aa8.88□□□□□ -0.99
CX3CR1-202ENST00000399220 HSPA2P54652 639 aa8.88□□□□□ -0.99
CX3CR1-202ENST00000399220 GNAI1P63096 354 aa8.88□□□□□ -0.99
CX3CR1-202ENST00000399220 CFAP44Q96MT7 982 aa8.88□□□□□ -0.99
CX3CR1-202ENST00000399220 SHANK3Q9BYB0 1731 aa8.88□□□□□ -0.99
CX3CR1-202ENST00000399220 CEMIPQ8WUJ3 1361 aa8.88□□□□□ -0.99
CX3CR1-202ENST00000399220 EYA1Q99502 592 aa8.88□□□□□ -0.99
CX3CR1-202ENST00000399220 ROBO1Q9Y6N7 1651 aa8.88□□□□□ -0.99
CX3CR1-202ENST00000399220 COL14A1Q05707 1796 aaKnown RBP8.87□□□□□ -0.99
CX3CR1-202ENST00000399220 GCP02774 474 aa8.87□□□□□ -0.99
CX3CR1-202ENST00000399220 GAS2L2Q8NHY3 880 aa8.87□□□□□ -0.99
CX3CR1-202ENST00000399220 PAPPAQ13219 1627 aa8.86□□□□□ -0.99
CX3CR1-202ENST00000399220 CHL1O00533 1208 aa8.86□□□□□ -0.99
CX3CR1-202ENST00000399220 SULT6B1Q6IMI4 303 aa8.86□□□□□ -0.99
CX3CR1-202ENST00000399220 BRINP3Q76B58 766 aa8.86□□□□□ -0.99
CX3CR1-202ENST00000399220 SALL2Q9Y467 1007 aaPredicted RBP8.86□□□□□ -0.99
CX3CR1-202ENST00000399220 AMPHP49418 695 aa8.86□□□□□ -0.99
CX3CR1-202ENST00000399220 ARHGAP45Q92619 1136 aa8.86□□□□□ -0.99
CX3CR1-202ENST00000399220 RRP7AQ9Y3A4 280 aaKnown RBP8.86□□□□□ -0.99
CX3CR1-202ENST00000399220 MS4A1P11836 297 aa8.85□□□□□ -0.99
CX3CR1-202ENST00000399220 ZNF335Q9H4Z2 1342 aaPredicted RBP8.85□□□□□ -0.99
CX3CR1-202ENST00000399220 COL16A1Q07092 1604 aaPredicted RBP8.85□□□□□ -0.99
CX3CR1-202ENST00000399220 KDM2BQ8NHM5 1336 aa8.85□□□□□ -0.99
CX3CR1-202ENST00000399220 HMOX1P09601 288 aa8.85□□□□□ -0.99
CX3CR1-202ENST00000399220 AEBP1Q8IUX7 1158 aa8.85□□□□□ -0.99
CX3CR1-202ENST00000399220 MAP3K5Q99683 1374 aa8.85□□□□□ -0.99
CX3CR1-202ENST00000399220 NRAPQ86VF7 1730 aa8.84□□□□□ -0.99
CX3CR1-202ENST00000399220 FOXO3O43524 673 aa8.84□□□□□ -0.99
CX3CR1-202ENST00000399220 C14orf37Q86TY3 774 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms