RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 NFAT5O94916 1531 aa20.24■□□□□ 0.83
SEC13-208ENST00000397109 COL18A1P39060 1754 aa20.24■□□□□ 0.83
SEC13-208ENST00000397109 HSPA5P11021 654 aaKnown RBP20.23■□□□□ 0.83
SEC13-208ENST00000397109 AXIN2Q9Y2T1 843 aa20.23■□□□□ 0.83
SEC13-208ENST00000397109 CRB1P82279 1406 aa20.22■□□□□ 0.83
SEC13-208ENST00000397109 THSD7AQ9UPZ6 1657 aa20.22■□□□□ 0.83
SEC13-208ENST00000397109 COG3Q96JB2 828 aa20.22■□□□□ 0.83
SEC13-208ENST00000397109 OVOS2A0A0J9YW53 1432 aa20.22■□□□□ 0.83
SEC13-208ENST00000397109 OVOS2Q6IE36 1432 aa20.22■□□□□ 0.83
SEC13-208ENST00000397109 ABCC6O95255 1503 aa20.21■□□□□ 0.83
SEC13-208ENST00000397109 WDR17Q8IZU2 1322 aa20.2■□□□□ 0.82
SEC13-208ENST00000397109 TOM1L2Q6ZVM7 507 aa20.2■□□□□ 0.82
SEC13-208ENST00000397109 BLMP54132 1417 aaPredicted RBP20.19■□□□□ 0.82
SEC13-208ENST00000397109 EP400Q96L91 3159 aa20.18■□□□□ 0.82
SEC13-208ENST00000397109 CSB-PGBD3P0DP91 1061 aa20.18■□□□□ 0.82
SEC13-208ENST00000397109 SF3B2Q13435 895 aaKnown RBP20.18■□□□□ 0.82
SEC13-208ENST00000397109 FYB1O15117 783 aa20.17■□□□□ 0.82
SEC13-208ENST00000397109 PDE3BQ13370 1112 aa20.17■□□□□ 0.82
SEC13-208ENST00000397109 RGPD5Q99666 1765 aa20.16■□□□□ 0.82
SEC13-208ENST00000397109 POLR3GLQ9BT43 218 aa20.16■□□□□ 0.82
SEC13-208ENST00000397109 CARD10Q9BWT7 1032 aa20.16■□□□□ 0.82
SEC13-208ENST00000397109 MYOM1P52179 1685 aa20.14■□□□□ 0.81
SEC13-208ENST00000397109 CDCA7Q9BWT1 371 aaPredicted RBP20.14■□□□□ 0.81
SEC13-208ENST00000397109 LTN1O94822 1766 aa20.14■□□□□ 0.81
SEC13-208ENST00000397109 FAM196AQ6ZSG2 479 aa20.13■□□□□ 0.81
SEC13-208ENST00000397109 IP6K1Q92551 441 aa20.13■□□□□ 0.81
SEC13-208ENST00000397109 CARD14Q9BXL6 1004 aa20.13■□□□□ 0.81
SEC13-208ENST00000397109 GGNBP2Q9H3C7 697 aa20.13■□□□□ 0.81
SEC13-208ENST00000397109 ERBB3P21860 1342 aa20.12■□□□□ 0.81
SEC13-208ENST00000397109 CCDC7Q96M83 1385 aa20.12■□□□□ 0.81
SEC13-208ENST00000397109 NSD3Q9BZ95 1437 aa20.12■□□□□ 0.81
SEC13-208ENST00000397109 C11orf95C9JLR9 678 aaPredicted RBP20.11■□□□□ 0.81
SEC13-208ENST00000397109 FAM182BQ5T319 152 aa20.11■□□□□ 0.81
SEC13-208ENST00000397109 ANKRD24Q8TF21 1146 aa20.11■□□□□ 0.81
SEC13-208ENST00000397109 PARP4Q9UKK3 1724 aaKnown RBP20.1■□□□□ 0.81
SEC13-208ENST00000397109 AMPHP49418 695 aa20.1■□□□□ 0.81
SEC13-208ENST00000397109 MAP3K19Q56UN5 1328 aa20.1■□□□□ 0.81
SEC13-208ENST00000397109 DDB1Q16531 1140 aa20.09■□□□□ 0.81
SEC13-208ENST00000397109 NLRP2Q9NX02 1062 aa20.09■□□□□ 0.81
SEC13-208ENST00000397109 CGNL1Q0VF96 1302 aa20.09■□□□□ 0.81
SEC13-208ENST00000397109 KIF20BQ96Q89 1820 aa20.09■□□□□ 0.81
SEC13-208ENST00000397109 BAG6P46379 1132 aa20.08■□□□□ 0.81
SEC13-208ENST00000397109 HOXC9P31274 260 aa20.06■□□□□ 0.8
SEC13-208ENST00000397109 DEFB132Q7Z7B7 95 aa20.06■□□□□ 0.8
SEC13-208ENST00000397109 RTL1A6NKG5 1358 aa20.05■□□□□ 0.8
SEC13-208ENST00000397109 FBLN1P23142 703 aa20.05■□□□□ 0.8
SEC13-208ENST00000397109 RGPD1P0DJD0 1748 aa20.05■□□□□ 0.8
SEC13-208ENST00000397109 DISP2A7MBM2 1401 aa20.05■□□□□ 0.8
SEC13-208ENST00000397109 EXOC5O00471 708 aa20.05■□□□□ 0.8
SEC13-208ENST00000397109 RRS1Q15050 365 aaKnown RBP20.05■□□□□ 0.8
SEC13-208ENST00000397109 PANK3Q9H999 370 aa20.05■□□□□ 0.8
SEC13-208ENST00000397109 WNK3Q9BYP7 1800 aa20.04■□□□□ 0.8
SEC13-208ENST00000397109 TRIM37O94972 964 aa20.04■□□□□ 0.8
SEC13-208ENST00000397109 KIF24Q5T7B8 1368 aa20.03■□□□□ 0.8
SEC13-208ENST00000397109 LTV1Q96GA3 475 aaPredicted RBP20.03■□□□□ 0.8
SEC13-208ENST00000397109 OVOS2A0A0G2JMS6 1433 aa20.02■□□□□ 0.8
SEC13-208ENST00000397109 LRRC37A3O60309 1634 aa20.02■□□□□ 0.8
SEC13-208ENST00000397109 IL2RBP14784 551 aa20.02■□□□□ 0.8
SEC13-208ENST00000397109 FAM208AQ9UK61 1670 aaKnown RBP20.01■□□□□ 0.79
SEC13-208ENST00000397109 KIF7Q2M1P5 1343 aa19.99■□□□□ 0.79
SEC13-208ENST00000397109 APBA3O96018 575 aa19.99■□□□□ 0.79
SEC13-208ENST00000397109 EN1Q05925 392 aaPredicted RBP19.99■□□□□ 0.79
SEC13-208ENST00000397109 MARCH10Q8NA82 808 aaPredicted RBP19.99■□□□□ 0.79
SEC13-208ENST00000397109 INSRP06213 1382 aa19.98■□□□□ 0.79
SEC13-208ENST00000397109 FLT4P35916 1363 aa19.98■□□□□ 0.79
SEC13-208ENST00000397109 BCL9O00512 1426 aa19.98■□□□□ 0.79
SEC13-208ENST00000397109 TNS2Q63HR2 1409 aa19.98■□□□□ 0.79
SEC13-208ENST00000397109 SMG6Q86US8 1419 aaKnown RBP19.98■□□□□ 0.79
SEC13-208ENST00000397109 TNS1Q9HBL0 1735 aaKnown RBP19.97■□□□□ 0.79
SEC13-208ENST00000397109 NSD2O96028 1365 aa19.97■□□□□ 0.79
SEC13-208ENST00000397109 PEAK1Q9H792 1746 aa19.97■□□□□ 0.79
SEC13-208ENST00000397109 HSP90AB2PQ58FF8 381 aa19.96■□□□□ 0.79
SEC13-208ENST00000397109 KNSTRNQ9Y448 316 aa19.96■□□□□ 0.79
SEC13-208ENST00000397109 EMILIN1Q9Y6C2 1016 aa19.95■□□□□ 0.78
SEC13-208ENST00000397109 PARD3Q8TEW0 1356 aa19.95■□□□□ 0.78
SEC13-208ENST00000397109 CAMKK2Q96RR4 588 aa19.94■□□□□ 0.78
SEC13-208ENST00000397109 ANKRD26Q9UPS8 1709 aa19.93■□□□□ 0.78
SEC13-208ENST00000397109 PPM1GO15355 546 aaPredicted RBP19.93■□□□□ 0.78
SEC13-208ENST00000397109 BCL11BQ9C0K0 894 aaPredicted RBP19.93■□□□□ 0.78
SEC13-208ENST00000397109 MAP2P11137 1827 aaKnown RBP19.93■□□□□ 0.78
SEC13-208ENST00000397109 EZH2Q15910 746 aaKnown RBP19.92■□□□□ 0.78
SEC13-208ENST00000397109 NBPF6Q5VWK0 638 aa19.92■□□□□ 0.78
SEC13-208ENST00000397109 NBPF4Q96M43 638 aa19.92■□□□□ 0.78
SEC13-208ENST00000397109 SBF2Q86WG5 1849 aa19.92■□□□□ 0.78
SEC13-208ENST00000397109 WASHC2AQ641Q2 1341 aa19.92■□□□□ 0.78
SEC13-208ENST00000397109 POLKQ9UBT6 870 aa19.92■□□□□ 0.78
SEC13-208ENST00000397109 RGPD2P0DJD1 1756 aa19.9■□□□□ 0.78
SEC13-208ENST00000397109 TNNT2P45379 298 aaPredicted RBP19.9■□□□□ 0.78
SEC13-208ENST00000397109 MORC1Q86VD1 984 aa19.9■□□□□ 0.78
SEC13-208ENST00000397109 RAPGEF4Q8WZA2 1011 aa19.9■□□□□ 0.78
SEC13-208ENST00000397109 PLSCR1O15162 318 aa19.89■□□□□ 0.77
SEC13-208ENST00000397109 ZCRB1Q8TBF4 217 aaKnown RBP19.88■□□□□ 0.77
SEC13-208ENST00000397109 KAT6BQ8WYB5 2073 aa19.88■□□□□ 0.77
SEC13-208ENST00000397109 TATP17735 454 aaPredicted RBP19.87■□□□□ 0.77
SEC13-208ENST00000397109 DDX54Q8TDD1 881 aaKnown RBP19.87■□□□□ 0.77
SEC13-208ENST00000397109 AMER1Q5JTC6 1135 aaPredicted RBP19.86■□□□□ 0.77
SEC13-208ENST00000397109 USHBP1Q8N6Y0 703 aa19.86■□□□□ 0.77
SEC13-208ENST00000397109 PER1O15534 1290 aaPredicted RBP19.85■□□□□ 0.77
SEC13-208ENST00000397109 MEGF6O75095 1541 aa19.85■□□□□ 0.77
SEC13-208ENST00000397109 PTF1AQ7RTS3 328 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms