RNA–Protein interactions for RNA: ENST00000397013.2

NUP98-206, Transcript of nucleoporin 98, humanhuman

TSL 5

Gene NUP98, Length 939 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-206ENST00000397013 TRPM3Q9HCF6 1732 aaPredicted RBP11.8□□□□□ -0.52
NUP98-206ENST00000397013 NWD2Q9ULI1 1742 aa11.8□□□□□ -0.52
NUP98-206ENST00000397013 RAB3GAP2Q9H2M9 1393 aa11.79□□□□□ -0.52
NUP98-206ENST00000397013 EVA1CP58658 441 aa11.79□□□□□ -0.52
NUP98-206ENST00000397013 NBPF8Q3BBV2 869 aa11.79□□□□□ -0.52
NUP98-206ENST00000397013 FAM196AQ6ZSG2 479 aa11.79□□□□□ -0.52
NUP98-206ENST00000397013 LRP5O75197 1615 aa11.78□□□□□ -0.52
NUP98-206ENST00000397013 RNF25Q96BH1 459 aaPredicted RBP11.78□□□□□ -0.52
NUP98-206ENST00000397013 ACEP12821 1306 aa11.78□□□□□ -0.52
NUP98-206ENST00000397013 TULP4Q9NRJ4 1543 aa11.77□□□□□ -0.52
NUP98-206ENST00000397013 PTF1AQ7RTS3 328 aa11.77□□□□□ -0.53
NUP98-206ENST00000397013 HS6ST3Q8IZP7 471 aa11.77□□□□□ -0.53
NUP98-206ENST00000397013 SGIP1Q9BQI5 828 aa11.77□□□□□ -0.53
NUP98-206ENST00000397013 ALS2Q96Q42 1657 aa11.77□□□□□ -0.53
NUP98-206ENST00000397013 COL14A1Q05707 1796 aaKnown RBP11.77□□□□□ -0.53
NUP98-206ENST00000397013 PDE3BQ13370 1112 aa11.76□□□□□ -0.53
NUP98-206ENST00000397013 NBPF1Q3BBV0 1214 aa11.76□□□□□ -0.53
NUP98-206ENST00000397013 DISP2A7MBM2 1401 aa11.76□□□□□ -0.53
NUP98-206ENST00000397013 ADGRB2O60241 1585 aa11.75□□□□□ -0.53
NUP98-206ENST00000397013 ZBTB7CA1YPR0 619 aa11.75□□□□□ -0.53
NUP98-206ENST00000397013 ABTB2Q8N961 1025 aa11.75□□□□□ -0.53
NUP98-206ENST00000397013 ATP7BP35670 1465 aa11.75□□□□□ -0.53
NUP98-206ENST00000397013 THSD7AQ9UPZ6 1657 aa11.75□□□□□ -0.53
NUP98-206ENST00000397013 PLEKHG3A1L390 1219 aa11.74□□□□□ -0.53
NUP98-206ENST00000397013 BARGINQ6ZT62 677 aa11.74□□□□□ -0.53
NUP98-206ENST00000397013 PDGFDQ9GZP0 370 aaPredicted RBP11.74□□□□□ -0.53
NUP98-206ENST00000397013 CCDC61Q9Y6R9 512 aa11.74□□□□□ -0.53
NUP98-206ENST00000397013 SSH2Q76I76 1423 aa11.74□□□□□ -0.53
NUP98-206ENST00000397013 EIF3AQ14152 1382 aaKnown RBP11.73□□□□□ -0.53
NUP98-206ENST00000397013 TCP11L2Q8N4U5 519 aa11.73□□□□□ -0.53
NUP98-206ENST00000397013 CABP2Q9NPB3 220 aa11.73□□□□□ -0.53
NUP98-206ENST00000397013 CAMTA1Q9Y6Y1 1673 aa11.73□□□□□ -0.53
NUP98-206ENST00000397013 GCP02774 474 aa11.72□□□□□ -0.53
NUP98-206ENST00000397013 POLR3AO14802 1390 aaPredicted RBP11.71□□□□□ -0.53
NUP98-206ENST00000397013 PYGBP11216 843 aa11.71□□□□□ -0.53
NUP98-206ENST00000397013 YY1P25490 414 aa11.71□□□□□ -0.53
NUP98-206ENST00000397013 NBPF14Q5TI25 921 aa11.71□□□□□ -0.53
NUP98-206ENST00000397013 TSPYL2Q9H2G4 693 aaPredicted RBP11.71□□□□□ -0.53
NUP98-206ENST00000397013 TNS1Q9HBL0 1735 aaKnown RBP11.71□□□□□ -0.54
NUP98-206ENST00000397013 CRYBG1Q9Y4K1 1723 aa11.71□□□□□ -0.54
NUP98-206ENST00000397013 ANO8Q9HCE9 1232 aaPredicted RBP11.7□□□□□ -0.54
NUP98-206ENST00000397013 AXIN2Q9Y2T1 843 aa11.7□□□□□ -0.54
NUP98-206ENST00000397013 RGPD1P0DJD0 1748 aa11.69□□□□□ -0.54
NUP98-206ENST00000397013 USP19O94966 1318 aa11.69□□□□□ -0.54
NUP98-206ENST00000397013 KCNQ2O43526 872 aa11.69□□□□□ -0.54
NUP98-206ENST00000397013 SRPK2P78362 688 aaKnown RBP11.69□□□□□ -0.54
NUP98-206ENST00000397013 CABP1Q9NZU7 370 aa11.69□□□□□ -0.54
NUP98-206ENST00000397013 ZNF467Q7Z7K2 595 aaPredicted RBP11.68□□□□□ -0.54
NUP98-206ENST00000397013 NLRP13Q86W25 1043 aa11.68□□□□□ -0.54
NUP98-206ENST00000397013 SPRYD3Q8NCJ5 442 aa11.68□□□□□ -0.54
NUP98-206ENST00000397013 SPON1Q9HCB6 807 aa11.68□□□□□ -0.54
NUP98-206ENST00000397013 CPDO75976 1380 aa11.67□□□□□ -0.54
NUP98-206ENST00000397013 NLRP6P59044 892 aa11.67□□□□□ -0.54
NUP98-206ENST00000397013 MARCH10Q8NA82 808 aaPredicted RBP11.67□□□□□ -0.54
NUP98-206ENST00000397013 PPP1R1BQ9UD71 204 aaPredicted RBP11.67□□□□□ -0.54
NUP98-206ENST00000397013 UTRNP46939 3433 aa11.67□□□□□ -0.54
NUP98-206ENST00000397013 PARD3Q8TEW0 1356 aa11.67□□□□□ -0.54
NUP98-206ENST00000397013 SOX12O15370 315 aa11.66□□□□□ -0.54
NUP98-206ENST00000397013 ZBTB7AO95365 584 aa11.66□□□□□ -0.54
NUP98-206ENST00000397013 STAC3Q96MF2 364 aa11.66□□□□□ -0.54
NUP98-206ENST00000397013 THRAP3Q9Y2W1 955 aaKnown RBP11.66□□□□□ -0.54
NUP98-206ENST00000397013 PHRF1Q9P1Y6 1649 aaKnown RBP11.66□□□□□ -0.54
NUP98-206ENST00000397013 PPIP5K1Q6PFW1 1433 aa11.66□□□□□ -0.54
NUP98-206ENST00000397013 COL5A2P05997 1499 aaPredicted RBP11.65□□□□□ -0.54
NUP98-206ENST00000397013 TOM1L2Q6ZVM7 507 aa11.65□□□□□ -0.54
NUP98-206ENST00000397013 PAXIP1Q6ZW49 1069 aaPredicted RBP11.65□□□□□ -0.54
NUP98-206ENST00000397013 NRKQ7Z2Y5 1582 aa11.64□□□□□ -0.55
NUP98-206ENST00000397013 PLSCR1O15162 318 aa11.64□□□□□ -0.55
NUP98-206ENST00000397013 DDB1Q16531 1140 aa11.64□□□□□ -0.55
NUP98-206ENST00000397013 ARHGEF28Q8N1W1 1705 aaKnown RBP11.63□□□□□ -0.55
NUP98-206ENST00000397013 CENPJQ9HC77 1338 aaPredicted RBP11.63□□□□□ -0.55
NUP98-206ENST00000397013 BCL11BQ9C0K0 894 aaPredicted RBP11.63□□□□□ -0.55
NUP98-206ENST00000397013 LMO7Q8WWI1 1683 aa11.62□□□□□ -0.55
NUP98-206ENST00000397013 CRB1P82279 1406 aa11.62□□□□□ -0.55
NUP98-206ENST00000397013 STK25O00506 426 aa11.62□□□□□ -0.55
NUP98-206ENST00000397013 PTGER2P43116 358 aa11.62□□□□□ -0.55
NUP98-206ENST00000397013 NUP188Q5SRE5 1749 aa11.62□□□□□ -0.55
NUP98-206ENST00000397013 AATKQ6ZMQ8 1374 aa11.62□□□□□ -0.55
NUP98-206ENST00000397013 ARHGEF25Q86VW2 580 aa11.61□□□□□ -0.55
NUP98-206ENST00000397013 VSIG10Q8N0Z9 540 aa11.61□□□□□ -0.55
NUP98-206ENST00000397013 ZNF579Q8NAF0 562 aaKnown RBP11.61□□□□□ -0.55
NUP98-206ENST00000397013 RREB1Q92766 1687 aa11.6□□□□□ -0.55
NUP98-206ENST00000397013 CFAP44Q96MT7 982 aa11.6□□□□□ -0.55
NUP98-206ENST00000397013 OVOS2A0A0G2JMS6 1433 aa11.6□□□□□ -0.55
NUP98-206ENST00000397013 OVOS2A0A0J9YW53 1432 aa11.6□□□□□ -0.55
NUP98-206ENST00000397013 USP6P35125 1406 aa11.6□□□□□ -0.55
NUP98-206ENST00000397013 OVOS2Q6IE36 1432 aa11.6□□□□□ -0.55
NUP98-206ENST00000397013 TTC21BQ7Z4L5 1316 aa11.6□□□□□ -0.55
NUP98-206ENST00000397013 WDR17Q8IZU2 1322 aa11.6□□□□□ -0.55
NUP98-206ENST00000397013 TOPAZ1Q8N9V7 1692 aa11.59□□□□□ -0.55
NUP98-206ENST00000397013 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.59□□□□□ -0.55
NUP98-206ENST00000397013 CSB-PGBD3P0DP91 1061 aa11.59□□□□□ -0.55
NUP98-206ENST00000397013 TXNRD1Q16881 649 aa11.59□□□□□ -0.55
NUP98-206ENST00000397013 ACSBG1Q96GR2 724 aa11.59□□□□□ -0.55
NUP98-206ENST00000397013 ZFP91Q96JP5 570 aaPredicted RBP11.59□□□□□ -0.55
NUP98-206ENST00000397013 PDAP1Q13442 181 aaKnown RBP11.58□□□□□ -0.56
NUP98-206ENST00000397013 L3MBTL2Q969R5 705 aa11.58□□□□□ -0.56
NUP98-206ENST00000397013 SIN3AQ96ST3 1273 aa11.58□□□□□ -0.56
NUP98-206ENST00000397013 RYDENQ9NUL5 291 aaKnown RBP11.58□□□□□ -0.56
NUP98-206ENST00000397013 PEAK1Q9H792 1746 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms