RNA–Protein interactions for RNA: ENST00000396654.6

AP1S3-203, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene AP1S3, Length 830 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-203ENST00000396654 COL5A2P05997 1499 aaPredicted RBP23.62■■□□□ 1.37
AP1S3-203ENST00000396654 SPATA31A5Q5VU36 1347 aa23.61■■□□□ 1.37
AP1S3-203ENST00000396654 SPATA31A7Q8IWB4 1347 aa23.61■■□□□ 1.37
AP1S3-203ENST00000396654 COG3Q96JB2 828 aa23.61■■□□□ 1.37
AP1S3-203ENST00000396654 AATKQ6ZMQ8 1374 aa23.61■■□□□ 1.37
AP1S3-203ENST00000396654 SEPT12Q8IYM1 358 aa23.6■■□□□ 1.37
AP1S3-203ENST00000396654 AXIN2Q9Y2T1 843 aa23.59■■□□□ 1.37
AP1S3-203ENST00000396654 FBLN1P23142 703 aa23.58■■□□□ 1.37
AP1S3-203ENST00000396654 SPATA31A1Q5TZJ5 1347 aa23.58■■□□□ 1.36
AP1S3-203ENST00000396654 FYB1O15117 783 aa23.57■■□□□ 1.36
AP1S3-203ENST00000396654 KIF7Q2M1P5 1343 aa23.55■■□□□ 1.36
AP1S3-203ENST00000396654 THSD7AQ9UPZ6 1657 aa23.54■■□□□ 1.36
AP1S3-203ENST00000396654 CSB-PGBD3P0DP91 1061 aa23.54■■□□□ 1.36
AP1S3-203ENST00000396654 PANK3Q9H999 370 aa23.54■■□□□ 1.36
AP1S3-203ENST00000396654 TOM1L2Q6ZVM7 507 aa23.53■■□□□ 1.36
AP1S3-203ENST00000396654 UPF1Q92900 1129 aaKnown RBP eCLIP23.52■■□□□ 1.36
AP1S3-203ENST00000396654 WNK3Q9BYP7 1800 aa23.52■■□□□ 1.36
AP1S3-203ENST00000396654 CRB1P82279 1406 aa23.51■■□□□ 1.35
AP1S3-203ENST00000396654 ONECUT3O60422 494 aaPredicted RBP23.51■■□□□ 1.35
AP1S3-203ENST00000396654 ANKRD26Q9UPS8 1709 aa23.5■■□□□ 1.35
AP1S3-203ENST00000396654 ABCC6O95255 1503 aa23.5■■□□□ 1.35
AP1S3-203ENST00000396654 TCP11L2Q8N4U5 519 aa23.5■■□□□ 1.35
AP1S3-203ENST00000396654 RRS1Q15050 365 aaKnown RBP23.49■■□□□ 1.35
AP1S3-203ENST00000396654 KRT27Q7Z3Y8 459 aa23.49■■□□□ 1.35
AP1S3-203ENST00000396654 MAP3K19Q56UN5 1328 aa23.49■■□□□ 1.35
AP1S3-203ENST00000396654 WDR17Q8IZU2 1322 aa23.49■■□□□ 1.35
AP1S3-203ENST00000396654 FAM182BQ5T319 152 aa23.48■■□□□ 1.35
AP1S3-203ENST00000396654 LTV1Q96GA3 475 aaPredicted RBP23.48■■□□□ 1.35
AP1S3-203ENST00000396654 CGNL1Q0VF96 1302 aa23.48■■□□□ 1.35
AP1S3-203ENST00000396654 RGPD2P0DJD1 1756 aa23.47■■□□□ 1.35
AP1S3-203ENST00000396654 AMPHP49418 695 aa23.47■■□□□ 1.35
AP1S3-203ENST00000396654 MAP2P11137 1827 aaKnown RBP23.46■■□□□ 1.35
AP1S3-203ENST00000396654 ANKRD24Q8TF21 1146 aa23.46■■□□□ 1.35
AP1S3-203ENST00000396654 PEAK1Q9H792 1746 aa23.45■■□□□ 1.34
AP1S3-203ENST00000396654 BARGINQ6ZT62 677 aa23.45■■□□□ 1.34
AP1S3-203ENST00000396654 CCDC7Q96M83 1385 aa23.44■■□□□ 1.34
AP1S3-203ENST00000396654 IP6K1Q92551 441 aa23.44■■□□□ 1.34
AP1S3-203ENST00000396654 PARP4Q9UKK3 1724 aaKnown RBP23.44■■□□□ 1.34
AP1S3-203ENST00000396654 ERBB3P21860 1342 aa23.43■■□□□ 1.34
AP1S3-203ENST00000396654 HOXC9P31274 260 aa23.43■■□□□ 1.34
AP1S3-203ENST00000396654 NLRP2Q9NX02 1062 aa23.43■■□□□ 1.34
AP1S3-203ENST00000396654 WASHC2AQ641Q2 1341 aa23.42■■□□□ 1.34
AP1S3-203ENST00000396654 LRRC37A3O60309 1634 aa23.42■■□□□ 1.34
AP1S3-203ENST00000396654 TNNT2P45379 298 aaPredicted RBP23.42■■□□□ 1.34
AP1S3-203ENST00000396654 THRAP3Q9Y2W1 955 aaKnown RBP23.42■■□□□ 1.34
AP1S3-203ENST00000396654 BLMP54132 1417 aaPredicted RBP23.42■■□□□ 1.34
AP1S3-203ENST00000396654 CARD10Q9BWT7 1032 aa23.41■■□□□ 1.34
AP1S3-203ENST00000396654 FAM208AQ9UK61 1670 aaKnown RBP23.41■■□□□ 1.34
AP1S3-203ENST00000396654 PPM1GO15355 546 aaPredicted RBP23.39■■□□□ 1.33
AP1S3-203ENST00000396654 PDE3BQ13370 1112 aa23.38■■□□□ 1.33
AP1S3-203ENST00000396654 KNSTRNQ9Y448 316 aa23.38■■□□□ 1.33
AP1S3-203ENST00000396654 EMILIN1Q9Y6C2 1016 aa23.38■■□□□ 1.33
AP1S3-203ENST00000396654 CNGB1Q14028 1251 aaPredicted RBP23.37■■□□□ 1.33
AP1S3-203ENST00000396654 RTL1A6NKG5 1358 aa23.37■■□□□ 1.33
AP1S3-203ENST00000396654 HSP90AB2PQ58FF8 381 aa23.35■■□□□ 1.33
AP1S3-203ENST00000396654 DDB1Q16531 1140 aa23.34■■□□□ 1.33
AP1S3-203ENST00000396654 FLT4P35916 1363 aa23.34■■□□□ 1.33
AP1S3-203ENST00000396654 DISP2A7MBM2 1401 aa23.33■■□□□ 1.33
AP1S3-203ENST00000396654 MORC1Q86VD1 984 aa23.33■■□□□ 1.33
AP1S3-203ENST00000396654 RGPD1P0DJD0 1748 aa23.33■■□□□ 1.32
AP1S3-203ENST00000396654 NSD2O96028 1365 aa23.32■■□□□ 1.32
AP1S3-203ENST00000396654 USHBP1Q8N6Y0 703 aa23.31■■□□□ 1.32
AP1S3-203ENST00000396654 SMG6Q86US8 1419 aaKnown RBP23.31■■□□□ 1.32
AP1S3-203ENST00000396654 INSRP06213 1382 aa23.3■■□□□ 1.32
AP1S3-203ENST00000396654 SF3B2Q13435 895 aaKnown RBP23.3■■□□□ 1.32
AP1S3-203ENST00000396654 AMER1Q5JTC6 1135 aaPredicted RBP23.3■■□□□ 1.32
AP1S3-203ENST00000396654 CC2D1BQ5T0F9 858 aaKnown RBP23.3■■□□□ 1.32
AP1S3-203ENST00000396654 POLKQ9UBT6 870 aa23.3■■□□□ 1.32
AP1S3-203ENST00000396654 TNS1Q9HBL0 1735 aaKnown RBP23.3■■□□□ 1.32
AP1S3-203ENST00000396654 IL2RBP14784 551 aa23.29■■□□□ 1.32
AP1S3-203ENST00000396654 CDCA7Q9BWT1 371 aaPredicted RBP23.29■■□□□ 1.32
AP1S3-203ENST00000396654 SBF2Q86WG5 1849 aa23.29■■□□□ 1.32
AP1S3-203ENST00000396654 FAM196AQ6ZSG2 479 aa23.28■■□□□ 1.32
AP1S3-203ENST00000396654 DEFB132Q7Z7B7 95 aa23.28■■□□□ 1.32
AP1S3-203ENST00000396654 PER1O15534 1290 aaPredicted RBP23.27■■□□□ 1.32
AP1S3-203ENST00000396654 TRIM37O94972 964 aa23.27■■□□□ 1.32
AP1S3-203ENST00000396654 NBPF6Q5VWK0 638 aa23.27■■□□□ 1.32
AP1S3-203ENST00000396654 CCDC125Q86Z20 511 aa23.27■■□□□ 1.32
AP1S3-203ENST00000396654 NBPF4Q96M43 638 aa23.27■■□□□ 1.32
AP1S3-203ENST00000396654 KIF24Q5T7B8 1368 aa23.27■■□□□ 1.31
AP1S3-203ENST00000396654 TNS2Q63HR2 1409 aa23.26■■□□□ 1.31
AP1S3-203ENST00000396654 EXOC5O00471 708 aa23.26■■□□□ 1.31
AP1S3-203ENST00000396654 KAT6BQ8WYB5 2073 aa23.26■■□□□ 1.31
AP1S3-203ENST00000396654 ZEB1P37275 1124 aaPredicted RBP23.25■■□□□ 1.31
AP1S3-203ENST00000396654 MARCH10Q8NA82 808 aaPredicted RBP23.25■■□□□ 1.31
AP1S3-203ENST00000396654 OVOS2A0A0G2JMS6 1433 aa23.25■■□□□ 1.31
AP1S3-203ENST00000396654 EP400Q96L91 3159 aa23.24■■□□□ 1.31
AP1S3-203ENST00000396654 MEGF6O75095 1541 aa23.23■■□□□ 1.31
AP1S3-203ENST00000396654 SHANK3Q9BYB0 1731 aa23.22■■□□□ 1.31
AP1S3-203ENST00000396654 BAG6P46379 1132 aa23.2■■□□□ 1.3
AP1S3-203ENST00000396654 EIF4A2Q14240 407 aaKnown RBP23.19■■□□□ 1.3
AP1S3-203ENST00000396654 EN1Q05925 392 aaPredicted RBP23.18■■□□□ 1.3
AP1S3-203ENST00000396654 DDX54Q8TDD1 881 aaKnown RBP23.18■■□□□ 1.3
AP1S3-203ENST00000396654 APBA3O96018 575 aa23.17■■□□□ 1.3
AP1S3-203ENST00000396654 RAPGEF4Q8WZA2 1011 aa23.17■■□□□ 1.3
AP1S3-203ENST00000396654 PTF1AQ7RTS3 328 aa23.16■■□□□ 1.3
AP1S3-203ENST00000396654 EYA1Q99502 592 aa23.16■■□□□ 1.3
AP1S3-203ENST00000396654 TATP17735 454 aaPredicted RBP23.15■■□□□ 1.3
AP1S3-203ENST00000396654 ACSBG1Q96GR2 724 aa23.15■■□□□ 1.3
AP1S3-203ENST00000396654 MTHFSP49914 203 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms