RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 SBNO2Q9Y2G9 1366 aa24.25■■□□□ 1.47
TNFSF13-205ENST00000396545 TTC21AQ8NDW8 1320 aa24.23■■□□□ 1.47
TNFSF13-205ENST00000396545 LRRC37A3O60309 1634 aa24.23■■□□□ 1.47
TNFSF13-205ENST00000396545 AXIN2Q9Y2T1 843 aa24.23■■□□□ 1.47
TNFSF13-205ENST00000396545 PEAK1Q9H792 1746 aa24.23■■□□□ 1.47
TNFSF13-205ENST00000396545 EIF4G2P78344 907 aaKnown RBP eCLIP24.22■■□□□ 1.47
TNFSF13-205ENST00000396545 ARHGEF25Q86VW2 580 aa24.22■■□□□ 1.47
TNFSF13-205ENST00000396545 WDR17Q8IZU2 1322 aa24.21■■□□□ 1.47
TNFSF13-205ENST00000396545 OVOS2A0A0G2JMS6 1433 aa24.21■■□□□ 1.47
TNFSF13-205ENST00000396545 OVOS2A0A0J9YW53 1432 aa24.21■■□□□ 1.47
TNFSF13-205ENST00000396545 OVOS2Q6IE36 1432 aa24.21■■□□□ 1.47
TNFSF13-205ENST00000396545 C11orf95C9JLR9 678 aaPredicted RBP24.2■■□□□ 1.47
TNFSF13-205ENST00000396545 TOM1L2Q6ZVM7 507 aa24.2■■□□□ 1.47
TNFSF13-205ENST00000396545 KCNH5Q8NCM2 988 aa24.2■■□□□ 1.47
TNFSF13-205ENST00000396545 NUP188Q5SRE5 1749 aa24.2■■□□□ 1.47
TNFSF13-205ENST00000396545 NFAT5O94916 1531 aa24.2■■□□□ 1.47
TNFSF13-205ENST00000396545 KTN1Q86UP2 1357 aaKnown RBP24.2■■□□□ 1.46
TNFSF13-205ENST00000396545 MON2Q7Z3U7 1717 aa24.2■■□□□ 1.46
TNFSF13-205ENST00000396545 WNK3Q9BYP7 1800 aa24.19■■□□□ 1.46
TNFSF13-205ENST00000396545 HSPA5P11021 654 aaKnown RBP24.16■■□□□ 1.46
TNFSF13-205ENST00000396545 DDB1Q16531 1140 aa24.16■■□□□ 1.46
TNFSF13-205ENST00000396545 CARD11Q9BXL7 1154 aa24.16■■□□□ 1.46
TNFSF13-205ENST00000396545 SOX12O15370 315 aa24.16■■□□□ 1.46
TNFSF13-205ENST00000396545 CD163L1Q9NR16 1453 aa24.16■■□□□ 1.46
TNFSF13-205ENST00000396545 ABCC6O95255 1503 aa24.16■■□□□ 1.46
TNFSF13-205ENST00000396545 RGPD5Q99666 1765 aa24.16■■□□□ 1.46
TNFSF13-205ENST00000396545 CDCA7Q9BWT1 371 aaPredicted RBP24.14■■□□□ 1.45
TNFSF13-205ENST00000396545 SBF2Q86WG5 1849 aa24.14■■□□□ 1.45
TNFSF13-205ENST00000396545 USP54Q70EL1 1684 aa24.14■■□□□ 1.45
TNFSF13-205ENST00000396545 DDX10Q13206 875 aaKnown RBP24.13■■□□□ 1.45
TNFSF13-205ENST00000396545 CARD10Q9BWT7 1032 aa24.13■■□□□ 1.45
TNFSF13-205ENST00000396545 RGPD3A6NKT7 1758 aaPredicted RBP24.13■■□□□ 1.45
TNFSF13-205ENST00000396545 RGPD4Q7Z3J3 1758 aa24.13■■□□□ 1.45
TNFSF13-205ENST00000396545 USP31Q70CQ4 1352 aa24.13■■□□□ 1.45
TNFSF13-205ENST00000396545 BCL9O00512 1426 aa24.11■■□□□ 1.45
TNFSF13-205ENST00000396545 NBPF14Q5TI25 921 aa24.11■■□□□ 1.45
TNFSF13-205ENST00000396545 CSB-PGBD3P0DP91 1061 aa24.1■■□□□ 1.45
TNFSF13-205ENST00000396545 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.1■■□□□ 1.45
TNFSF13-205ENST00000396545 MARCH10Q8NA82 808 aaPredicted RBP24.09■■□□□ 1.45
TNFSF13-205ENST00000396545 PLSCR1O15162 318 aa24.08■■□□□ 1.44
TNFSF13-205ENST00000396545 NME9Q86XW9 330 aa24.08■■□□□ 1.44
TNFSF13-205ENST00000396545 BCL11BQ9C0K0 894 aaPredicted RBP24.08■■□□□ 1.44
TNFSF13-205ENST00000396545 USP47Q96K76 1375 aa24.07■■□□□ 1.44
TNFSF13-205ENST00000396545 CCDC7Q96M83 1385 aa24.07■■□□□ 1.44
TNFSF13-205ENST00000396545 CENPBP07199 599 aaPredicted RBP24.07■■□□□ 1.44
TNFSF13-205ENST00000396545 PTF1AQ7RTS3 328 aa24.07■■□□□ 1.44
TNFSF13-205ENST00000396545 TMC1Q8TDI8 760 aa24.07■■□□□ 1.44
TNFSF13-205ENST00000396545 EDC4Q6P2E9 1401 aaKnown RBP24.06■■□□□ 1.44
TNFSF13-205ENST00000396545 SLC12A5Q9H2X9 1139 aa24.06■■□□□ 1.44
TNFSF13-205ENST00000396545 HDGFL2Q7Z4V5 671 aaPredicted RBP24.05■■□□□ 1.44
TNFSF13-205ENST00000396545 A0A1W2PP64 1363 aa24.04■■□□□ 1.44
TNFSF13-205ENST00000396545 PUS7Q96PZ0 661 aaKnown RBP24.04■■□□□ 1.44
TNFSF13-205ENST00000396545 ERBB3P21860 1342 aa24.04■■□□□ 1.44
TNFSF13-205ENST00000396545 LTN1O94822 1766 aa24.03■■□□□ 1.44
TNFSF13-205ENST00000396545 TNS2Q63HR2 1409 aa24.03■■□□□ 1.44
TNFSF13-205ENST00000396545 WASHC2AQ641Q2 1341 aa24.02■■□□□ 1.44
TNFSF13-205ENST00000396545 EXOC5O00471 708 aa24.02■■□□□ 1.44
TNFSF13-205ENST00000396545 TERF2IPQ9NYB0 399 aa24.02■■□□□ 1.44
TNFSF13-205ENST00000396545 PROM2Q8N271 834 aa23.99■■□□□ 1.43
TNFSF13-205ENST00000396545 TESK2Q96S53 571 aa23.99■■□□□ 1.43
TNFSF13-205ENST00000396545 ANO8Q9HCE9 1232 aaPredicted RBP23.99■■□□□ 1.43
TNFSF13-205ENST00000396545 NLRP2Q9NX02 1062 aa23.98■■□□□ 1.43
TNFSF13-205ENST00000396545 NINLQ9Y2I6 1382 aa23.98■■□□□ 1.43
TNFSF13-205ENST00000396545 SPON1Q9HCB6 807 aa23.97■■□□□ 1.43
TNFSF13-205ENST00000396545 CASZ1Q86V15 1759 aa23.96■■□□□ 1.43
TNFSF13-205ENST00000396545 ST20-MTHFSA0A0A6YYL1 179 aa23.95■■□□□ 1.43
TNFSF13-205ENST00000396545 KCNQ2O43526 872 aa23.95■■□□□ 1.43
TNFSF13-205ENST00000396545 ANKRD24Q8TF21 1146 aa23.95■■□□□ 1.43
TNFSF13-205ENST00000396545 NHSQ6T4R5 1651 aa23.95■■□□□ 1.42
TNFSF13-205ENST00000396545 IL2RBP14784 551 aa23.94■■□□□ 1.42
TNFSF13-205ENST00000396545 YTHDC1Q96MU7 727 aaKnown RBP23.93■■□□□ 1.42
TNFSF13-205ENST00000396545 TXNRD1Q16881 649 aa23.92■■□□□ 1.42
TNFSF13-205ENST00000396545 ANP32CO43423 234 aa23.91■■□□□ 1.42
TNFSF13-205ENST00000396545 SLC24A1O60721 1099 aa23.91■■□□□ 1.42
TNFSF13-205ENST00000396545 IP6K1Q92551 441 aa23.9■■□□□ 1.42
TNFSF13-205ENST00000396545 PPP1R1BQ9UD71 204 aaPredicted RBP23.9■■□□□ 1.42
TNFSF13-205ENST00000396545 CCER2I3L3R5 266 aa23.89■■□□□ 1.41
TNFSF13-205ENST00000396545 PDGFDQ9GZP0 370 aaPredicted RBP23.89■■□□□ 1.41
TNFSF13-205ENST00000396545 FAM208AQ9UK61 1670 aaKnown RBP23.88■■□□□ 1.41
TNFSF13-205ENST00000396545 KIF7Q2M1P5 1343 aa23.88■■□□□ 1.41
TNFSF13-205ENST00000396545 ACSBG1Q96GR2 724 aa23.87■■□□□ 1.41
TNFSF13-205ENST00000396545 COG3Q96JB2 828 aa23.86■■□□□ 1.41
TNFSF13-205ENST00000396545 ANKRD36BQ8N2N9 1353 aa23.86■■□□□ 1.41
TNFSF13-205ENST00000396545 STK32BQ9NY57 414 aa23.86■■□□□ 1.41
TNFSF13-205ENST00000396545 MAP3K19Q56UN5 1328 aa23.85■■□□□ 1.41
TNFSF13-205ENST00000396545 SLC15A2Q16348 729 aa23.85■■□□□ 1.41
TNFSF13-205ENST00000396545 BTAF1O14981 1849 aa23.84■■□□□ 1.41
TNFSF13-205ENST00000396545 PAPPAQ13219 1627 aa23.83■■□□□ 1.41
TNFSF13-205ENST00000396545 ZBTB7AO95365 584 aa23.82■■□□□ 1.4
TNFSF13-205ENST00000396545 HOXC9P31274 260 aa23.82■■□□□ 1.4
TNFSF13-205ENST00000396545 LTV1Q96GA3 475 aaPredicted RBP23.82■■□□□ 1.4
TNFSF13-205ENST00000396545 FBLN1P23142 703 aa23.81■■□□□ 1.4
TNFSF13-205ENST00000396545 PTGER2P43116 358 aa23.81■■□□□ 1.4
TNFSF13-205ENST00000396545 TMF1P82094 1093 aa23.8■■□□□ 1.4
TNFSF13-205ENST00000396545 MYOM1P52179 1685 aa23.79■■□□□ 1.4
TNFSF13-205ENST00000396545 RTL1A6NKG5 1358 aa23.79■■□□□ 1.4
TNFSF13-205ENST00000396545 AMPHP49418 695 aa23.78■■□□□ 1.4
TNFSF13-205ENST00000396545 KAT6BQ8WYB5 2073 aa23.77■■□□□ 1.4
TNFSF13-205ENST00000396545 FYB1O15117 783 aa23.77■■□□□ 1.4
TNFSF13-205ENST00000396545 CDCA8Q53HL2 280 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms