RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 CRB1P82279 1406 aa24.35■■□□□ 1.49
UPK3A-202ENST00000396082 LTN1O94822 1766 aa24.34■■□□□ 1.49
UPK3A-202ENST00000396082 TOM1L2Q6ZVM7 507 aa24.34■■□□□ 1.49
UPK3A-202ENST00000396082 CCDC125Q86Z20 511 aa24.34■■□□□ 1.49
UPK3A-202ENST00000396082 POLR3GLQ9BT43 218 aa24.34■■□□□ 1.49
UPK3A-202ENST00000396082 OVOS2A0A0J9YW53 1432 aa24.34■■□□□ 1.49
UPK3A-202ENST00000396082 OVOS2Q6IE36 1432 aa24.34■■□□□ 1.49
UPK3A-202ENST00000396082 CSB-PGBD3P0DP91 1061 aa24.33■■□□□ 1.49
UPK3A-202ENST00000396082 HSPA5P11021 654 aaKnown RBP24.33■■□□□ 1.49
UPK3A-202ENST00000396082 BARGINQ6ZT62 677 aa24.33■■□□□ 1.49
UPK3A-202ENST00000396082 COG3Q96JB2 828 aa24.33■■□□□ 1.49
UPK3A-202ENST00000396082 MYOM1P52179 1685 aa24.33■■□□□ 1.49
UPK3A-202ENST00000396082 ABCC6O95255 1503 aa24.32■■□□□ 1.48
UPK3A-202ENST00000396082 AXIN2Q9Y2T1 843 aa24.32■■□□□ 1.48
UPK3A-202ENST00000396082 THRAP3Q9Y2W1 955 aaKnown RBP24.32■■□□□ 1.48
UPK3A-202ENST00000396082 BLMP54132 1417 aaPredicted RBP24.31■■□□□ 1.48
UPK3A-202ENST00000396082 WDR17Q8IZU2 1322 aa24.31■■□□□ 1.48
UPK3A-202ENST00000396082 SF3B2Q13435 895 aaKnown RBP24.3■■□□□ 1.48
UPK3A-202ENST00000396082 KIF20BQ96Q89 1820 aa24.27■■□□□ 1.48
UPK3A-202ENST00000396082 PDE3BQ13370 1112 aa24.27■■□□□ 1.48
UPK3A-202ENST00000396082 FAM182BQ5T319 152 aa24.27■■□□□ 1.48
UPK3A-202ENST00000396082 EP400Q96L91 3159 aa24.25■■□□□ 1.47
UPK3A-202ENST00000396082 GGNBP2Q9H3C7 697 aa24.25■■□□□ 1.47
UPK3A-202ENST00000396082 PARP4Q9UKK3 1724 aaKnown RBP24.24■■□□□ 1.47
UPK3A-202ENST00000396082 NSD3Q9BZ95 1437 aa24.24■■□□□ 1.47
UPK3A-202ENST00000396082 WNK3Q9BYP7 1800 aa24.24■■□□□ 1.47
UPK3A-202ENST00000396082 FYB1O15117 783 aa24.23■■□□□ 1.47
UPK3A-202ENST00000396082 RGPD1P0DJD0 1748 aa24.21■■□□□ 1.47
UPK3A-202ENST00000396082 ERBB3P21860 1342 aa24.21■■□□□ 1.47
UPK3A-202ENST00000396082 CARD10Q9BWT7 1032 aa24.21■■□□□ 1.47
UPK3A-202ENST00000396082 CCDC7Q96M83 1385 aa24.2■■□□□ 1.46
UPK3A-202ENST00000396082 FAM196AQ6ZSG2 479 aa24.2■■□□□ 1.46
UPK3A-202ENST00000396082 LRRC37A3O60309 1634 aa24.2■■□□□ 1.46
UPK3A-202ENST00000396082 AMPHP49418 695 aa24.19■■□□□ 1.46
UPK3A-202ENST00000396082 ANKRD24Q8TF21 1146 aa24.19■■□□□ 1.46
UPK3A-202ENST00000396082 CDCA7Q9BWT1 371 aaPredicted RBP24.19■■□□□ 1.46
UPK3A-202ENST00000396082 CARD14Q9BXL6 1004 aa24.19■■□□□ 1.46
UPK3A-202ENST00000396082 NLRP2Q9NX02 1062 aa24.19■■□□□ 1.46
UPK3A-202ENST00000396082 MAP3K19Q56UN5 1328 aa24.18■■□□□ 1.46
UPK3A-202ENST00000396082 DDB1Q16531 1140 aa24.18■■□□□ 1.46
UPK3A-202ENST00000396082 DEFB132Q7Z7B7 95 aa24.18■■□□□ 1.46
UPK3A-202ENST00000396082 IP6K1Q92551 441 aa24.18■■□□□ 1.46
UPK3A-202ENST00000396082 FBLN1P23142 703 aa24.17■■□□□ 1.46
UPK3A-202ENST00000396082 BAG6P46379 1132 aa24.17■■□□□ 1.46
UPK3A-202ENST00000396082 LTV1Q96GA3 475 aaPredicted RBP24.16■■□□□ 1.46
UPK3A-202ENST00000396082 CGNL1Q0VF96 1302 aa24.15■■□□□ 1.46
UPK3A-202ENST00000396082 FAM208AQ9UK61 1670 aaKnown RBP24.15■■□□□ 1.46
UPK3A-202ENST00000396082 RRS1Q15050 365 aaKnown RBP24.14■■□□□ 1.45
UPK3A-202ENST00000396082 TNS1Q9HBL0 1735 aaKnown RBP24.13■■□□□ 1.45
UPK3A-202ENST00000396082 TRIM37O94972 964 aa24.13■■□□□ 1.45
UPK3A-202ENST00000396082 HOXC9P31274 260 aa24.13■■□□□ 1.45
UPK3A-202ENST00000396082 RTL1A6NKG5 1358 aa24.13■■□□□ 1.45
UPK3A-202ENST00000396082 OVOS2A0A0G2JMS6 1433 aa24.12■■□□□ 1.45
UPK3A-202ENST00000396082 DISP2A7MBM2 1401 aa24.12■■□□□ 1.45
UPK3A-202ENST00000396082 C11orf95C9JLR9 678 aaPredicted RBP24.11■■□□□ 1.45
UPK3A-202ENST00000396082 PANK3Q9H999 370 aa24.1■■□□□ 1.45
UPK3A-202ENST00000396082 EXOC5O00471 708 aa24.09■■□□□ 1.45
UPK3A-202ENST00000396082 IL2RBP14784 551 aa24.08■■□□□ 1.45
UPK3A-202ENST00000396082 EN1Q05925 392 aaPredicted RBP24.08■■□□□ 1.45
UPK3A-202ENST00000396082 TNS2Q63HR2 1409 aa24.08■■□□□ 1.44
UPK3A-202ENST00000396082 SMG6Q86US8 1419 aaKnown RBP24.08■■□□□ 1.44
UPK3A-202ENST00000396082 PEAK1Q9H792 1746 aa24.07■■□□□ 1.44
UPK3A-202ENST00000396082 ANKRD26Q9UPS8 1709 aa24.07■■□□□ 1.44
UPK3A-202ENST00000396082 APBA3O96018 575 aa24.06■■□□□ 1.44
UPK3A-202ENST00000396082 FLT4P35916 1363 aa24.05■■□□□ 1.44
UPK3A-202ENST00000396082 RGPD2P0DJD1 1756 aa24.05■■□□□ 1.44
UPK3A-202ENST00000396082 KIF7Q2M1P5 1343 aa24.05■■□□□ 1.44
UPK3A-202ENST00000396082 MARCH10Q8NA82 808 aaPredicted RBP24.04■■□□□ 1.44
UPK3A-202ENST00000396082 KIF24Q5T7B8 1368 aa24.03■■□□□ 1.44
UPK3A-202ENST00000396082 PPM1GO15355 546 aaPredicted RBP24.03■■□□□ 1.44
UPK3A-202ENST00000396082 SBF2Q86WG5 1849 aa24.03■■□□□ 1.44
UPK3A-202ENST00000396082 HSP90AB2PQ58FF8 381 aa24.02■■□□□ 1.44
UPK3A-202ENST00000396082 EMILIN1Q9Y6C2 1016 aa24.02■■□□□ 1.44
UPK3A-202ENST00000396082 INSRP06213 1382 aa24.02■■□□□ 1.44
UPK3A-202ENST00000396082 MAP2P11137 1827 aaKnown RBP24.01■■□□□ 1.43
UPK3A-202ENST00000396082 NSD2O96028 1365 aa24.01■■□□□ 1.43
UPK3A-202ENST00000396082 TNNT2P45379 298 aaPredicted RBP24■■□□□ 1.43
UPK3A-202ENST00000396082 EZH2Q15910 746 aaKnown RBP24■■□□□ 1.43
UPK3A-202ENST00000396082 KNSTRNQ9Y448 316 aa24■■□□□ 1.43
UPK3A-202ENST00000396082 PARD3Q8TEW0 1356 aa23.98■■□□□ 1.43
UPK3A-202ENST00000396082 BCL9O00512 1426 aa23.97■■□□□ 1.43
UPK3A-202ENST00000396082 NBPF6Q5VWK0 638 aa23.96■■□□□ 1.43
UPK3A-202ENST00000396082 USHBP1Q8N6Y0 703 aa23.96■■□□□ 1.43
UPK3A-202ENST00000396082 NBPF4Q96M43 638 aa23.96■■□□□ 1.43
UPK3A-202ENST00000396082 CAMKK2Q96RR4 588 aa23.96■■□□□ 1.43
UPK3A-202ENST00000396082 BCL11BQ9C0K0 894 aaPredicted RBP23.95■■□□□ 1.42
UPK3A-202ENST00000396082 MORC1Q86VD1 984 aa23.94■■□□□ 1.42
UPK3A-202ENST00000396082 RAPGEF4Q8WZA2 1011 aa23.94■■□□□ 1.42
UPK3A-202ENST00000396082 MEGF6O75095 1541 aa23.94■■□□□ 1.42
UPK3A-202ENST00000396082 DDX54Q8TDD1 881 aaKnown RBP23.93■■□□□ 1.42
UPK3A-202ENST00000396082 POLKQ9UBT6 870 aa23.93■■□□□ 1.42
UPK3A-202ENST00000396082 KAT6BQ8WYB5 2073 aa23.93■■□□□ 1.42
UPK3A-202ENST00000396082 RREB1Q92766 1687 aa23.92■■□□□ 1.42
UPK3A-202ENST00000396082 WASHC2AQ641Q2 1341 aa23.92■■□□□ 1.42
UPK3A-202ENST00000396082 ACSBG1Q96GR2 724 aa23.91■■□□□ 1.42
UPK3A-202ENST00000396082 NHSQ6T4R5 1651 aa23.91■■□□□ 1.42
UPK3A-202ENST00000396082 PSDA5PKW4 1024 aaPredicted RBP23.9■■□□□ 1.42
UPK3A-202ENST00000396082 TATP17735 454 aaPredicted RBP23.9■■□□□ 1.42
UPK3A-202ENST00000396082 PTF1AQ7RTS3 328 aa23.9■■□□□ 1.42
UPK3A-202ENST00000396082 ZCRB1Q8TBF4 217 aaKnown RBP23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms