RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 HMGN5P82970 282 aaKnown RBP20.65■□□□□ 0.9
UBFD1-201ENST00000395878 CAGE1Q8TC20 777 aa20.65■□□□□ 0.9
UBFD1-201ENST00000395878 CCDC192P0DO97 292 aa20.64■□□□□ 0.89
UBFD1-201ENST00000395878 SAMD1Q6SPF0 538 aaPredicted RBP20.64■□□□□ 0.89
UBFD1-201ENST00000395878 MTMR7Q9Y216 660 aa20.64■□□□□ 0.89
UBFD1-201ENST00000395878 KDM4AO75164 1064 aa20.64■□□□□ 0.89
UBFD1-201ENST00000395878 ODF2Q5BJF6 829 aa20.64■□□□□ 0.89
UBFD1-201ENST00000395878 TOP2BQ02880 1626 aa20.63■□□□□ 0.89
UBFD1-201ENST00000395878 CIZ1Q9ULV3 898 aaPredicted RBP20.63■□□□□ 0.89
UBFD1-201ENST00000395878 RRP12Q5JTH9 1297 aaKnown RBP20.63■□□□□ 0.89
UBFD1-201ENST00000395878 MRC2Q9UBG0 1479 aa20.63■□□□□ 0.89
UBFD1-201ENST00000395878 FMNL2Q96PY5 1086 aa20.63■□□□□ 0.89
UBFD1-201ENST00000395878 SUPT6HQ7KZ85 1726 aaKnown RBP20.62■□□□□ 0.89
UBFD1-201ENST00000395878 PATL2C9JE40 543 aaKnown RBP20.62■□□□□ 0.89
UBFD1-201ENST00000395878 RPAP2Q8IXW5 612 aaPredicted RBP20.62■□□□□ 0.89
UBFD1-201ENST00000395878 MAGEC2Q9UBF1 373 aaPredicted RBP20.62■□□□□ 0.89
UBFD1-201ENST00000395878 FAM177BA6PVY3 158 aa20.62■□□□□ 0.89
UBFD1-201ENST00000395878 CABP4P57796 275 aa20.62■□□□□ 0.89
UBFD1-201ENST00000395878 KRT85P78386 507 aa20.62■□□□□ 0.89
UBFD1-201ENST00000395878 CDK5RAP3Q96JB5 506 aa20.62■□□□□ 0.89
UBFD1-201ENST00000395878 NACAP1Q9BZK3 213 aa20.62■□□□□ 0.89
UBFD1-201ENST00000395878 SPG7Q9UQ90 795 aa20.62■□□□□ 0.89
UBFD1-201ENST00000395878 IKQ13123 557 aaPredicted RBP20.61■□□□□ 0.89
UBFD1-201ENST00000395878 TRIM22Q8IYM9 498 aa20.61■□□□□ 0.89
UBFD1-201ENST00000395878 NOM1Q5C9Z4 860 aaKnown RBP20.6■□□□□ 0.89
UBFD1-201ENST00000395878 SLFN5Q08AF3 891 aa20.6■□□□□ 0.89
UBFD1-201ENST00000395878 CEBPZQ03701 1054 aaKnown RBP20.6■□□□□ 0.89
UBFD1-201ENST00000395878 ZSCAN25Q6NSZ9 544 aa20.6■□□□□ 0.89
UBFD1-201ENST00000395878 ZSCAN31Q96LW9 406 aaPredicted RBP20.6■□□□□ 0.89
UBFD1-201ENST00000395878 SIL1Q9H173 461 aa20.59■□□□□ 0.89
UBFD1-201ENST00000395878 TNMDQ9H2S6 317 aa20.59■□□□□ 0.89
UBFD1-201ENST00000395878 NFE2L2Q16236 605 aa20.59■□□□□ 0.89
UBFD1-201ENST00000395878 LARP1BQ659C4 914 aaKnown RBP20.58■□□□□ 0.89
UBFD1-201ENST00000395878 DACH1Q9UI36 760 aa20.58■□□□□ 0.89
UBFD1-201ENST00000395878 MYO6Q9UM54 1294 aa20.58■□□□□ 0.89
UBFD1-201ENST00000395878 WDR97A6NE52 1622 aa20.58■□□□□ 0.89
UBFD1-201ENST00000395878 SRGAP3O43295 1099 aa20.58■□□□□ 0.88
UBFD1-201ENST00000395878 BLOC1S2Q6QNY1 142 aa20.58■□□□□ 0.88
UBFD1-201ENST00000395878 TOPBP1Q92547 1522 aa20.58■□□□□ 0.88
UBFD1-201ENST00000395878 STK3Q13188 491 aa20.57■□□□□ 0.88
UBFD1-201ENST00000395878 CCDC184Q52MB2 194 aa20.57■□□□□ 0.88
UBFD1-201ENST00000395878 TTLL5Q6EMB2 1281 aa20.57■□□□□ 0.88
UBFD1-201ENST00000395878 AACSQ86V21 672 aa20.57■□□□□ 0.88
UBFD1-201ENST00000395878 BRPF3Q9ULD4 1205 aa20.57■□□□□ 0.88
UBFD1-201ENST00000395878 CCAR1Q8IX12 1150 aaKnown RBP20.57■□□□□ 0.88
UBFD1-201ENST00000395878 PDIA4P13667 645 aaKnown RBP20.57■□□□□ 0.88
UBFD1-201ENST00000395878 ME1P48163 572 aa20.57■□□□□ 0.88
UBFD1-201ENST00000395878 STRN4Q9NRL3 753 aa20.57■□□□□ 0.88
UBFD1-201ENST00000395878 NSD3Q9BZ95 1437 aa20.56■□□□□ 0.88
UBFD1-201ENST00000395878 TMPOP42166 694 aaKnown RBP20.56■□□□□ 0.88
UBFD1-201ENST00000395878 HSP90AB2PQ58FF8 381 aa20.56■□□□□ 0.88
UBFD1-201ENST00000395878 GRPEL1Q9HAV7 217 aa20.56■□□□□ 0.88
UBFD1-201ENST00000395878 KRT32Q14532 448 aa20.55■□□□□ 0.88
UBFD1-201ENST00000395878 CCDC57Q2TAC2 916 aa20.55■□□□□ 0.88
UBFD1-201ENST00000395878 PDRG1Q9NUG6 133 aa20.55■□□□□ 0.88
UBFD1-201ENST00000395878 SERPINC1P01008 464 aa20.55■□□□□ 0.88
UBFD1-201ENST00000395878 POLA1P09884 1462 aaPredicted RBP20.55■□□□□ 0.88
UBFD1-201ENST00000395878 RDXP35241 583 aaKnown RBP20.55■□□□□ 0.88
UBFD1-201ENST00000395878 MAP4K4O95819 1239 aaPredicted RBP20.55■□□□□ 0.88
UBFD1-201ENST00000395878 SPC24Q8NBT2 197 aa20.55■□□□□ 0.88
UBFD1-201ENST00000395878 CTNNA3Q9UI47 895 aa20.55■□□□□ 0.88
UBFD1-201ENST00000395878 NAIPQ13075 1403 aa20.55■□□□□ 0.88
UBFD1-201ENST00000395878 CCDC69A6NI79 296 aa20.54■□□□□ 0.88
UBFD1-201ENST00000395878 ZNHIT6Q9NWK9 470 aaKnown RBP20.54■□□□□ 0.88
UBFD1-201ENST00000395878 PRKCSHP14314 528 aaPredicted RBP20.54■□□□□ 0.88
UBFD1-201ENST00000395878 BCL11BQ9C0K0 894 aaPredicted RBP20.54■□□□□ 0.88
UBFD1-201ENST00000395878 CDKL5O76039 1030 aa20.54■□□□□ 0.88
UBFD1-201ENST00000395878 BRPF1P55201 1214 aaPredicted RBP20.54■□□□□ 0.88
UBFD1-201ENST00000395878 RRS1Q15050 365 aaKnown RBP20.54■□□□□ 0.88
UBFD1-201ENST00000395878 ZFYVE27Q5T4F4 411 aa20.54■□□□□ 0.88
UBFD1-201ENST00000395878 CWC15Q9P013 229 aaKnown RBP20.54■□□□□ 0.88
UBFD1-201ENST00000395878 TOM1L2Q6ZVM7 507 aa20.53■□□□□ 0.88
UBFD1-201ENST00000395878 PPP6R1Q9UPN7 881 aa20.53■□□□□ 0.88
UBFD1-201ENST00000395878 KRT18P05783 430 aaKnown RBP20.53■□□□□ 0.88
UBFD1-201ENST00000395878 MCM4P33991 863 aa20.53■□□□□ 0.88
UBFD1-201ENST00000395878 IL27Q8NEV9 243 aa20.53■□□□□ 0.88
UBFD1-201ENST00000395878 MYL6BP14649 208 aa20.53■□□□□ 0.88
UBFD1-201ENST00000395878 DCTN1Q14203 1278 aa20.53■□□□□ 0.88
UBFD1-201ENST00000395878 BTBD11A6QL63 1104 aa20.52■□□□□ 0.88
UBFD1-201ENST00000395878 STIM1Q13586 685 aa20.52■□□□□ 0.88
UBFD1-201ENST00000395878 TMEM57Q8N5G2 664 aa20.52■□□□□ 0.88
UBFD1-201ENST00000395878 CFAP45Q9UL16 551 aa20.52■□□□□ 0.88
UBFD1-201ENST00000395878 JAKMIP1Q96N16 626 aaKnown RBP20.52■□□□□ 0.88
UBFD1-201ENST00000395878 PPFIBP1Q86W92 1011 aa20.51■□□□□ 0.87
UBFD1-201ENST00000395878 SPATA32Q96LK8 384 aa20.51■□□□□ 0.87
UBFD1-201ENST00000395878 CEP126Q9P2H0 1117 aa20.51■□□□□ 0.87
UBFD1-201ENST00000395878 SNAPC4Q5SXM2 1469 aa20.51■□□□□ 0.87
UBFD1-201ENST00000395878 MPHOSPH8Q99549 860 aa20.51■□□□□ 0.87
UBFD1-201ENST00000395878 NOL7Q9UMY1 257 aaKnown RBP20.51■□□□□ 0.87
UBFD1-201ENST00000395878 CBFA2T2O43439 604 aa20.51■□□□□ 0.87
UBFD1-201ENST00000395878 CWC27Q6UX04 472 aaKnown RBP20.5■□□□□ 0.87
UBFD1-201ENST00000395878 CCDC141Q6ZP82 1450 aa20.5■□□□□ 0.87
UBFD1-201ENST00000395878 NESP48681 1621 aa20.5■□□□□ 0.87
UBFD1-201ENST00000395878 EPRSP07814 1512 aaKnown RBP20.5■□□□□ 0.87
UBFD1-201ENST00000395878 IL1RAPL2Q9NP60 686 aa20.5■□□□□ 0.87
UBFD1-201ENST00000395878 DDX54Q8TDD1 881 aaKnown RBP20.5■□□□□ 0.87
UBFD1-201ENST00000395878 CCDC61Q9Y6R9 512 aa20.5■□□□□ 0.87
UBFD1-201ENST00000395878 LUC7LQ9NQ29 371 aaKnown RBP20.49■□□□□ 0.87
UBFD1-201ENST00000395878 ABCC11Q96J66 1382 aa20.49■□□□□ 0.87
UBFD1-201ENST00000395878 GNAT3A8MTJ3 354 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms