RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 U2SURPO15042 1029 aaKnown RBP32.38■■■□□ 2.77
LRFN4-202ENST00000393952 IP6K1Q92551 441 aa32.38■■■□□ 2.77
LRFN4-202ENST00000393952 EIF4A2Q14240 407 aaKnown RBP32.37■■■□□ 2.77
LRFN4-202ENST00000393952 HAP1P54257 671 aaPredicted RBP32.36■■■□□ 2.77
LRFN4-202ENST00000393952 U2AF1L5P0DN76 240 aaPredicted RBP32.36■■■□□ 2.77
LRFN4-202ENST00000393952 U2AF1Q01081 240 aaKnown RBP eCLIP32.36■■■□□ 2.77
LRFN4-202ENST00000393952 BLMP54132 1417 aaPredicted RBP32.36■■■□□ 2.77
LRFN4-202ENST00000393952 CPDO75976 1380 aa32.35■■■□□ 2.77
LRFN4-202ENST00000393952 KIAA0232Q92628 1395 aa32.35■■■□□ 2.77
LRFN4-202ENST00000393952 COL18A1P39060 1754 aa32.33■■■□□ 2.77
LRFN4-202ENST00000393952 RGPD5Q99666 1765 aa32.32■■■□□ 2.76
LRFN4-202ENST00000393952 HNRNPUQ00839 825 aaKnown RBP eCLIP32.31■■■□□ 2.76
LRFN4-202ENST00000393952 CHRNA2Q15822 529 aa32.3■■■□□ 2.76
LRFN4-202ENST00000393952 LTV1Q96GA3 475 aaPredicted RBP32.3■■■□□ 2.76
LRFN4-202ENST00000393952 RGPD1P0DJD0 1748 aa32.3■■■□□ 2.76
LRFN4-202ENST00000393952 CCDC146Q8IYE0 955 aa32.29■■■□□ 2.76
LRFN4-202ENST00000393952 AXIN2Q9Y2T1 843 aa32.29■■■□□ 2.76
LRFN4-202ENST00000393952 ABCC6O95255 1503 aa32.28■■■□□ 2.76
LRFN4-202ENST00000393952 PRDM11Q9NQV5 511 aa32.27■■■□□ 2.76
LRFN4-202ENST00000393952 SENP3-EIF4A1A0A087X0R7 540 aa32.26■■■□□ 2.75
LRFN4-202ENST00000393952 HSPA1LP34931 641 aa32.24■■■□□ 2.75
LRFN4-202ENST00000393952 HMOX1P09601 288 aa32.24■■■□□ 2.75
LRFN4-202ENST00000393952 JCADQ9P266 1359 aa32.23■■■□□ 2.75
LRFN4-202ENST00000393952 LMO7Q8WWI1 1683 aa32.22■■■□□ 2.75
LRFN4-202ENST00000393952 ANKRD24Q8TF21 1146 aa32.22■■■□□ 2.75
LRFN4-202ENST00000393952 EYA1Q99502 592 aa32.22■■■□□ 2.75
LRFN4-202ENST00000393952 RGPD2P0DJD1 1756 aa32.21■■■□□ 2.75
LRFN4-202ENST00000393952 IGSF1Q8N6C5 1336 aa32.2■■■□□ 2.75
LRFN4-202ENST00000393952 RUNDC1Q96C34 613 aa32.2■■■□□ 2.75
LRFN4-202ENST00000393952 RSPH6AQ9H0K4 717 aa32.2■■■□□ 2.75
LRFN4-202ENST00000393952 FCHSD2O94868 740 aa32.19■■■□□ 2.74
LRFN4-202ENST00000393952 AEBP1Q8IUX7 1158 aa32.19■■■□□ 2.74
LRFN4-202ENST00000393952 FAM83GA6ND36 823 aa32.19■■■□□ 2.74
LRFN4-202ENST00000393952 SULT6B1Q6IMI4 303 aa32.19■■■□□ 2.74
LRFN4-202ENST00000393952 CAMTA1Q9Y6Y1 1673 aa32.18■■■□□ 2.74
LRFN4-202ENST00000393952 PLEKHF1Q96S99 279 aa32.18■■■□□ 2.74
LRFN4-202ENST00000393952 ERBB3P21860 1342 aa32.17■■■□□ 2.74
LRFN4-202ENST00000393952 NUTM2BA6NNL0 878 aaPredicted RBP32.17■■■□□ 2.74
LRFN4-202ENST00000393952 NUTM2EB1AL46 878 aaPredicted RBP32.17■■■□□ 2.74
LRFN4-202ENST00000393952 NUTM2AQ8IVF1 878 aaPredicted RBP32.17■■■□□ 2.74
LRFN4-202ENST00000393952 PRKAR2BP31323 418 aa32.16■■■□□ 2.74
LRFN4-202ENST00000393952 COL14A1Q05707 1796 aaKnown RBP32.16■■■□□ 2.74
LRFN4-202ENST00000393952 APAF1O14727 1248 aa32.15■■■□□ 2.74
LRFN4-202ENST00000393952 NBPF6Q5VWK0 638 aa32.15■■■□□ 2.74
LRFN4-202ENST00000393952 NBPF4Q96M43 638 aa32.15■■■□□ 2.74
LRFN4-202ENST00000393952 PNNQ9H307 717 aaKnown RBP32.15■■■□□ 2.74
LRFN4-202ENST00000393952 ADAMTS2O95450 1211 aa32.13■■■□□ 2.73
LRFN4-202ENST00000393952 USHBP1Q8N6Y0 703 aa32.13■■■□□ 2.73
LRFN4-202ENST00000393952 KDRP35968 1356 aa32.13■■■□□ 2.73
LRFN4-202ENST00000393952 SALL2Q9Y467 1007 aaPredicted RBP32.12■■■□□ 2.73
LRFN4-202ENST00000393952 FAM208AQ9UK61 1670 aaKnown RBP32.12■■■□□ 2.73
LRFN4-202ENST00000393952 ZBED9Q6R2W3 1325 aa32.11■■■□□ 2.73
LRFN4-202ENST00000393952 MAPK8IP3Q9UPT6 1336 aa32.11■■■□□ 2.73
LRFN4-202ENST00000393952 TCP11L2Q8N4U5 519 aa32.11■■■□□ 2.73
LRFN4-202ENST00000393952 COL5A2P05997 1499 aaPredicted RBP32.1■■■□□ 2.73
LRFN4-202ENST00000393952 CSB-PGBD3P0DP91 1061 aa32.1■■■□□ 2.73
LRFN4-202ENST00000393952 PHACTR3Q96KR7 559 aa32.08■■■□□ 2.73
LRFN4-202ENST00000393952 NCAPD2Q15021 1401 aa32.08■■■□□ 2.73
LRFN4-202ENST00000393952 SPATA31A6Q5VVP1 1343 aa32.07■■■□□ 2.72
LRFN4-202ENST00000393952 PLCH1Q4KWH8 1693 aa32.07■■■□□ 2.72
LRFN4-202ENST00000393952 NLRP2Q9NX02 1062 aa32.07■■■□□ 2.72
LRFN4-202ENST00000393952 RRP7AQ9Y3A4 280 aaKnown RBP32.07■■■□□ 2.72
LRFN4-202ENST00000393952 NEFMP07197 916 aa32.06■■■□□ 2.72
LRFN4-202ENST00000393952 BTG4Q9NY30 223 aa32.06■■■□□ 2.72
LRFN4-202ENST00000393952 WDR17Q8IZU2 1322 aa32.05■■■□□ 2.72
LRFN4-202ENST00000393952 NEUROD2Q15784 382 aa32.03■■■□□ 2.72
LRFN4-202ENST00000393952 STRN4Q9NRL3 753 aa32.03■■■□□ 2.72
LRFN4-202ENST00000393952 LRP6O75581 1613 aa32.03■■■□□ 2.72
LRFN4-202ENST00000393952 TMPOP42166 694 aaKnown RBP32.02■■■□□ 2.72
LRFN4-202ENST00000393952 EVA1CP58658 441 aa32.02■■■□□ 2.72
LRFN4-202ENST00000393952 LARP1Q6PKG0 1096 aaKnown RBP31.99■■■□□ 2.71
LRFN4-202ENST00000393952 TOM1L2Q6ZVM7 507 aa31.98■■■□□ 2.71
LRFN4-202ENST00000393952 NGEFQ8N5V2 710 aa31.98■■■□□ 2.71
LRFN4-202ENST00000393952 NFE2L2Q16236 605 aa31.98■■■□□ 2.71
LRFN4-202ENST00000393952 NRAPQ86VF7 1730 aa31.98■■■□□ 2.71
LRFN4-202ENST00000393952 NWD2Q9ULI1 1742 aa31.96■■■□□ 2.71
LRFN4-202ENST00000393952 DLG5Q8TDM6 1919 aa31.96■■■□□ 2.71
LRFN4-202ENST00000393952 SLIT2O94813 1529 aa31.95■■■□□ 2.71
LRFN4-202ENST00000393952 ZNF521Q96K83 1311 aa31.95■■■□□ 2.7
LRFN4-202ENST00000393952 RIPK4P57078 832 aa31.94■■■□□ 2.7
LRFN4-202ENST00000393952 CENPBP07199 599 aaPredicted RBP31.94■■■□□ 2.7
LRFN4-202ENST00000393952 NCBP3Q53F19 620 aaKnown RBP31.94■■■□□ 2.7
LRFN4-202ENST00000393952 C8orf37Q96NL8 207 aa31.94■■■□□ 2.7
LRFN4-202ENST00000393952 CRB1P82279 1406 aa31.93■■■□□ 2.7
LRFN4-202ENST00000393952 CARD10Q9BWT7 1032 aa31.93■■■□□ 2.7
LRFN4-202ENST00000393952 MTHFSDQ2M296 383 aaKnown RBP31.92■■■□□ 2.7
LRFN4-202ENST00000393952 PHF23Q9BUL5 403 aaPredicted RBP31.92■■■□□ 2.7
LRFN4-202ENST00000393952 CCDC27Q2M243 656 aa31.91■■■□□ 2.7
LRFN4-202ENST00000393952 WWC1Q8IX03 1113 aa31.91■■■□□ 2.7
LRFN4-202ENST00000393952 FBXO41Q8TF61 875 aa31.91■■■□□ 2.7
LRFN4-202ENST00000393952 TRIM35Q9UPQ4 493 aa31.91■■■□□ 2.7
LRFN4-202ENST00000393952 MEGF6O75095 1541 aa31.91■■■□□ 2.7
LRFN4-202ENST00000393952 NGLY1Q96IV0 654 aa31.9■■■□□ 2.7
LRFN4-202ENST00000393952 RAPGEF4Q8WZA2 1011 aa31.9■■■□□ 2.7
LRFN4-202ENST00000393952 MEX3CQ5U5Q3 659 aaKnown RBP31.88■■■□□ 2.69
LRFN4-202ENST00000393952 GAS2L2Q8NHY3 880 aa31.88■■■□□ 2.69
LRFN4-202ENST00000393952 TATP17735 454 aaPredicted RBP31.86■■■□□ 2.69
LRFN4-202ENST00000393952 PDE3BQ13370 1112 aa31.85■■■□□ 2.69
LRFN4-202ENST00000393952 PLEKHO1Q53GL0 409 aaPredicted RBP31.85■■■□□ 2.69
LRFN4-202ENST00000393952 CDCA7LQ96GN5 454 aa31.85■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms