RNA–Protein interactions for RNA: ENST00000392590.3

CDCA4-202, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 1,536 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-202ENST00000392590 WASHC2AQ641Q2 1341 aa28.53■■■□□ 2.16
CDCA4-202ENST00000392590 LMO7Q8WWI1 1683 aa28.52■■■□□ 2.16
CDCA4-202ENST00000392590 GLI3P10071 1580 aa28.51■■■□□ 2.16
CDCA4-202ENST00000392590 ONECUT3O60422 494 aaPredicted RBP28.51■■■□□ 2.15
CDCA4-202ENST00000392590 SPATA31A1Q5TZJ5 1347 aa28.5■■■□□ 2.15
CDCA4-202ENST00000392590 FBLN1P23142 703 aa28.5■■■□□ 2.15
CDCA4-202ENST00000392590 COL5A2P05997 1499 aaPredicted RBP28.5■■■□□ 2.15
CDCA4-202ENST00000392590 FAM98CQ17RN3 349 aaKnown RBP28.49■■■□□ 2.15
CDCA4-202ENST00000392590 USP35Q9P2H5 1018 aa28.49■■■□□ 2.15
CDCA4-202ENST00000392590 SEPT12Q8IYM1 358 aa28.48■■■□□ 2.15
CDCA4-202ENST00000392590 KNSTRNQ9Y448 316 aa28.48■■■□□ 2.15
CDCA4-202ENST00000392590 CSB-PGBD3P0DP91 1061 aa28.47■■■□□ 2.15
CDCA4-202ENST00000392590 MAP3K19Q56UN5 1328 aa28.46■■■□□ 2.15
CDCA4-202ENST00000392590 A0A0G2JS52 829 aa28.46■■■□□ 2.15
CDCA4-202ENST00000392590 MYT1Q01538 1121 aa28.46■■■□□ 2.15
CDCA4-202ENST00000392590 TOM1L2Q6ZVM7 507 aa28.46■■■□□ 2.15
CDCA4-202ENST00000392590 AMPHP49418 695 aa28.45■■■□□ 2.15
CDCA4-202ENST00000392590 IP6K1Q92551 441 aa28.45■■■□□ 2.15
CDCA4-202ENST00000392590 COL18A1P39060 1754 aa28.45■■■□□ 2.14
CDCA4-202ENST00000392590 WDR17Q8IZU2 1322 aa28.45■■■□□ 2.14
CDCA4-202ENST00000392590 RRS1Q15050 365 aaKnown RBP28.44■■■□□ 2.14
CDCA4-202ENST00000392590 TCP11L2Q8N4U5 519 aa28.43■■■□□ 2.14
CDCA4-202ENST00000392590 CRB1P82279 1406 aa28.43■■■□□ 2.14
CDCA4-202ENST00000392590 ABCC6O95255 1503 aa28.42■■■□□ 2.14
CDCA4-202ENST00000392590 THRAP3Q9Y2W1 955 aaKnown RBP28.42■■■□□ 2.14
CDCA4-202ENST00000392590 KIF20BQ96Q89 1820 aa28.42■■■□□ 2.14
CDCA4-202ENST00000392590 BARGINQ6ZT62 677 aa28.41■■■□□ 2.14
CDCA4-202ENST00000392590 HOXC9P31274 260 aa28.39■■■□□ 2.14
CDCA4-202ENST00000392590 ANKRD24Q8TF21 1146 aa28.39■■■□□ 2.14
CDCA4-202ENST00000392590 ERBB3P21860 1342 aa28.38■■■□□ 2.13
CDCA4-202ENST00000392590 NSD2O96028 1365 aa28.38■■■□□ 2.13
CDCA4-202ENST00000392590 BLMP54132 1417 aaPredicted RBP28.38■■■□□ 2.13
CDCA4-202ENST00000392590 PER1O15534 1290 aaPredicted RBP28.38■■■□□ 2.13
CDCA4-202ENST00000392590 CARD10Q9BWT7 1032 aa28.38■■■□□ 2.13
CDCA4-202ENST00000392590 TNNT2P45379 298 aaPredicted RBP28.36■■■□□ 2.13
CDCA4-202ENST00000392590 AMER1Q5JTC6 1135 aaPredicted RBP28.36■■■□□ 2.13
CDCA4-202ENST00000392590 LTV1Q96GA3 475 aaPredicted RBP28.36■■■□□ 2.13
CDCA4-202ENST00000392590 LTN1O94822 1766 aa28.36■■■□□ 2.13
CDCA4-202ENST00000392590 KRT27Q7Z3Y8 459 aa28.35■■■□□ 2.13
CDCA4-202ENST00000392590 MORC1Q86VD1 984 aa28.35■■■□□ 2.13
CDCA4-202ENST00000392590 NLRP2Q9NX02 1062 aa28.35■■■□□ 2.13
CDCA4-202ENST00000392590 RTL1A6NKG5 1358 aa28.34■■■□□ 2.13
CDCA4-202ENST00000392590 EMILIN1Q9Y6C2 1016 aa28.33■■■□□ 2.13
CDCA4-202ENST00000392590 PPM1GO15355 546 aaPredicted RBP28.33■■■□□ 2.13
CDCA4-202ENST00000392590 RGPD5Q99666 1765 aa28.32■■■□□ 2.12
CDCA4-202ENST00000392590 KIF24Q5T7B8 1368 aa28.31■■■□□ 2.12
CDCA4-202ENST00000392590 HSP90AB2PQ58FF8 381 aa28.31■■■□□ 2.12
CDCA4-202ENST00000392590 POLKQ9UBT6 870 aa28.31■■■□□ 2.12
CDCA4-202ENST00000392590 UPF1Q92900 1129 aaKnown RBP eCLIP28.3■■■□□ 2.129e-8■■■□□ 14.7
CDCA4-202ENST00000392590 FLT4P35916 1363 aa28.3■■■□□ 2.12
CDCA4-202ENST00000392590 PDE3BQ13370 1112 aa28.28■■■□□ 2.12
CDCA4-202ENST00000392590 CC2D1BQ5T0F9 858 aaKnown RBP28.28■■■□□ 2.12
CDCA4-202ENST00000392590 CDCA7Q9BWT1 371 aaPredicted RBP28.28■■■□□ 2.12
CDCA4-202ENST00000392590 INSRP06213 1382 aa28.27■■■□□ 2.12
CDCA4-202ENST00000392590 THSD7AQ9UPZ6 1657 aa28.27■■■□□ 2.12
CDCA4-202ENST00000392590 ANKRD26Q9UPS8 1709 aa28.23■■■□□ 2.11
CDCA4-202ENST00000392590 CNGB1Q14028 1251 aaPredicted RBP28.23■■■□□ 2.11
CDCA4-202ENST00000392590 DDB1Q16531 1140 aa28.23■■■□□ 2.11
CDCA4-202ENST00000392590 SMG6Q86US8 1419 aaKnown RBP28.23■■■□□ 2.11
CDCA4-202ENST00000392590 FAM182BQ5T319 152 aa28.23■■■□□ 2.11
CDCA4-202ENST00000392590 BRWD3Q6RI45 1802 aa28.22■■■□□ 2.11
CDCA4-202ENST00000392590 NPC1L1Q9UHC9 1359 aa28.22■■■□□ 2.11
CDCA4-202ENST00000392590 IL2RBP14784 551 aa28.21■■■□□ 2.11
CDCA4-202ENST00000392590 PEAK1Q9H792 1746 aa28.2■■■□□ 2.11
CDCA4-202ENST00000392590 NBPF6Q5VWK0 638 aa28.2■■■□□ 2.1
CDCA4-202ENST00000392590 NBPF4Q96M43 638 aa28.2■■■□□ 2.1
CDCA4-202ENST00000392590 EXOC5O00471 708 aa28.19■■■□□ 2.1
CDCA4-202ENST00000392590 DISP2A7MBM2 1401 aa28.19■■■□□ 2.1
CDCA4-202ENST00000392590 FAM196AQ6ZSG2 479 aa28.17■■■□□ 2.1
CDCA4-202ENST00000392590 CCDC125Q86Z20 511 aa28.17■■■□□ 2.1
CDCA4-202ENST00000392590 USHBP1Q8N6Y0 703 aa28.15■■■□□ 2.1
CDCA4-202ENST00000392590 MAP2P11137 1827 aaKnown RBP28.14■■■□□ 2.1
CDCA4-202ENST00000392590 PARP4Q9UKK3 1724 aaKnown RBP28.14■■■□□ 2.09
CDCA4-202ENST00000392590 EIF4A2Q14240 407 aaKnown RBP28.13■■■□□ 2.09
CDCA4-202ENST00000392590 FAM208AQ9UK61 1670 aaKnown RBP28.12■■■□□ 2.09
CDCA4-202ENST00000392590 MTHFSP49914 203 aa28.12■■■□□ 2.09
CDCA4-202ENST00000392590 DDX10Q13206 875 aaKnown RBP28.12■■■□□ 2.09
CDCA4-202ENST00000392590 MARCH10Q8NA82 808 aaPredicted RBP28.11■■■□□ 2.09
CDCA4-202ENST00000392590 SF3B2Q13435 895 aaKnown RBP28.1■■■□□ 2.09
CDCA4-202ENST00000392590 EYA1Q99502 592 aa28.1■■■□□ 2.09
CDCA4-202ENST00000392590 RAPGEF4Q8WZA2 1011 aa28.09■■■□□ 2.09
CDCA4-202ENST00000392590 LRRC37A3O60309 1634 aa28.08■■■□□ 2.09
CDCA4-202ENST00000392590 TNS2Q63HR2 1409 aa28.07■■■□□ 2.08
CDCA4-202ENST00000392590 WNK3Q9BYP7 1800 aa28.06■■■□□ 2.08
CDCA4-202ENST00000392590 OVOS2A0A0G2JMS6 1433 aa28.06■■■□□ 2.08
CDCA4-202ENST00000392590 TRIM37O94972 964 aa28.06■■■□□ 2.08
CDCA4-202ENST00000392590 TATP17735 454 aaPredicted RBP28.06■■■□□ 2.08
CDCA4-202ENST00000392590 EP400Q96L91 3159 aa28.05■■■□□ 2.08
CDCA4-202ENST00000392590 ZCRB1Q8TBF4 217 aaKnown RBP28.04■■■□□ 2.08
CDCA4-202ENST00000392590 RGPD2P0DJD1 1756 aa28.03■■■□□ 2.08
CDCA4-202ENST00000392590 DDX54Q8TDD1 881 aaKnown RBP28.03■■■□□ 2.08
CDCA4-202ENST00000392590 MEGF6O75095 1541 aa28.03■■■□□ 2.08
CDCA4-202ENST00000392590 IL13P35225 146 aa28.01■■■□□ 2.07
CDCA4-202ENST00000392590 NCAPD2Q15021 1401 aa28■■■□□ 2.07
CDCA4-202ENST00000392590 IGSF1Q8N6C5 1336 aa28■■■□□ 2.07
CDCA4-202ENST00000392590 DEFB132Q7Z7B7 95 aa27.99■■■□□ 2.07
CDCA4-202ENST00000392590 ZNF316A6NFI3 1004 aaPredicted RBP27.98■■■□□ 2.07
CDCA4-202ENST00000392590 PPP2R1AP30153 589 aa27.98■■■□□ 2.07
CDCA4-202ENST00000392590 BCL9O00512 1426 aa27.98■■■□□ 2.07
CDCA4-202ENST00000392590 BAG6P46379 1132 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms