RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 TRPC5Q9UL62 973 aaPredicted RBP9.25□□□□□ -0.93
UBBP1-201ENST00000392399 ZBTB12Q9Y330 459 aaPredicted RBP9.25□□□□□ -0.93
UBBP1-201ENST00000392399 SLIT2O94813 1529 aa9.25□□□□□ -0.93
UBBP1-201ENST00000392399 USP54Q70EL1 1684 aa9.24□□□□□ -0.93
UBBP1-201ENST00000392399 CRYBG1Q9Y4K1 1723 aa9.24□□□□□ -0.93
UBBP1-201ENST00000392399 NPC1L1Q9UHC9 1359 aa9.24□□□□□ -0.93
UBBP1-201ENST00000392399 PHRF1Q9P1Y6 1649 aaKnown RBP9.23□□□□□ -0.93
UBBP1-201ENST00000392399 BCL9LQ86UU0 1499 aa9.23□□□□□ -0.93
UBBP1-201ENST00000392399 MARF1Q9Y4F3 1742 aaKnown RBP9.23□□□□□ -0.93
UBBP1-201ENST00000392399 SOX12O15370 315 aa9.23□□□□□ -0.93
UBBP1-201ENST00000392399 EVA1CP58658 441 aa9.23□□□□□ -0.93
UBBP1-201ENST00000392399 RBM6P78332 1123 aaKnown RBP9.23□□□□□ -0.93
UBBP1-201ENST00000392399 CHRNA2Q15822 529 aa9.23□□□□□ -0.93
UBBP1-201ENST00000392399 VPS72Q15906 364 aa9.23□□□□□ -0.93
UBBP1-201ENST00000392399 AMER1Q5JTC6 1135 aaPredicted RBP9.23□□□□□ -0.93
UBBP1-201ENST00000392399 KIF24Q5T7B8 1368 aa9.23□□□□□ -0.93
UBBP1-201ENST00000392399 ABCA3Q99758 1704 aa9.22□□□□□ -0.93
UBBP1-201ENST00000392399 COL14A1Q05707 1796 aaKnown RBP9.22□□□□□ -0.93
UBBP1-201ENST00000392399 ZNF316A6NFI3 1004 aaPredicted RBP9.22□□□□□ -0.93
UBBP1-201ENST00000392399 RXRBP28702 533 aa9.22□□□□□ -0.93
UBBP1-201ENST00000392399 POTEAQ6S8J7 498 aa9.22□□□□□ -0.93
UBBP1-201ENST00000392399 MORC1Q86VD1 984 aa9.22□□□□□ -0.93
UBBP1-201ENST00000392399 IP6K1Q92551 441 aa9.22□□□□□ -0.93
UBBP1-201ENST00000392399 GJD4Q96KN9 370 aaPredicted RBP9.22□□□□□ -0.93
UBBP1-201ENST00000392399 NFAT5O94916 1531 aa9.21□□□□□ -0.93
UBBP1-201ENST00000392399 ZBTB7CA1YPR0 619 aa9.21□□□□□ -0.94
UBBP1-201ENST00000392399 AMPHP49418 695 aa9.21□□□□□ -0.94
UBBP1-201ENST00000392399 POTEHQ6S545 545 aa9.21□□□□□ -0.94
UBBP1-201ENST00000392399 AXIN2Q9Y2T1 843 aa9.21□□□□□ -0.94
UBBP1-201ENST00000392399 NWD2Q9ULI1 1742 aa9.21□□□□□ -0.94
UBBP1-201ENST00000392399 ATRNO75882 1429 aa9.21□□□□□ -0.94
UBBP1-201ENST00000392399 ABCC6O95255 1503 aa9.21□□□□□ -0.94
UBBP1-201ENST00000392399 DDX10Q13206 875 aaKnown RBP9.2□□□□□ -0.94
UBBP1-201ENST00000392399 MAP3K19Q56UN5 1328 aa9.2□□□□□ -0.94
UBBP1-201ENST00000392399 BLMP54132 1417 aaPredicted RBP9.2□□□□□ -0.94
UBBP1-201ENST00000392399 ONECUT3O60422 494 aaPredicted RBP9.19□□□□□ -0.94
UBBP1-201ENST00000392399 HOXC9P31274 260 aa9.19□□□□□ -0.94
UBBP1-201ENST00000392399 RRS1Q15050 365 aaKnown RBP9.19□□□□□ -0.94
UBBP1-201ENST00000392399 STRN4Q9NRL3 753 aa9.19□□□□□ -0.94
UBBP1-201ENST00000392399 POLKQ9UBT6 870 aa9.19□□□□□ -0.94
UBBP1-201ENST00000392399 THRAP3Q9Y2W1 955 aaKnown RBP9.19□□□□□ -0.94
UBBP1-201ENST00000392399 CCDC9Q9Y3X0 531 aaKnown RBP9.19□□□□□ -0.94
UBBP1-201ENST00000392399 SPATA31A5Q5VU36 1347 aa9.19□□□□□ -0.94
UBBP1-201ENST00000392399 SPATA31A7Q8IWB4 1347 aa9.19□□□□□ -0.94
UBBP1-201ENST00000392399 WDR17Q8IZU2 1322 aa9.19□□□□□ -0.94
UBBP1-201ENST00000392399 RTL1A6NKG5 1358 aa9.19□□□□□ -0.94
UBBP1-201ENST00000392399 CAMTA1Q9Y6Y1 1673 aa9.19□□□□□ -0.94
UBBP1-201ENST00000392399 KIF20BQ96Q89 1820 aa9.19□□□□□ -0.94
UBBP1-201ENST00000392399 FBLN1P23142 703 aa9.18□□□□□ -0.94
UBBP1-201ENST00000392399 FLT4P35916 1363 aa9.18□□□□□ -0.94
UBBP1-201ENST00000392399 CC2D1BQ5T0F9 858 aaKnown RBP9.18□□□□□ -0.94
UBBP1-201ENST00000392399 SPATA31A1Q5TZJ5 1347 aa9.18□□□□□ -0.94
UBBP1-201ENST00000392399 LARP1Q6PKG0 1096 aaKnown RBP9.18□□□□□ -0.94
UBBP1-201ENST00000392399 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.18□□□□□ -0.94
UBBP1-201ENST00000392399 PLCH1Q4KWH8 1693 aa9.17□□□□□ -0.94
UBBP1-201ENST00000392399 LMO7Q8WWI1 1683 aa9.17□□□□□ -0.94
UBBP1-201ENST00000392399 COL5A2P05997 1499 aaPredicted RBP9.17□□□□□ -0.94
UBBP1-201ENST00000392399 CDK12Q9NYV4 1490 aaPredicted RBP9.17□□□□□ -0.94
UBBP1-201ENST00000392399 INSRP06213 1382 aa9.17□□□□□ -0.94
UBBP1-201ENST00000392399 ERBB3P21860 1342 aa9.17□□□□□ -0.94
UBBP1-201ENST00000392399 CSB-PGBD3P0DP91 1061 aa9.17□□□□□ -0.94
UBBP1-201ENST00000392399 TNNT2P45379 298 aaPredicted RBP9.17□□□□□ -0.94
UBBP1-201ENST00000392399 BARGINQ6ZT62 677 aa9.17□□□□□ -0.94
UBBP1-201ENST00000392399 TOM1L2Q6ZVM7 507 aa9.17□□□□□ -0.94
UBBP1-201ENST00000392399 TCP11L2Q8N4U5 519 aa9.17□□□□□ -0.94
UBBP1-201ENST00000392399 ANKRD24Q8TF21 1146 aa9.17□□□□□ -0.94
UBBP1-201ENST00000392399 CARD10Q9BWT7 1032 aa9.17□□□□□ -0.94
UBBP1-201ENST00000392399 COL18A1P39060 1754 aa9.17□□□□□ -0.94
UBBP1-201ENST00000392399 CRB1P82279 1406 aa9.16□□□□□ -0.94
UBBP1-201ENST00000392399 PPM1GO15355 546 aaPredicted RBP9.16□□□□□ -0.94
UBBP1-201ENST00000392399 CDCA7Q9BWT1 371 aaPredicted RBP9.16□□□□□ -0.94
UBBP1-201ENST00000392399 EMILIN1Q9Y6C2 1016 aa9.16□□□□□ -0.94
UBBP1-201ENST00000392399 NRAPQ86VF7 1730 aa9.15□□□□□ -0.94
UBBP1-201ENST00000392399 ANKRD26Q9UPS8 1709 aa9.15□□□□□ -0.94
UBBP1-201ENST00000392399 HSP90AB2PQ58FF8 381 aa9.15□□□□□ -0.94
UBBP1-201ENST00000392399 NLRP2Q9NX02 1062 aa9.15□□□□□ -0.94
UBBP1-201ENST00000392399 SMG6Q86US8 1419 aaKnown RBP9.14□□□□□ -0.95
UBBP1-201ENST00000392399 MTHFSP49914 203 aa9.14□□□□□ -0.95
UBBP1-201ENST00000392399 RALBP1Q15311 655 aa9.14□□□□□ -0.95
UBBP1-201ENST00000392399 FAM98CQ17RN3 349 aaKnown RBP9.14□□□□□ -0.95
UBBP1-201ENST00000392399 USP35Q9P2H5 1018 aa9.14□□□□□ -0.95
UBBP1-201ENST00000392399 LTN1O94822 1766 aa9.14□□□□□ -0.95
UBBP1-201ENST00000392399 MAP2P11137 1827 aaKnown RBP9.13□□□□□ -0.95
UBBP1-201ENST00000392399 ILDR2Q71H61 639 aa9.13□□□□□ -0.95
UBBP1-201ENST00000392399 SEPT12Q8IYM1 358 aa9.13□□□□□ -0.95
UBBP1-201ENST00000392399 LTV1Q96GA3 475 aaPredicted RBP9.13□□□□□ -0.95
UBBP1-201ENST00000392399 GLI3P10071 1580 aa9.12□□□□□ -0.95
UBBP1-201ENST00000392399 PPP2R1AP30153 589 aa9.12□□□□□ -0.95
UBBP1-201ENST00000392399 CNGB1Q14028 1251 aaPredicted RBP9.12□□□□□ -0.95
UBBP1-201ENST00000392399 NBPF6Q5VWK0 638 aa9.12□□□□□ -0.95
UBBP1-201ENST00000392399 NBPF4Q96M43 638 aa9.12□□□□□ -0.95
UBBP1-201ENST00000392399 CFAP53Q96M91 514 aa9.12□□□□□ -0.95
UBBP1-201ENST00000392399 PARD3Q8TEW0 1356 aa9.12□□□□□ -0.95
UBBP1-201ENST00000392399 A0A0G2JS52 829 aa9.11□□□□□ -0.95
UBBP1-201ENST00000392399 EXOC5O00471 708 aa9.11□□□□□ -0.95
UBBP1-201ENST00000392399 IL2RBP14784 551 aa9.11□□□□□ -0.95
UBBP1-201ENST00000392399 MYT1Q01538 1121 aa9.11□□□□□ -0.95
UBBP1-201ENST00000392399 EIF4A2Q14240 407 aaKnown RBP9.11□□□□□ -0.95
UBBP1-201ENST00000392399 AKT1S1Q96B36 256 aa9.11□□□□□ -0.95
UBBP1-201ENST00000392399 RGPD5Q99666 1765 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms