RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 WDR63Q8IWG1 891 aa17.67■□□□□ 0.42
PSME4-201ENST00000389993 TRAPPC8Q9Y2L5 1435 aa17.67■□□□□ 0.42
PSME4-201ENST00000389993 RNF214Q8ND24 703 aa17.66■□□□□ 0.42
PSME4-201ENST00000389993 GNAI3P08754 354 aa17.66■□□□□ 0.42
PSME4-201ENST00000389993 PTMSP20962 102 aa17.66■□□□□ 0.42
PSME4-201ENST00000389993 MPNDQ8N594 471 aa17.66■□□□□ 0.42
PSME4-201ENST00000389993 RPRD2Q5VT52 1461 aaKnown RBP17.66■□□□□ 0.42
PSME4-201ENST00000389993 FKBP4Q02790 459 aaKnown RBP eCLIP17.66■□□□□ 0.42
PSME4-201ENST00000389993 CSPP1Q1MSJ5 1256 aa17.66■□□□□ 0.42
PSME4-201ENST00000389993 PIP4K2AP48426 406 aaPredicted RBP17.65■□□□□ 0.42
PSME4-201ENST00000389993 UGGT2Q9NYU1 1516 aa17.65■□□□□ 0.42
PSME4-201ENST00000389993 TSHZ3Q63HK5 1081 aa17.65■□□□□ 0.42
PSME4-201ENST00000389993 CWC27Q6UX04 472 aaKnown RBP17.65■□□□□ 0.42
PSME4-201ENST00000389993 TPD52L1Q16890 204 aaPredicted RBP17.65■□□□□ 0.42
PSME4-201ENST00000389993 FCHSD2O94868 740 aa17.64■□□□□ 0.42
PSME4-201ENST00000389993 SRCIN1Q9C0H9 1055 aa17.64■□□□□ 0.42
PSME4-201ENST00000389993 TTC39AQ5SRH9 613 aa17.64■□□□□ 0.41
PSME4-201ENST00000389993 AACSQ86V21 672 aa17.64■□□□□ 0.41
PSME4-201ENST00000389993 LARP6Q9BRS8 491 aaKnown RBP17.64■□□□□ 0.41
PSME4-201ENST00000389993 CHMP5Q9NZZ3 219 aa17.64■□□□□ 0.41
PSME4-201ENST00000389993 TPM4P67936 248 aa17.64■□□□□ 0.41
PSME4-201ENST00000389993 CHD1LQ86WJ1 897 aa17.64■□□□□ 0.41
PSME4-201ENST00000389993 SPG7Q9UQ90 795 aa17.64■□□□□ 0.41
PSME4-201ENST00000389993 TRIM29Q14134 588 aa17.64■□□□□ 0.41
PSME4-201ENST00000389993 DENND4BO75064 1496 aaPredicted RBP17.64■□□□□ 0.41
PSME4-201ENST00000389993 LRRCC1Q9C099 1032 aa17.63■□□□□ 0.41
PSME4-201ENST00000389993 PDE3AQ14432 1141 aa17.63■□□□□ 0.41
PSME4-201ENST00000389993 RNF20Q5VTR2 975 aa17.63■□□□□ 0.41
PSME4-201ENST00000389993 ZNF592Q92610 1267 aa17.63■□□□□ 0.41
PSME4-201ENST00000389993 KDM5BQ9UGL1 1544 aa17.62■□□□□ 0.41
PSME4-201ENST00000389993 HSP90AB4PQ58FF6 505 aa17.62■□□□□ 0.41
PSME4-201ENST00000389993 RARSP54136 660 aaKnown RBP17.62■□□□□ 0.41
PSME4-201ENST00000389993 CABLES1Q8TDN4 633 aa17.62■□□□□ 0.41
PSME4-201ENST00000389993 ACEP12821 1306 aa17.61■□□□□ 0.41
PSME4-201ENST00000389993 RALYLQ86SE5 291 aaKnown RBP17.61■□□□□ 0.41
PSME4-201ENST00000389993 POGZQ7Z3K3 1410 aa17.61■□□□□ 0.41
PSME4-201ENST00000389993 PHF8Q9UPP1 1060 aa17.61■□□□□ 0.41
PSME4-201ENST00000389993 TNNQ9UQP3 1299 aa17.61■□□□□ 0.41
PSME4-201ENST00000389993 PIBF1Q8WXW3 757 aa17.61■□□□□ 0.41
PSME4-201ENST00000389993 BECN2A8MW95 431 aa17.61■□□□□ 0.41
PSME4-201ENST00000389993 ERICH2A1L162 156 aa17.6■□□□□ 0.41
PSME4-201ENST00000389993 MYD88Q99836 296 aa17.6■□□□□ 0.41
PSME4-201ENST00000389993 GOLGA6L19H0YKK7 550 aa17.6■□□□□ 0.41
PSME4-201ENST00000389993 AMOTL1Q8IY63 956 aa17.6■□□□□ 0.41
PSME4-201ENST00000389993 HSP90AB2PQ58FF8 381 aa17.6■□□□□ 0.41
PSME4-201ENST00000389993 KIF3AQ9Y496 699 aa17.6■□□□□ 0.41
PSME4-201ENST00000389993 C14orf93Q9H972 538 aaKnown RBP17.59■□□□□ 0.41
PSME4-201ENST00000389993 BACH2Q9BYV9 841 aa17.59■□□□□ 0.41
PSME4-201ENST00000389993 PHF14O94880 888 aa17.59■□□□□ 0.41
PSME4-201ENST00000389993 DHX29Q7Z478 1369 aaKnown RBP17.59■□□□□ 0.41
PSME4-201ENST00000389993 AEBP1Q8IUX7 1158 aa17.58■□□□□ 0.41
PSME4-201ENST00000389993 NINLQ9Y2I6 1382 aa17.58■□□□□ 0.41
PSME4-201ENST00000389993 EIF4G3O43432 1585 aaKnown RBP17.58■□□□□ 0.41
PSME4-201ENST00000389993 MAP3K1Q13233 1512 aa17.58■□□□□ 0.41
PSME4-201ENST00000389993 PRPF40AO75400 957 aaKnown RBP17.58■□□□□ 0.41
PSME4-201ENST00000389993 CCAR2Q8N163 923 aaKnown RBP17.58■□□□□ 0.41
PSME4-201ENST00000389993 KIAA0556O60303 1618 aa17.58■□□□□ 0.4
PSME4-201ENST00000389993 CCT4P50991 539 aaKnown RBP17.58■□□□□ 0.4
PSME4-201ENST00000389993 CAVIN1Q6NZI2 390 aaKnown RBP17.58■□□□□ 0.4
PSME4-201ENST00000389993 ATP2B2Q01814 1243 aa17.57■□□□□ 0.4
PSME4-201ENST00000389993 LRRFIP1Q32MZ4 808 aaKnown RBP17.57■□□□□ 0.4
PSME4-201ENST00000389993 SCAF11Q99590 1463 aaKnown RBP17.57■□□□□ 0.4
PSME4-201ENST00000389993 HSPA2P54652 639 aa17.57■□□□□ 0.4
PSME4-201ENST00000389993 KRT28Q7Z3Y7 464 aa17.57■□□□□ 0.4
PSME4-201ENST00000389993 TAF7Q15545 349 aaPredicted RBP17.56■□□□□ 0.4
PSME4-201ENST00000389993 GCC1Q96CN9 775 aa17.56■□□□□ 0.4
PSME4-201ENST00000389993 ADAMTS12P58397 1594 aa17.56■□□□□ 0.4
PSME4-201ENST00000389993 FIBPO43427 364 aa17.56■□□□□ 0.4
PSME4-201ENST00000389993 PPFIA3O75145 1194 aa17.55■□□□□ 0.4
PSME4-201ENST00000389993 GPTP24298 496 aa17.55■□□□□ 0.4
PSME4-201ENST00000389993 ATP5J2-PTCD1G3V325 749 aa17.55■□□□□ 0.4
PSME4-201ENST00000389993 CCDC57Q2TAC2 916 aa17.55■□□□□ 0.4
PSME4-201ENST00000389993 CCDC8Q9H0W5 538 aaPredicted RBP17.55■□□□□ 0.4
PSME4-201ENST00000389993 IGHDP01880 384 aa17.54■□□□□ 0.4
PSME4-201ENST00000389993 CPLX2Q6PUV4 134 aaKnown RBP17.54■□□□□ 0.4
PSME4-201ENST00000389993 ATP6V1DQ9Y5K8 247 aa17.54■□□□□ 0.4
PSME4-201ENST00000389993 TRIM27P14373 513 aa17.54■□□□□ 0.4
PSME4-201ENST00000389993 LRRC59Q96AG4 307 aaKnown RBP17.54■□□□□ 0.4
PSME4-201ENST00000389993 PCMTD1Q96MG8 357 aaPredicted RBP17.54■□□□□ 0.4
PSME4-201ENST00000389993 IKQ13123 557 aaPredicted RBP17.54■□□□□ 0.4
PSME4-201ENST00000389993 LRRFIP2Q9Y608 721 aaKnown RBP17.54■□□□□ 0.4
PSME4-201ENST00000389993 KRT24Q2M2I5 525 aa17.54■□□□□ 0.4
PSME4-201ENST00000389993 SLC4A8Q2Y0W8 1093 aa17.54■□□□□ 0.4
PSME4-201ENST00000389993 PLCH2O75038 1416 aa17.53■□□□□ 0.4
PSME4-201ENST00000389993 MBIPQ9NS73 344 aa17.53■□□□□ 0.4
PSME4-201ENST00000389993 BOLA2Q9H3K6 86 aa17.53■□□□□ 0.4
PSME4-201ENST00000389993 ZBTB3Q9H5J0 574 aa17.53■□□□□ 0.4
PSME4-201ENST00000389993 CTDP1Q9Y5B0 961 aaPredicted RBP17.53■□□□□ 0.4
PSME4-201ENST00000389993 NOC3LQ8WTT2 800 aaKnown RBP17.53■□□□□ 0.4
PSME4-201ENST00000389993 ZNF219Q9P2Y4 722 aaPredicted RBP17.53■□□□□ 0.4
PSME4-201ENST00000389993 KAT6BQ8WYB5 2073 aa17.53■□□□□ 0.4
PSME4-201ENST00000389993 CCDC158Q5M9N0 1113 aa17.53■□□□□ 0.4
PSME4-201ENST00000389993 PBRM1Q86U86 1689 aa17.52■□□□□ 0.4
PSME4-201ENST00000389993 MPHOSPH8Q99549 860 aa17.52■□□□□ 0.4
PSME4-201ENST00000389993 SLC39A6Q13433 755 aa17.52■□□□□ 0.39
PSME4-201ENST00000389993 TBC1D2BQ9UPU7 963 aa17.52■□□□□ 0.39
PSME4-201ENST00000389993 WDR62O43379 1518 aa17.52■□□□□ 0.39
PSME4-201ENST00000389993 FMNL2Q96PY5 1086 aa17.51■□□□□ 0.39
PSME4-201ENST00000389993 ITSN2Q9NZM3 1697 aa17.51■□□□□ 0.39
PSME4-201ENST00000389993 TRAK2O60296 914 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 286.1 ms