RNA–Protein interactions for RNA: ENST00000387416.2

MT-TS1-201, Transcript of mitochondrially encoded tRNA serine 1 (UCN), humanhuman

BASIC

Gene MT-TS1, Length 69 nt, Biotype Mt tRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MT-TS1-201ENST00000387416 SF3B2Q13435 895 aaKnown RBP11.79□□□□□ -0.52
MT-TS1-201ENST00000387416 WDR17Q8IZU2 1322 aa11.79□□□□□ -0.52
MT-TS1-201ENST00000387416 NFAT5O94916 1531 aa11.78□□□□□ -0.52
MT-TS1-201ENST00000387416 SOX12O15370 315 aa11.78□□□□□ -0.52
MT-TS1-201ENST00000387416 HSPA5P11021 654 aaKnown RBP11.78□□□□□ -0.52
MT-TS1-201ENST00000387416 PDE3BQ13370 1112 aa11.78□□□□□ -0.52
MT-TS1-201ENST00000387416 TOM1L2Q6ZVM7 507 aa11.78□□□□□ -0.52
MT-TS1-201ENST00000387416 BRWD3Q6RI45 1802 aa11.78□□□□□ -0.52
MT-TS1-201ENST00000387416 BLMP54132 1417 aaPredicted RBP11.77□□□□□ -0.52
MT-TS1-201ENST00000387416 COL18A1P39060 1754 aa11.77□□□□□ -0.52
MT-TS1-201ENST00000387416 CSB-PGBD3P0DP91 1061 aa11.77□□□□□ -0.53
MT-TS1-201ENST00000387416 FAM196AQ6ZSG2 479 aa11.77□□□□□ -0.53
MT-TS1-201ENST00000387416 CARD10Q9BWT7 1032 aa11.77□□□□□ -0.53
MT-TS1-201ENST00000387416 USP35Q9P2H5 1018 aa11.77□□□□□ -0.53
MT-TS1-201ENST00000387416 ZRANB1Q9UGI0 708 aa11.77□□□□□ -0.53
MT-TS1-201ENST00000387416 AXIN2Q9Y2T1 843 aa11.77□□□□□ -0.53
MT-TS1-201ENST00000387416 OVOS2A0A0J9YW53 1432 aa11.77□□□□□ -0.53
MT-TS1-201ENST00000387416 OVOS2Q6IE36 1432 aa11.77□□□□□ -0.53
MT-TS1-201ENST00000387416 THSD7AQ9UPZ6 1657 aa11.76□□□□□ -0.53
MT-TS1-201ENST00000387416 FYB1O15117 783 aa11.76□□□□□ -0.53
MT-TS1-201ENST00000387416 IP6K1Q92551 441 aa11.75□□□□□ -0.53
MT-TS1-201ENST00000387416 CCDC7Q96M83 1385 aa11.75□□□□□ -0.53
MT-TS1-201ENST00000387416 EP400Q96L91 3159 aa11.75□□□□□ -0.53
MT-TS1-201ENST00000387416 CGNL1Q0VF96 1302 aa11.74□□□□□ -0.53
MT-TS1-201ENST00000387416 ERBB3P21860 1342 aa11.73□□□□□ -0.53
MT-TS1-201ENST00000387416 BAG6P46379 1132 aa11.73□□□□□ -0.53
MT-TS1-201ENST00000387416 AMPHP49418 695 aa11.73□□□□□ -0.53
MT-TS1-201ENST00000387416 DDB1Q16531 1140 aa11.73□□□□□ -0.53
MT-TS1-201ENST00000387416 KIF24Q5T7B8 1368 aa11.73□□□□□ -0.53
MT-TS1-201ENST00000387416 POLR3GLQ9BT43 218 aa11.72□□□□□ -0.53
MT-TS1-201ENST00000387416 CARD14Q9BXL6 1004 aa11.72□□□□□ -0.53
MT-TS1-201ENST00000387416 GGNBP2Q9H3C7 697 aa11.72□□□□□ -0.53
MT-TS1-201ENST00000387416 NLRP2Q9NX02 1062 aa11.72□□□□□ -0.53
MT-TS1-201ENST00000387416 RTL1A6NKG5 1358 aa11.71□□□□□ -0.53
MT-TS1-201ENST00000387416 MAP3K19Q56UN5 1328 aa11.71□□□□□ -0.53
MT-TS1-201ENST00000387416 EXOC5O00471 708 aa11.71□□□□□ -0.53
MT-TS1-201ENST00000387416 ANKRD24Q8TF21 1146 aa11.71□□□□□ -0.53
MT-TS1-201ENST00000387416 LTN1O94822 1766 aa11.71□□□□□ -0.54
MT-TS1-201ENST00000387416 RGPD5Q99666 1765 aa11.71□□□□□ -0.54
MT-TS1-201ENST00000387416 PARP4Q9UKK3 1724 aaKnown RBP11.71□□□□□ -0.54
MT-TS1-201ENST00000387416 NSD3Q9BZ95 1437 aa11.7□□□□□ -0.54
MT-TS1-201ENST00000387416 MYOM1P52179 1685 aa11.69□□□□□ -0.54
MT-TS1-201ENST00000387416 IL2RBP14784 551 aa11.69□□□□□ -0.54
MT-TS1-201ENST00000387416 HOXC9P31274 260 aa11.69□□□□□ -0.54
MT-TS1-201ENST00000387416 KIF20BQ96Q89 1820 aa11.68□□□□□ -0.54
MT-TS1-201ENST00000387416 PANK3Q9H999 370 aa11.68□□□□□ -0.54
MT-TS1-201ENST00000387416 OVOS2A0A0G2JMS6 1433 aa11.68□□□□□ -0.54
MT-TS1-201ENST00000387416 DISP2A7MBM2 1401 aa11.68□□□□□ -0.54
MT-TS1-201ENST00000387416 NSD2O96028 1365 aa11.67□□□□□ -0.54
MT-TS1-201ENST00000387416 RGPD1P0DJD0 1748 aa11.67□□□□□ -0.54
MT-TS1-201ENST00000387416 TRIM37O94972 964 aa11.67□□□□□ -0.54
MT-TS1-201ENST00000387416 FAM182BQ5T319 152 aa11.67□□□□□ -0.54
MT-TS1-201ENST00000387416 KNSTRNQ9Y448 316 aa11.67□□□□□ -0.54
MT-TS1-201ENST00000387416 FAM208AQ9UK61 1670 aaKnown RBP11.67□□□□□ -0.54
MT-TS1-201ENST00000387416 BCL9O00512 1426 aa11.67□□□□□ -0.54
MT-TS1-201ENST00000387416 SMG6Q86US8 1419 aaKnown RBP11.67□□□□□ -0.54
MT-TS1-201ENST00000387416 INSRP06213 1382 aa11.67□□□□□ -0.54
MT-TS1-201ENST00000387416 FLT4P35916 1363 aa11.67□□□□□ -0.54
MT-TS1-201ENST00000387416 PARD3Q8TEW0 1356 aa11.67□□□□□ -0.54
MT-TS1-201ENST00000387416 RRS1Q15050 365 aaKnown RBP11.66□□□□□ -0.54
MT-TS1-201ENST00000387416 DEFB132Q7Z7B7 95 aa11.66□□□□□ -0.54
MT-TS1-201ENST00000387416 APBA3O96018 575 aa11.65□□□□□ -0.54
MT-TS1-201ENST00000387416 MARCH10Q8NA82 808 aaPredicted RBP11.65□□□□□ -0.54
MT-TS1-201ENST00000387416 LTV1Q96GA3 475 aaPredicted RBP11.65□□□□□ -0.54
MT-TS1-201ENST00000387416 FBLN1P23142 703 aa11.64□□□□□ -0.55
MT-TS1-201ENST00000387416 BCL11BQ9C0K0 894 aaPredicted RBP11.64□□□□□ -0.55
MT-TS1-201ENST00000387416 WNK3Q9BYP7 1800 aa11.64□□□□□ -0.55
MT-TS1-201ENST00000387416 KIF7Q2M1P5 1343 aa11.63□□□□□ -0.55
MT-TS1-201ENST00000387416 WASHC2AQ641Q2 1341 aa11.63□□□□□ -0.55
MT-TS1-201ENST00000387416 TNS2Q63HR2 1409 aa11.63□□□□□ -0.55
MT-TS1-201ENST00000387416 EN1Q05925 392 aaPredicted RBP11.63□□□□□ -0.55
MT-TS1-201ENST00000387416 HSP90AB2PQ58FF8 381 aa11.63□□□□□ -0.55
MT-TS1-201ENST00000387416 CAMKK2Q96RR4 588 aa11.63□□□□□ -0.55
MT-TS1-201ENST00000387416 LRRC37A3O60309 1634 aa11.63□□□□□ -0.55
MT-TS1-201ENST00000387416 PLSCR1O15162 318 aa11.62□□□□□ -0.55
MT-TS1-201ENST00000387416 MORC1Q86VD1 984 aa11.62□□□□□ -0.55
MT-TS1-201ENST00000387416 RAPGEF4Q8WZA2 1011 aa11.62□□□□□ -0.55
MT-TS1-201ENST00000387416 POLKQ9UBT6 870 aa11.62□□□□□ -0.55
MT-TS1-201ENST00000387416 KAT6BQ8WYB5 2073 aa11.62□□□□□ -0.55
MT-TS1-201ENST00000387416 MAP2P11137 1827 aaKnown RBP11.61□□□□□ -0.55
MT-TS1-201ENST00000387416 PPM1GO15355 546 aaPredicted RBP11.61□□□□□ -0.55
MT-TS1-201ENST00000387416 NBPF6Q5VWK0 638 aa11.61□□□□□ -0.55
MT-TS1-201ENST00000387416 ZCRB1Q8TBF4 217 aaKnown RBP11.61□□□□□ -0.55
MT-TS1-201ENST00000387416 NBPF4Q96M43 638 aa11.61□□□□□ -0.55
MT-TS1-201ENST00000387416 EMILIN1Q9Y6C2 1016 aa11.61□□□□□ -0.55
MT-TS1-201ENST00000387416 PEAK1Q9H792 1746 aa11.6□□□□□ -0.55
MT-TS1-201ENST00000387416 TATP17735 454 aaPredicted RBP11.6□□□□□ -0.55
MT-TS1-201ENST00000387416 NBPF14Q5TI25 921 aa11.6□□□□□ -0.55
MT-TS1-201ENST00000387416 TNS1Q9HBL0 1735 aaKnown RBP11.6□□□□□ -0.55
MT-TS1-201ENST00000387416 ANKRD26Q9UPS8 1709 aa11.6□□□□□ -0.55
MT-TS1-201ENST00000387416 SBF2Q86WG5 1849 aa11.59□□□□□ -0.55
MT-TS1-201ENST00000387416 EZH2Q15910 746 aaKnown RBP11.59□□□□□ -0.55
MT-TS1-201ENST00000387416 PLEKHG2Q9H7P9 1386 aa11.58□□□□□ -0.56
MT-TS1-201ENST00000387416 NPC1L1Q9UHC9 1359 aa11.58□□□□□ -0.56
MT-TS1-201ENST00000387416 PER1O15534 1290 aaPredicted RBP11.58□□□□□ -0.56
MT-TS1-201ENST00000387416 HMGB2P26583 209 aaKnown RBP11.58□□□□□ -0.56
MT-TS1-201ENST00000387416 AMER1Q5JTC6 1135 aaPredicted RBP11.58□□□□□ -0.56
MT-TS1-201ENST00000387416 DDX54Q8TDD1 881 aaKnown RBP11.58□□□□□ -0.56
MT-TS1-201ENST00000387416 TNNT2P45379 298 aaPredicted RBP11.57□□□□□ -0.56
MT-TS1-201ENST00000387416 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms