RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 F6X3S4 739 aa20.58■□□□□ 0.89
SGCB-201ENST00000381431 MYL6BP14649 208 aa20.58■□□□□ 0.89
SGCB-201ENST00000381431 FMNL2Q96PY5 1086 aa20.58■□□□□ 0.89
SGCB-201ENST00000381431 THOC2Q8NI27 1593 aaKnown RBP20.58■□□□□ 0.89
SGCB-201ENST00000381431 ATP2B1P20020 1258 aa20.58■□□□□ 0.88
SGCB-201ENST00000381431 TRIM5Q9C035 493 aa20.58■□□□□ 0.88
SGCB-201ENST00000381431 CWC22Q9HCG8 908 aaKnown RBP20.58■□□□□ 0.88
SGCB-201ENST00000381431 CUL7Q14999 1698 aa20.57■□□□□ 0.88
SGCB-201ENST00000381431 TSR1Q2NL82 804 aaKnown RBP20.57■□□□□ 0.88
SGCB-201ENST00000381431 CWC27Q6UX04 472 aaKnown RBP20.57■□□□□ 0.88
SGCB-201ENST00000381431 THEMISQ8N1K5 641 aaPredicted RBP20.57■□□□□ 0.88
SGCB-201ENST00000381431 PDCP20941 246 aa20.57■□□□□ 0.88
SGCB-201ENST00000381431 PEG3Q9GZU2 1588 aa20.57■□□□□ 0.88
SGCB-201ENST00000381431 RAD21O60216 631 aa20.56■□□□□ 0.88
SGCB-201ENST00000381431 GPATCH8Q9UKJ3 1502 aaKnown RBP20.56■□□□□ 0.88
SGCB-201ENST00000381431 NUTM1Q86Y26 1132 aa20.56■□□□□ 0.88
SGCB-201ENST00000381431 TSPY26PQ9H489 355 aa20.56■□□□□ 0.88
SGCB-201ENST00000381431 CYP46A1Q9Y6A2 500 aa20.56■□□□□ 0.88
SGCB-201ENST00000381431 CCDC39Q9UFE4 941 aa20.56■□□□□ 0.88
SGCB-201ENST00000381431 CIZ1Q9ULV3 898 aaPredicted RBP20.55■□□□□ 0.88
SGCB-201ENST00000381431 FYB1O15117 783 aa20.54■□□□□ 0.88
SGCB-201ENST00000381431 TPM1P09493 284 aa20.54■□□□□ 0.88
SGCB-201ENST00000381431 ERICH2A1L162 156 aa20.54■□□□□ 0.88
SGCB-201ENST00000381431 SAFBQ15424 915 aaKnown RBP eCLIP20.54■□□□□ 0.88
SGCB-201ENST00000381431 GOLGA6L1Q8N7Z2 621 aa20.54■□□□□ 0.88
SGCB-201ENST00000381431 AACSQ86V21 672 aa20.53■□□□□ 0.88
SGCB-201ENST00000381431 ERC1Q8IUD2 1116 aa20.53■□□□□ 0.88
SGCB-201ENST00000381431 DHX16O60231 1041 aaKnown RBP20.53■□□□□ 0.88
SGCB-201ENST00000381431 NCBP3Q53F19 620 aaKnown RBP20.53■□□□□ 0.88
SGCB-201ENST00000381431 SPC24Q8NBT2 197 aa20.53■□□□□ 0.88
SGCB-201ENST00000381431 PCDHB15Q9Y5E8 787 aa20.53■□□□□ 0.88
SGCB-201ENST00000381431 CCDC173Q0VFZ6 552 aa20.52■□□□□ 0.88
SGCB-201ENST00000381431 STRN4Q9NRL3 753 aa20.52■□□□□ 0.88
SGCB-201ENST00000381431 TATP17735 454 aaPredicted RBP20.52■□□□□ 0.88
SGCB-201ENST00000381431 ALDH1L2Q3SY69 923 aa20.52■□□□□ 0.88
SGCB-201ENST00000381431 WDR33Q9C0J8 1336 aaKnown RBP20.52■□□□□ 0.88
SGCB-201ENST00000381431 BIVM-ERCC5R4GMW8 1640 aa20.52■□□□□ 0.87
SGCB-201ENST00000381431 RBM42Q9BTD8 480 aaKnown RBP20.52■□□□□ 0.87
SGCB-201ENST00000381431 TNNT3P45378 269 aaPredicted RBP20.51■□□□□ 0.87
SGCB-201ENST00000381431 ZC3H6P61129 1189 aaKnown RBP20.51■□□□□ 0.87
SGCB-201ENST00000381431 LAMC3Q9Y6N6 1575 aa20.51■□□□□ 0.87
SGCB-201ENST00000381431 FAM83GA6ND36 823 aa20.51■□□□□ 0.87
SGCB-201ENST00000381431 KINO60870 393 aaKnown RBP20.51■□□□□ 0.87
SGCB-201ENST00000381431 LARP1BQ659C4 914 aaKnown RBP20.51■□□□□ 0.87
SGCB-201ENST00000381431 DDX54Q8TDD1 881 aaKnown RBP20.51■□□□□ 0.87
SGCB-201ENST00000381431 NOS1P29475 1434 aa20.51■□□□□ 0.87
SGCB-201ENST00000381431 SCAF11Q99590 1463 aaKnown RBP20.51■□□□□ 0.87
SGCB-201ENST00000381431 ESPNB1AK53 854 aa20.5■□□□□ 0.87
SGCB-201ENST00000381431 JAKMIP1Q96N16 626 aaKnown RBP20.5■□□□□ 0.87
SGCB-201ENST00000381431 HIP1O00291 1037 aa20.5■□□□□ 0.87
SGCB-201ENST00000381431 C14orf93Q9H972 538 aaKnown RBP20.5■□□□□ 0.87
SGCB-201ENST00000381431 MTMR7Q9Y216 660 aa20.5■□□□□ 0.87
SGCB-201ENST00000381431 BTBD11A6QL63 1104 aa20.5■□□□□ 0.87
SGCB-201ENST00000381431 USHBP1Q8N6Y0 703 aa20.5■□□□□ 0.87
SGCB-201ENST00000381431 PCMTD1Q96MG8 357 aaPredicted RBP20.5■□□□□ 0.87
SGCB-201ENST00000381431 GNAT3A8MTJ3 354 aa20.49■□□□□ 0.87
SGCB-201ENST00000381431 RBM33Q96EV2 1170 aaKnown RBP20.49■□□□□ 0.87
SGCB-201ENST00000381431 RBM10P98175 930 aaKnown RBP20.48■□□□□ 0.87
SGCB-201ENST00000381431 CD109Q6YHK3 1445 aa20.48■□□□□ 0.87
SGCB-201ENST00000381431 ABCC11Q96J66 1382 aa20.48■□□□□ 0.87
SGCB-201ENST00000381431 BLOC1S2Q6QNY1 142 aa20.48■□□□□ 0.87
SGCB-201ENST00000381431 TESK2Q96S53 571 aa20.48■□□□□ 0.87
SGCB-201ENST00000381431 HOOK1Q9UJC3 728 aaKnown RBP20.48■□□□□ 0.87
SGCB-201ENST00000381431 ADGRL1O94910 1474 aa20.48■□□□□ 0.87
SGCB-201ENST00000381431 FERMT3Q86UX7 667 aa20.47■□□□□ 0.87
SGCB-201ENST00000381431 TNNQ9UQP3 1299 aa20.47■□□□□ 0.87
SGCB-201ENST00000381431 RRP12Q5JTH9 1297 aaKnown RBP20.47■□□□□ 0.87
SGCB-201ENST00000381431 NOL10Q9BSC4 688 aaKnown RBP20.47■□□□□ 0.87
SGCB-201ENST00000381431 MX1P20591 662 aa20.47■□□□□ 0.87
SGCB-201ENST00000381431 A0A0U1RQG5 324 aaPredicted RBP20.47■□□□□ 0.87
SGCB-201ENST00000381431 IPO7O95373 1038 aaKnown RBP20.46■□□□□ 0.87
SGCB-201ENST00000381431 SSFA2P28290 1259 aa20.46■□□□□ 0.87
SGCB-201ENST00000381431 CABP4P57796 275 aa20.46■□□□□ 0.87
SGCB-201ENST00000381431 CCDC85AQ96PX6 553 aaPredicted RBP20.46■□□□□ 0.87
SGCB-201ENST00000381431 KIF14Q15058 1648 aa20.46■□□□□ 0.87
SGCB-201ENST00000381431 KRT85P78386 507 aa20.45■□□□□ 0.87
SGCB-201ENST00000381431 STK11IPQ8N1F8 1099 aa20.45■□□□□ 0.87
SGCB-201ENST00000381431 WASLO00401 505 aaPredicted RBP20.45■□□□□ 0.86
SGCB-201ENST00000381431 ZNF771Q7L3S4 317 aaPredicted RBP20.45■□□□□ 0.86
SGCB-201ENST00000381431 AMOTL1Q8IY63 956 aa20.45■□□□□ 0.86
SGCB-201ENST00000381431 ANKRD20A12PQ8NF67 263 aa20.45■□□□□ 0.86
SGCB-201ENST00000381431 SYCE3A1L190 88 aa20.45■□□□□ 0.86
SGCB-201ENST00000381431 STK38Q15208 465 aa20.45■□□□□ 0.86
SGCB-201ENST00000381431 TBC1D2BQ9UPU7 963 aa20.45■□□□□ 0.86
SGCB-201ENST00000381431 PDRG1Q9NUG6 133 aa20.44■□□□□ 0.86
SGCB-201ENST00000381431 LETM1O95202 739 aaPredicted RBP20.44■□□□□ 0.86
SGCB-201ENST00000381431 FKBP4Q02790 459 aaKnown RBP eCLIP20.44■□□□□ 0.86
SGCB-201ENST00000381431 TAF7Q15545 349 aaPredicted RBP20.44■□□□□ 0.86
SGCB-201ENST00000381431 PDILTQ8N807 584 aa20.44■□□□□ 0.86
SGCB-201ENST00000381431 NAT10Q9H0A0 1025 aaKnown RBP20.44■□□□□ 0.86
SGCB-201ENST00000381431 TOM1L2Q6ZVM7 507 aa20.43■□□□□ 0.86
SGCB-201ENST00000381431 TNPO1Q92973 898 aaKnown RBP20.43■□□□□ 0.86
SGCB-201ENST00000381431 TSHZ3Q63HK5 1081 aa20.43■□□□□ 0.86
SGCB-201ENST00000381431 TBC1D9Q6ZT07 1266 aa20.43■□□□□ 0.86
SGCB-201ENST00000381431 ME1P48163 572 aa20.43■□□□□ 0.86
SGCB-201ENST00000381431 CNNM1Q9NRU3 951 aa20.43■□□□□ 0.86
SGCB-201ENST00000381431 CASTP20810 708 aaKnown RBP20.42■□□□□ 0.86
SGCB-201ENST00000381431 TBC1D32Q96NH3 1257 aa20.42■□□□□ 0.86
SGCB-201ENST00000381431 LARP6Q9BRS8 491 aaKnown RBP20.42■□□□□ 0.86
SGCB-201ENST00000381431 MBIPQ9NS73 344 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms