RNA–Protein interactions for RNA: ENST00000380962.9

LCMT1-201, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 2

Gene LCMT1, Length 1,529 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-201ENST00000380962 SMC4Q9NTJ3 1288 aa17.08■□□□□ 0.32
LCMT1-201ENST00000380962 IFT57Q9NWB7 429 aa17.08■□□□□ 0.32
LCMT1-201ENST00000380962 ZBTB47Q9UFB7 747 aaPredicted RBP17.08■□□□□ 0.32
LCMT1-201ENST00000380962 PPM1GO15355 546 aaPredicted RBP17.07■□□□□ 0.32
LCMT1-201ENST00000380962 RLBP1P12271 317 aa17.07■□□□□ 0.32
LCMT1-201ENST00000380962 GNAI1P63096 354 aa17.07■□□□□ 0.32
LCMT1-201ENST00000380962 FTSJ3Q8IY81 847 aaKnown RBP17.07■□□□□ 0.32
LCMT1-201ENST00000380962 IGHDP01880 384 aa17.06■□□□□ 0.32
LCMT1-201ENST00000380962 ATF7IPQ6VMQ6 1270 aa17.06■□□□□ 0.32
LCMT1-201ENST00000380962 RWDD1Q9H446 243 aaPredicted RBP17.06■□□□□ 0.32
LCMT1-201ENST00000380962 DDX19BQ9UMR2 479 aa17.06■□□□□ 0.32
LCMT1-201ENST00000380962 CEP170BQ9Y4F5 1589 aaPredicted RBP17.06■□□□□ 0.32
LCMT1-201ENST00000380962 ZNF853P0CG23 659 aa17.06■□□□□ 0.32
LCMT1-201ENST00000380962 SSH1Q8WYL5 1049 aa17.06■□□□□ 0.32
LCMT1-201ENST00000380962 NCKAP5LQ9HCH0 1330 aa17.06■□□□□ 0.32
LCMT1-201ENST00000380962 SLC26A8Q96RN1 970 aa17.05■□□□□ 0.32
LCMT1-201ENST00000380962 ZRANB1Q9UGI0 708 aa17.05■□□□□ 0.32
LCMT1-201ENST00000380962 C8orf34Q49A92 452 aa17.04■□□□□ 0.32
LCMT1-201ENST00000380962 ARHGAP45Q92619 1136 aa17.03■□□□□ 0.32
LCMT1-201ENST00000380962 BCL2L13Q9BXK5 485 aa17.03■□□□□ 0.32
LCMT1-201ENST00000380962 CHMP4BQ9H444 224 aaKnown RBP17.03■□□□□ 0.32
LCMT1-201ENST00000380962 VIRMAQ69YN4 1812 aaKnown RBP17.03■□□□□ 0.32
LCMT1-201ENST00000380962 ZNF142P52746 1687 aaPredicted RBP17.02■□□□□ 0.32
LCMT1-201ENST00000380962 USP54Q70EL1 1684 aa17.02■□□□□ 0.32
LCMT1-201ENST00000380962 TRIM27P14373 513 aa17.02■□□□□ 0.32
LCMT1-201ENST00000380962 PHACTR3Q96KR7 559 aa17.02■□□□□ 0.32
LCMT1-201ENST00000380962 RGPD1P0DJD0 1748 aa17.02■□□□□ 0.31
LCMT1-201ENST00000380962 KIF24Q5T7B8 1368 aa17.02■□□□□ 0.31
LCMT1-201ENST00000380962 HMOX1P09601 288 aa17.01■□□□□ 0.31
LCMT1-201ENST00000380962 FBLN1P23142 703 aa17.01■□□□□ 0.31
LCMT1-201ENST00000380962 HDAC1Q13547 482 aaPredicted RBP17.01■□□□□ 0.31
LCMT1-201ENST00000380962 RRS1Q15050 365 aaKnown RBP17.01■□□□□ 0.31
LCMT1-201ENST00000380962 PCDHB15Q9Y5E8 787 aa17.01■□□□□ 0.31
LCMT1-201ENST00000380962 ARHGEF10O15013 1369 aa17.01■□□□□ 0.31
LCMT1-201ENST00000380962 HAP1P54257 671 aaPredicted RBP17.01■□□□□ 0.31
LCMT1-201ENST00000380962 CFAP44Q96MT7 982 aa17.01■□□□□ 0.31
LCMT1-201ENST00000380962 EIF4A2Q14240 407 aaKnown RBP17■□□□□ 0.31
LCMT1-201ENST00000380962 SKAP1Q86WV1 359 aa17■□□□□ 0.31
LCMT1-201ENST00000380962 NOB1Q9ULX3 412 aaKnown RBP17■□□□□ 0.31
LCMT1-201ENST00000380962 FMN2Q9NZ56 1722 aa16.99■□□□□ 0.31
LCMT1-201ENST00000380962 RGS3P49796 1198 aa16.99■□□□□ 0.31
LCMT1-201ENST00000380962 TNNQ9UQP3 1299 aa16.99■□□□□ 0.31
LCMT1-201ENST00000380962 SBNO1A3KN83 1393 aa16.99■□□□□ 0.31
LCMT1-201ENST00000380962 DLG5Q8TDM6 1919 aa16.98■□□□□ 0.31
LCMT1-201ENST00000380962 PEAK1Q9H792 1746 aa16.98■□□□□ 0.31
LCMT1-201ENST00000380962 PAK3O75914 559 aaPredicted RBP16.98■□□□□ 0.31
LCMT1-201ENST00000380962 VAMP4O75379 141 aa16.97■□□□□ 0.31
LCMT1-201ENST00000380962 NPM2Q86SE8 214 aaKnown RBP16.97■□□□□ 0.31
LCMT1-201ENST00000380962 FLT4P35916 1363 aa16.97■□□□□ 0.31
LCMT1-201ENST00000380962 ZBTB40Q9NUA8 1239 aa16.96■□□□□ 0.3
LCMT1-201ENST00000380962 ITPRIPQ8IWB1 547 aa16.95■□□□□ 0.3
LCMT1-201ENST00000380962 MRPL50Q8N5N7 158 aaKnown RBP16.95■□□□□ 0.3
LCMT1-201ENST00000380962 NGDNQ8NEJ9 315 aaKnown RBP16.95■□□□□ 0.3
LCMT1-201ENST00000380962 MBIPQ9NS73 344 aa16.95■□□□□ 0.3
LCMT1-201ENST00000380962 PIK3C2AO00443 1686 aa16.94■□□□□ 0.3
LCMT1-201ENST00000380962 KDRP35968 1356 aa16.94■□□□□ 0.3
LCMT1-201ENST00000380962 PDZRN3Q9UPQ7 1066 aa16.94■□□□□ 0.3
LCMT1-201ENST00000380962 ADAMTSL3P82987 1691 aa16.93■□□□□ 0.3
LCMT1-201ENST00000380962 CHD2O14647 1828 aaKnown RBP16.93■□□□□ 0.3
LCMT1-201ENST00000380962 KIAA0232Q92628 1395 aa16.93■□□□□ 0.3
LCMT1-201ENST00000380962 SULT6B1Q6IMI4 303 aa16.93■□□□□ 0.3
LCMT1-201ENST00000380962 ANKLE2Q86XL3 938 aa16.93■□□□□ 0.3
LCMT1-201ENST00000380962 TMEM57Q8N5G2 664 aa16.93■□□□□ 0.3
LCMT1-201ENST00000380962 KCNA6P17658 529 aa16.92■□□□□ 0.3
LCMT1-201ENST00000380962 SMC5Q8IY18 1101 aa16.92■□□□□ 0.3
LCMT1-201ENST00000380962 LAS1LQ9Y4W2 734 aaKnown RBP16.92■□□□□ 0.3
LCMT1-201ENST00000380962 MAP3K19Q56UN5 1328 aa16.92■□□□□ 0.3
LCMT1-201ENST00000380962 SETD1BQ9UPS6 1966 aaKnown RBP16.92■□□□□ 0.3
LCMT1-201ENST00000380962 TWISTNBQ3B726 338 aaPredicted RBP16.91■□□□□ 0.3
LCMT1-201ENST00000380962 API5Q9BZZ5 524 aaKnown RBP16.91■□□□□ 0.3
LCMT1-201ENST00000380962 ABCC4O15439 1325 aa16.91■□□□□ 0.3
LCMT1-201ENST00000380962 RTL1A6NKG5 1358 aa16.9■□□□□ 0.3
LCMT1-201ENST00000380962 RGPD8O14715 1765 aaPredicted RBP16.9■□□□□ 0.3
LCMT1-201ENST00000380962 CHL1O00533 1208 aa16.9■□□□□ 0.3
LCMT1-201ENST00000380962 HSP90AB2PQ58FF8 381 aa16.9■□□□□ 0.3
LCMT1-201ENST00000380962 THUMPD2Q9BTF0 503 aaKnown RBP16.9■□□□□ 0.3
LCMT1-201ENST00000380962 IGSF1Q8N6C5 1336 aa16.89■□□□□ 0.3
LCMT1-201ENST00000380962 NUTM2FA1L443 756 aa16.89■□□□□ 0.29
LCMT1-201ENST00000380962 HTATSF1O43719 755 aaKnown RBP16.89■□□□□ 0.29
LCMT1-201ENST00000380962 AEBP1Q8IUX7 1158 aa16.88■□□□□ 0.29
LCMT1-201ENST00000380962 TSPYL6Q8N831 410 aa16.87■□□□□ 0.29
LCMT1-201ENST00000380962 GAS2L2Q8NHY3 880 aa16.87■□□□□ 0.29
LCMT1-201ENST00000380962 MARF1Q9Y4F3 1742 aaKnown RBP16.87■□□□□ 0.29
LCMT1-201ENST00000380962 CRB1P82279 1406 aa16.87■□□□□ 0.29
LCMT1-201ENST00000380962 ADGRL3Q9HAR2 1447 aa16.87■□□□□ 0.29
LCMT1-201ENST00000380962 USP35Q9P2H5 1018 aa16.86■□□□□ 0.29
LCMT1-201ENST00000380962 ZBTB7BO15156 539 aaPredicted RBP16.86■□□□□ 0.29
LCMT1-201ENST00000380962 AMPHP49418 695 aa16.86■□□□□ 0.29
LCMT1-201ENST00000380962 C8orf58Q8NAV2 365 aa16.86■□□□□ 0.29
LCMT1-201ENST00000380962 UPF2Q9HAU5 1272 aaKnown RBP16.86■□□□□ 0.29
LCMT1-201ENST00000380962 PLPPR3Q6T4P5 718 aa16.85■□□□□ 0.29
LCMT1-201ENST00000380962 GCC1Q96CN9 775 aa16.85■□□□□ 0.29
LCMT1-201ENST00000380962 DAXXQ9UER7 740 aaPredicted RBP16.85■□□□□ 0.29
LCMT1-201ENST00000380962 SOS1Q07889 1333 aaPredicted RBP16.85■□□□□ 0.29
LCMT1-201ENST00000380962 FAM83GA6ND36 823 aa16.84■□□□□ 0.29
LCMT1-201ENST00000380962 NLRP6P59044 892 aa16.84■□□□□ 0.29
LCMT1-201ENST00000380962 LRRC37A3O60309 1634 aa16.83■□□□□ 0.29
LCMT1-201ENST00000380962 USP19O94966 1318 aa16.83■□□□□ 0.28
LCMT1-201ENST00000380962 PTPRCP08575 1304 aa16.83■□□□□ 0.28
LCMT1-201ENST00000380962 NUCB1Q02818 461 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms