RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 XIRP1Q702N8 1843 aaKnown RBP24.89■■□□□ 1.57
GMDS-201ENST00000380805 NGDNQ8NEJ9 315 aaKnown RBP24.89■■□□□ 1.57
GMDS-201ENST00000380805 PMFBP1Q8TBY8 1022 aa24.89■■□□□ 1.57
GMDS-201ENST00000380805 PHACTR3Q96KR7 559 aa24.87■■□□□ 1.57
GMDS-201ENST00000380805 HMOX1P09601 288 aa24.86■■□□□ 1.57
GMDS-201ENST00000380805 KIF24Q5T7B8 1368 aa24.86■■□□□ 1.57
GMDS-201ENST00000380805 AAMPQ13685 434 aa24.86■■□□□ 1.57
GMDS-201ENST00000380805 EIF4A2Q14240 407 aaKnown RBP24.86■■□□□ 1.57
GMDS-201ENST00000380805 CENPQQ7L2Z9 268 aaPredicted RBP24.86■■□□□ 1.57
GMDS-201ENST00000380805 SBNO1A3KN83 1393 aa24.85■■□□□ 1.57
GMDS-201ENST00000380805 TCERG1O14776 1098 aaKnown RBP24.85■■□□□ 1.57
GMDS-201ENST00000380805 TSR2Q969E8 191 aaKnown RBP24.85■■□□□ 1.57
GMDS-201ENST00000380805 CALD1Q05682 793 aaKnown RBP24.84■■□□□ 1.57
GMDS-201ENST00000380805 FLT4P35916 1363 aa24.84■■□□□ 1.57
GMDS-201ENST00000380805 C14orf37Q86TY3 774 aa24.83■■□□□ 1.57
GMDS-201ENST00000380805 EXOSC9Q06265 439 aaKnown RBP24.83■■□□□ 1.57
GMDS-201ENST00000380805 ARHGEF10O15013 1369 aa24.82■■□□□ 1.56
GMDS-201ENST00000380805 LMOD3Q0VAK6 560 aa24.82■■□□□ 1.56
GMDS-201ENST00000380805 MAP3K19Q56UN5 1328 aa24.82■■□□□ 1.56
GMDS-201ENST00000380805 MS4A1P11836 297 aa24.81■■□□□ 1.56
GMDS-201ENST00000380805 CANXP27824 592 aaKnown RBP24.8■■□□□ 1.56
GMDS-201ENST00000380805 ZNF428Q96B54 188 aa24.8■■□□□ 1.56
GMDS-201ENST00000380805 NCOA3Q9Y6Q9 1424 aa24.79■■□□□ 1.56
GMDS-201ENST00000380805 KDRP35968 1356 aa24.78■■□□□ 1.56
GMDS-201ENST00000380805 ZNF853P0CG23 659 aa24.78■■□□□ 1.56
GMDS-201ENST00000380805 IFT57Q9NWB7 429 aa24.78■■□□□ 1.56
GMDS-201ENST00000380805 HSP90AB2PQ58FF8 381 aa24.78■■□□□ 1.56
GMDS-201ENST00000380805 C19orf44Q9H6X5 657 aa24.78■■□□□ 1.56
GMDS-201ENST00000380805 PHF8Q9UPP1 1060 aa24.78■■□□□ 1.56
GMDS-201ENST00000380805 PHRF1Q9P1Y6 1649 aaKnown RBP24.77■■□□□ 1.56
GMDS-201ENST00000380805 PANK1Q8TE04 598 aa24.77■■□□□ 1.56
GMDS-201ENST00000380805 CERKQ8TCT0 537 aa24.76■■□□□ 1.55
GMDS-201ENST00000380805 FRAT1Q92837 279 aaPredicted RBP24.76■■□□□ 1.55
GMDS-201ENST00000380805 CLUAP1Q96AJ1 413 aa24.76■■□□□ 1.55
GMDS-201ENST00000380805 BRPF1P55201 1214 aaPredicted RBP24.75■■□□□ 1.55
GMDS-201ENST00000380805 GNAI1P63096 354 aa24.75■■□□□ 1.55
GMDS-201ENST00000380805 ALDH1L2Q3SY69 923 aa24.75■■□□□ 1.55
GMDS-201ENST00000380805 ZKSCAN2Q63HK3 967 aa24.75■■□□□ 1.55
GMDS-201ENST00000380805 COG6Q9Y2V7 657 aa24.75■■□□□ 1.55
GMDS-201ENST00000380805 RLBP1P12271 317 aa24.74■■□□□ 1.55
GMDS-201ENST00000380805 SULT6B1Q6IMI4 303 aa24.74■■□□□ 1.55
GMDS-201ENST00000380805 LTN1O94822 1766 aa24.74■■□□□ 1.55
GMDS-201ENST00000380805 MSH6P52701 1360 aa24.74■■□□□ 1.55
GMDS-201ENST00000380805 AEBP1Q8IUX7 1158 aa24.73■■□□□ 1.55
GMDS-201ENST00000380805 SSH1Q8WYL5 1049 aa24.73■■□□□ 1.55
GMDS-201ENST00000380805 BCL2L13Q9BXK5 485 aa24.73■■□□□ 1.55
GMDS-201ENST00000380805 RTL1A6NKG5 1358 aa24.73■■□□□ 1.55
GMDS-201ENST00000380805 NFAT5O94916 1531 aa24.72■■□□□ 1.55
GMDS-201ENST00000380805 NLRP6P59044 892 aa24.72■■□□□ 1.55
GMDS-201ENST00000380805 KIF1AQ12756 1690 aa24.72■■□□□ 1.55
GMDS-201ENST00000380805 SMC4Q9NTJ3 1288 aa24.72■■□□□ 1.55
GMDS-201ENST00000380805 IGSF1Q8N6C5 1336 aa24.72■■□□□ 1.55
GMDS-201ENST00000380805 CFAP44Q96MT7 982 aa24.71■■□□□ 1.55
GMDS-201ENST00000380805 KIF16BQ96L93 1317 aa24.71■■□□□ 1.55
GMDS-201ENST00000380805 ATF3P18847 181 aa24.69■■□□□ 1.54
GMDS-201ENST00000380805 TRPM3Q9HCF6 1732 aaPredicted RBP24.69■■□□□ 1.54
GMDS-201ENST00000380805 MVPQ14764 893 aaKnown RBP24.69■■□□□ 1.54
GMDS-201ENST00000380805 TNNQ9UQP3 1299 aa24.69■■□□□ 1.54
GMDS-201ENST00000380805 DZIP1LQ8IYY4 767 aaKnown RBP24.68■■□□□ 1.54
GMDS-201ENST00000380805 THUMPD2Q9BTF0 503 aaKnown RBP24.68■■□□□ 1.54
GMDS-201ENST00000380805 ABTB2Q8N961 1025 aa24.67■■□□□ 1.54
GMDS-201ENST00000380805 AMPHP49418 695 aa24.66■■□□□ 1.54
GMDS-201ENST00000380805 ATF7IPQ6VMQ6 1270 aa24.66■■□□□ 1.54
GMDS-201ENST00000380805 CADPS2Q86UW7 1296 aa24.66■■□□□ 1.54
GMDS-201ENST00000380805 MBIPQ9NS73 344 aa24.66■■□□□ 1.54
GMDS-201ENST00000380805 DCCP43146 1447 aa24.66■■□□□ 1.54
GMDS-201ENST00000380805 LRRC37A3O60309 1634 aa24.66■■□□□ 1.54
GMDS-201ENST00000380805 TRIM27P14373 513 aa24.66■■□□□ 1.54
GMDS-201ENST00000380805 HOXC9P31274 260 aa24.66■■□□□ 1.54
GMDS-201ENST00000380805 SLIT3O75094 1523 aa24.66■■□□□ 1.54
GMDS-201ENST00000380805 VAMP4O75379 141 aa24.65■■□□□ 1.54
GMDS-201ENST00000380805 MST1RQ04912 1400 aa24.65■■□□□ 1.54
GMDS-201ENST00000380805 SOX12O15370 315 aa24.64■■□□□ 1.54
GMDS-201ENST00000380805 IPO8O15397 1037 aaKnown RBP24.63■■□□□ 1.53
GMDS-201ENST00000380805 IGHDP01880 384 aa24.63■■□□□ 1.53
GMDS-201ENST00000380805 FTSJ3Q8IY81 847 aaKnown RBP24.63■■□□□ 1.53
GMDS-201ENST00000380805 EYA1Q99502 592 aa24.63■■□□□ 1.53
GMDS-201ENST00000380805 BACH2Q9BYV9 841 aa24.63■■□□□ 1.53
GMDS-201ENST00000380805 ESCO1Q5FWF5 840 aa24.62■■□□□ 1.53
GMDS-201ENST00000380805 SLAIN2Q9P270 581 aa24.62■■□□□ 1.53
GMDS-201ENST00000380805 CRB1P82279 1406 aa24.61■■□□□ 1.53
GMDS-201ENST00000380805 FAM83GA6ND36 823 aa24.61■■□□□ 1.53
GMDS-201ENST00000380805 PDE4AP27815 886 aa24.61■■□□□ 1.53
GMDS-201ENST00000380805 NOB1Q9ULX3 412 aaKnown RBP24.61■■□□□ 1.53
GMDS-201ENST00000380805 ARHGAP45Q92619 1136 aa24.61■■□□□ 1.53
GMDS-201ENST00000380805 LAS1LQ9Y4W2 734 aaKnown RBP24.61■■□□□ 1.53
GMDS-201ENST00000380805 C1orf167Q5SNV9 1468 aa24.6■■□□□ 1.53
GMDS-201ENST00000380805 PAK3O75914 559 aaPredicted RBP24.6■■□□□ 1.53
GMDS-201ENST00000380805 ORAI2Q96SN7 254 aa24.6■■□□□ 1.53
GMDS-201ENST00000380805 KIAA0232Q92628 1395 aa24.59■■□□□ 1.53
GMDS-201ENST00000380805 UBAP1LF5GYI3 381 aa24.59■■□□□ 1.53
GMDS-201ENST00000380805 DDX19BQ9UMR2 479 aa24.59■■□□□ 1.53
GMDS-201ENST00000380805 CHL1O00533 1208 aa24.58■■□□□ 1.53
GMDS-201ENST00000380805 PSME1Q06323 249 aa24.58■■□□□ 1.53
GMDS-201ENST00000380805 MRPL50Q8N5N7 158 aaKnown RBP24.58■■□□□ 1.53
GMDS-201ENST00000380805 PCDHB15Q9Y5E8 787 aa24.58■■□□□ 1.53
GMDS-201ENST00000380805 TSPYL6Q8N831 410 aa24.58■■□□□ 1.52
GMDS-201ENST00000380805 KCNH5Q8NCM2 988 aa24.58■■□□□ 1.52
GMDS-201ENST00000380805 ALS2Q96Q42 1657 aa24.58■■□□□ 1.52
GMDS-201ENST00000380805 VIRMAQ69YN4 1812 aaKnown RBP24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms