RNA–Protein interactions for RNA: ENST00000380249.5

FOCAD-202, Transcript of focadhesin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOCAD, Length 6,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-202ENST00000380249 HOXC9P31274 260 aa8.35□□□□□ -1.07
FOCAD-202ENST00000380249 UNC5CLQ8IV45 518 aa8.35□□□□□ -1.07
FOCAD-202ENST00000380249 SLIT2O94813 1529 aa8.35□□□□□ -1.07
FOCAD-202ENST00000380249 NFAT5O94916 1531 aa8.35□□□□□ -1.07
FOCAD-202ENST00000380249 ADAMTS2O95450 1211 aa8.34□□□□□ -1.07
FOCAD-202ENST00000380249 THRAP3Q9Y2W1 955 aaKnown RBP8.34□□□□□ -1.07
FOCAD-202ENST00000380249 CARD10Q9BWT7 1032 aa8.34□□□□□ -1.07
FOCAD-202ENST00000380249 FAM83GA6ND36 823 aa8.34□□□□□ -1.07
FOCAD-202ENST00000380249 CSB-PGBD3P0DP91 1061 aa8.34□□□□□ -1.07
FOCAD-202ENST00000380249 EVA1CP58658 441 aa8.34□□□□□ -1.07
FOCAD-202ENST00000380249 VPS72Q15906 364 aa8.34□□□□□ -1.07
FOCAD-202ENST00000380249 EMILIN1Q9Y6C2 1016 aa8.34□□□□□ -1.07
FOCAD-202ENST00000380249 PIK3C2AO00443 1686 aa8.34□□□□□ -1.07
FOCAD-202ENST00000380249 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.33□□□□□ -1.082e-6■■■■□ 20.2
FOCAD-202ENST00000380249 SOX12O15370 315 aa8.33□□□□□ -1.08
FOCAD-202ENST00000380249 BTG4Q9NY30 223 aa8.33□□□□□ -1.08
FOCAD-202ENST00000380249 PPM1GO15355 546 aaPredicted RBP8.32□□□□□ -1.08
FOCAD-202ENST00000380249 C8orf37Q96NL8 207 aa8.32□□□□□ -1.08
FOCAD-202ENST00000380249 PHF23Q9BUL5 403 aaPredicted RBP8.32□□□□□ -1.08
FOCAD-202ENST00000380249 RRS1Q15050 365 aaKnown RBP8.32□□□□□ -1.08
FOCAD-202ENST00000380249 ANKRD24Q8TF21 1146 aa8.32□□□□□ -1.08
FOCAD-202ENST00000380249 TNNT2P45379 298 aaPredicted RBP8.32□□□□□ -1.08
FOCAD-202ENST00000380249 NLRP2Q9NX02 1062 aa8.32□□□□□ -1.08
FOCAD-202ENST00000380249 USP21Q9UK80 565 aa8.32□□□□□ -1.08
FOCAD-202ENST00000380249 CHRNA2Q15822 529 aa8.32□□□□□ -1.08
FOCAD-202ENST00000380249 HSP90AB2PQ58FF8 381 aa8.32□□□□□ -1.08
FOCAD-202ENST00000380249 AFF2P51816 1311 aa8.32□□□□□ -1.08
FOCAD-202ENST00000380249 PHRF1Q9P1Y6 1649 aaKnown RBP8.32□□□□□ -1.08
FOCAD-202ENST00000380249 FCHSD2O94868 740 aa8.32□□□□□ -1.08
FOCAD-202ENST00000380249 NCBP3Q53F19 620 aaKnown RBP8.32□□□□□ -1.08
FOCAD-202ENST00000380249 RAPGEF4Q8WZA2 1011 aa8.31□□□□□ -1.08
FOCAD-202ENST00000380249 IGSF1Q8N6C5 1336 aa8.31□□□□□ -1.08
FOCAD-202ENST00000380249 CRB1P82279 1406 aa8.31□□□□□ -1.08
FOCAD-202ENST00000380249 RBM6P78332 1123 aaKnown RBP8.31□□□□□ -1.08
FOCAD-202ENST00000380249 TOM1L2Q6ZVM7 507 aa8.31□□□□□ -1.08
FOCAD-202ENST00000380249 MRS2Q9HD23 443 aa8.31□□□□□ -1.08
FOCAD-202ENST00000380249 BARGINQ6ZT62 677 aa8.31□□□□□ -1.08
FOCAD-202ENST00000380249 KDRP35968 1356 aa8.31□□□□□ -1.08
FOCAD-202ENST00000380249 WDR43Q15061 677 aaKnown RBP eCLIP8.3□□□□□ -1.08
FOCAD-202ENST00000380249 TCP11L2Q8N4U5 519 aa8.3□□□□□ -1.08
FOCAD-202ENST00000380249 AMOTQ4VCS5 1084 aa8.3□□□□□ -1.08
FOCAD-202ENST00000380249 COL5A2P05997 1499 aaPredicted RBP8.3□□□□□ -1.08
FOCAD-202ENST00000380249 IL13P35225 146 aa8.3□□□□□ -1.08
FOCAD-202ENST00000380249 EIF4A2Q14240 407 aaKnown RBP8.3□□□□□ -1.08
FOCAD-202ENST00000380249 NCAPD2Q15021 1401 aa8.3□□□□□ -1.08
FOCAD-202ENST00000380249 ONECUT3O60422 494 aaPredicted RBP8.3□□□□□ -1.08
FOCAD-202ENST00000380249 BCL9LQ86UU0 1499 aa8.3□□□□□ -1.08
FOCAD-202ENST00000380249 LRP6O75581 1613 aa8.3□□□□□ -1.08
FOCAD-202ENST00000380249 ANKRD26Q9UPS8 1709 aa8.3□□□□□ -1.08
FOCAD-202ENST00000380249 COL14A1Q05707 1796 aaKnown RBP8.3□□□□□ -1.08
FOCAD-202ENST00000380249 HMGB2P26583 209 aaKnown RBP8.29□□□□□ -1.08
FOCAD-202ENST00000380249 ZBTB7CA1YPR0 619 aa8.29□□□□□ -1.08
FOCAD-202ENST00000380249 AXIN2Q9Y2T1 843 aa8.29□□□□□ -1.08
FOCAD-202ENST00000380249 SPATA31A5Q5VU36 1347 aa8.29□□□□□ -1.08
FOCAD-202ENST00000380249 SPATA31A7Q8IWB4 1347 aa8.29□□□□□ -1.08
FOCAD-202ENST00000380249 TATP17735 454 aaPredicted RBP8.29□□□□□ -1.08
FOCAD-202ENST00000380249 CAMTA1Q9Y6Y1 1673 aa8.29□□□□□ -1.08
FOCAD-202ENST00000380249 U2AF1L5P0DN76 240 aaPredicted RBP8.29□□□□□ -1.08
FOCAD-202ENST00000380249 U2AF1Q01081 240 aaKnown RBP eCLIP8.29□□□□□ -1.08
FOCAD-202ENST00000380249 KIF20BQ96Q89 1820 aa8.29□□□□□ -1.08
FOCAD-202ENST00000380249 GJD4Q96KN9 370 aaPredicted RBP8.28□□□□□ -1.08
FOCAD-202ENST00000380249 EYA1Q99502 592 aa8.28□□□□□ -1.08
FOCAD-202ENST00000380249 STRN4Q9NRL3 753 aa8.28□□□□□ -1.08
FOCAD-202ENST00000380249 PLEKHG5O94827 1062 aa8.28□□□□□ -1.08
FOCAD-202ENST00000380249 IL2RBP14784 551 aa8.28□□□□□ -1.08
FOCAD-202ENST00000380249 QTRT2Q9H974 415 aaKnown RBP8.28□□□□□ -1.08
FOCAD-202ENST00000380249 SPATA31A1Q5TZJ5 1347 aa8.28□□□□□ -1.08
FOCAD-202ENST00000380249 ATRNO75882 1429 aa8.28□□□□□ -1.08
FOCAD-202ENST00000380249 HSP90AB1P08238 724 aaKnown RBP8.28□□□□□ -1.08
FOCAD-202ENST00000380249 PLEKHO1Q53GL0 409 aaPredicted RBP8.28□□□□□ -1.08
FOCAD-202ENST00000380249 GAS2L2Q8NHY3 880 aa8.27□□□□□ -1.09
FOCAD-202ENST00000380249 CCDC9Q9Y3X0 531 aaKnown RBP8.27□□□□□ -1.09
FOCAD-202ENST00000380249 U2SURPO15042 1029 aaKnown RBP8.27□□□□□ -1.09
FOCAD-202ENST00000380249 LARP1Q6PKG0 1096 aaKnown RBP8.27□□□□□ -1.09
FOCAD-202ENST00000380249 PNISRQ8TF01 805 aaKnown RBP8.27□□□□□ -1.09
FOCAD-202ENST00000380249 LTV1Q96GA3 475 aaPredicted RBP8.27□□□□□ -1.09
FOCAD-202ENST00000380249 NWD2Q9ULI1 1742 aa8.27□□□□□ -1.09
FOCAD-202ENST00000380249 MAPK8IP3Q9UPT6 1336 aa8.27□□□□□ -1.09
FOCAD-202ENST00000380249 CNGB1Q14028 1251 aaPredicted RBP8.27□□□□□ -1.09
FOCAD-202ENST00000380249 NBPF6Q5VWK0 638 aa8.27□□□□□ -1.09
FOCAD-202ENST00000380249 NBPF4Q96M43 638 aa8.27□□□□□ -1.09
FOCAD-202ENST00000380249 SPG7Q9UQ90 795 aa8.27□□□□□ -1.09
FOCAD-202ENST00000380249 LMOD3Q0VAK6 560 aa8.26□□□□□ -1.09
FOCAD-202ENST00000380249 RXRBP28702 533 aa8.26□□□□□ -1.09
FOCAD-202ENST00000380249 LMO7Q8WWI1 1683 aa8.26□□□□□ -1.09
FOCAD-202ENST00000380249 EXOC5O00471 708 aa8.26□□□□□ -1.09
FOCAD-202ENST00000380249 SULT6B1Q6IMI4 303 aa8.26□□□□□ -1.09
FOCAD-202ENST00000380249 CRYBG1Q9Y4K1 1723 aa8.26□□□□□ -1.09
FOCAD-202ENST00000380249 FBLN1P23142 703 aa8.25□□□□□ -1.09
FOCAD-202ENST00000380249 COL3A1P02461 1466 aaPredicted RBP8.25□□□□□ -1.09
FOCAD-202ENST00000380249 HTATSF1O43719 755 aaKnown RBP8.25□□□□□ -1.09
FOCAD-202ENST00000380249 DDB1Q16531 1140 aa8.25□□□□□ -1.09
FOCAD-202ENST00000380249 RUNDC1Q96C34 613 aa8.24□□□□□ -1.09
FOCAD-202ENST00000380249 CALD1Q05682 793 aaKnown RBP8.24□□□□□ -1.09
FOCAD-202ENST00000380249 PDE3BQ13370 1112 aa8.24□□□□□ -1.09
FOCAD-202ENST00000380249 ABCA3Q99758 1704 aa8.24□□□□□ -1.09
FOCAD-202ENST00000380249 IFNL2Q8IZJ0 200 aa8.24□□□□□ -1.09
FOCAD-202ENST00000380249 ZCRB1Q8TBF4 217 aaKnown RBP8.23□□□□□ -1.09
FOCAD-202ENST00000380249 COL18A1P39060 1754 aa8.23□□□□□ -1.09
FOCAD-202ENST00000380249 OVOS2A0A0G2JMS6 1433 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms