RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 ZNF853P0CG23 659 aa10.21□□□□□ -0.77
NHLRC3-201ENST00000379599 GPS2Q13227 327 aa10.21□□□□□ -0.77
NHLRC3-201ENST00000379599 ELF2Q15723 593 aa10.21□□□□□ -0.77
NHLRC3-201ENST00000379599 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.21□□□□□ -0.77
NHLRC3-201ENST00000379599 SGSM3Q96HU1 749 aa10.21□□□□□ -0.77
NHLRC3-201ENST00000379599 RRP15Q9Y3B9 282 aaKnown RBP10.21□□□□□ -0.77
NHLRC3-201ENST00000379599 TEX14Q8IWB6 1497 aa10.21□□□□□ -0.77
NHLRC3-201ENST00000379599 CADPSQ9ULU8 1353 aa10.21□□□□□ -0.78
NHLRC3-201ENST00000379599 ATP2B1P20020 1258 aa10.21□□□□□ -0.78
NHLRC3-201ENST00000379599 MUM1L1Q5H9M0 696 aa10.21□□□□□ -0.78
NHLRC3-201ENST00000379599 LRCH2Q5VUJ6 765 aa10.21□□□□□ -0.78
NHLRC3-201ENST00000379599 ANKRD30BQ9BXX2 1392 aa10.21□□□□□ -0.78
NHLRC3-201ENST00000379599 ZNF521Q96K83 1311 aa10.2□□□□□ -0.78
NHLRC3-201ENST00000379599 HTATSF1O43719 755 aaKnown RBP10.2□□□□□ -0.78
NHLRC3-201ENST00000379599 PPP2R5AQ15172 486 aa10.2□□□□□ -0.78
NHLRC3-201ENST00000379599 TPD52L1Q16890 204 aaPredicted RBP10.2□□□□□ -0.78
NHLRC3-201ENST00000379599 RGL3Q3MIN7 710 aa10.2□□□□□ -0.78
NHLRC3-201ENST00000379599 MNS1Q8NEH6 495 aa10.2□□□□□ -0.78
NHLRC3-201ENST00000379599 ZBTB12Q9Y330 459 aaPredicted RBP10.2□□□□□ -0.78
NHLRC3-201ENST00000379599 PAXBP1Q9Y5B6 917 aa10.2□□□□□ -0.78
NHLRC3-201ENST00000379599 TPM3P06753 285 aa10.2□□□□□ -0.78
NHLRC3-201ENST00000379599 KIF1BPQ96EK5 621 aa10.2□□□□□ -0.78
NHLRC3-201ENST00000379599 ZNF215Q9UL58 517 aaPredicted RBP10.2□□□□□ -0.78
NHLRC3-201ENST00000379599 KIAA1107Q9UPP5 1409 aa10.2□□□□□ -0.78
NHLRC3-201ENST00000379599 CCDC144AA2RUR9 1427 aa10.19□□□□□ -0.78
NHLRC3-201ENST00000379599 PACS2Q86VP3 889 aa10.19□□□□□ -0.78
NHLRC3-201ENST00000379599 DRC7Q8IY82 874 aa10.19□□□□□ -0.78
NHLRC3-201ENST00000379599 ZGPATQ8N5A5 531 aaKnown RBP10.19□□□□□ -0.78
NHLRC3-201ENST00000379599 ARID3CA6NKF2 412 aa10.19□□□□□ -0.78
NHLRC3-201ENST00000379599 KIF1CO43896 1103 aaKnown RBP10.19□□□□□ -0.78
NHLRC3-201ENST00000379599 KDM4AO75164 1064 aa10.19□□□□□ -0.78
NHLRC3-201ENST00000379599 PTGS1P23219 599 aa10.19□□□□□ -0.78
NHLRC3-201ENST00000379599 MAP2K2P36507 400 aa10.19□□□□□ -0.78
NHLRC3-201ENST00000379599 BIRC2Q13490 618 aa10.19□□□□□ -0.78
NHLRC3-201ENST00000379599 CDCA8Q53HL2 280 aa10.19□□□□□ -0.78
NHLRC3-201ENST00000379599 SRLQ86TD4 932 aa10.19□□□□□ -0.78
NHLRC3-201ENST00000379599 ATP6V1AP38606 617 aa10.18□□□□□ -0.78
NHLRC3-201ENST00000379599 TPM4P67936 248 aa10.18□□□□□ -0.78
NHLRC3-201ENST00000379599 LNPKQ9C0E8 428 aa10.18□□□□□ -0.78
NHLRC3-201ENST00000379599 ST5P78524 1137 aa10.18□□□□□ -0.78
NHLRC3-201ENST00000379599 ANKRD20A12PQ8NF67 263 aa10.18□□□□□ -0.78
NHLRC3-201ENST00000379599 CALR3Q96L12 384 aaKnown RBP10.18□□□□□ -0.78
NHLRC3-201ENST00000379599 CYP2E1P05181 493 aaPredicted RBP10.18□□□□□ -0.78
NHLRC3-201ENST00000379599 RPAINQ86UA6 219 aa10.18□□□□□ -0.78
NHLRC3-201ENST00000379599 TRMT2AQ8IZ69 625 aaKnown RBP10.18□□□□□ -0.78
NHLRC3-201ENST00000379599 SMARCE1Q969G3 411 aa10.18□□□□□ -0.78
NHLRC3-201ENST00000379599 FAM53CQ9NYF3 392 aa10.18□□□□□ -0.78
NHLRC3-201ENST00000379599 INSRP06213 1382 aa10.17□□□□□ -0.78
NHLRC3-201ENST00000379599 DMRT2Q9Y5R5 561 aa10.17□□□□□ -0.78
NHLRC3-201ENST00000379599 PER1O15534 1290 aaPredicted RBP10.17□□□□□ -0.78
NHLRC3-201ENST00000379599 CEP135Q66GS9 1140 aa10.17□□□□□ -0.78
NHLRC3-201ENST00000379599 TTLL5Q6EMB2 1281 aa10.17□□□□□ -0.78
NHLRC3-201ENST00000379599 GDPD2Q9HCC8 539 aa10.17□□□□□ -0.78
NHLRC3-201ENST00000379599 CWC22Q9HCG8 908 aaKnown RBP10.17□□□□□ -0.78
NHLRC3-201ENST00000379599 MED4Q9NPJ6 270 aa10.17□□□□□ -0.78
NHLRC3-201ENST00000379599 CTTNBP2Q8WZ74 1663 aa10.16□□□□□ -0.78
NHLRC3-201ENST00000379599 LRMPQ12912 555 aa10.16□□□□□ -0.78
NHLRC3-201ENST00000379599 NEUROD2Q15784 382 aa10.16□□□□□ -0.78
NHLRC3-201ENST00000379599 RAI14Q9P0K7 980 aa10.16□□□□□ -0.78
NHLRC3-201ENST00000379599 ZDHHC9Q9Y397 364 aa10.16□□□□□ -0.78
NHLRC3-201ENST00000379599 THOC2Q8NI27 1593 aaKnown RBP10.16□□□□□ -0.78
NHLRC3-201ENST00000379599 ANKRD30AQ9BXX3 1397 aa10.16□□□□□ -0.78
NHLRC3-201ENST00000379599 ATG3Q9NT62 314 aa10.16□□□□□ -0.78
NHLRC3-201ENST00000379599 CFTRP13569 1480 aa10.16□□□□□ -0.78
NHLRC3-201ENST00000379599 ARHGAP31Q2M1Z3 1444 aa10.15□□□□□ -0.78
NHLRC3-201ENST00000379599 TSGA10IPQ3SY00 556 aa10.15□□□□□ -0.78
NHLRC3-201ENST00000379599 ZCCHC17Q9NP64 241 aaKnown RBP10.15□□□□□ -0.78
NHLRC3-201ENST00000379599 LMAN1P49257 510 aa10.15□□□□□ -0.78
NHLRC3-201ENST00000379599 CFAP44Q96MT7 982 aa10.15□□□□□ -0.78
NHLRC3-201ENST00000379599 HMGXB3Q12766 1538 aa10.15□□□□□ -0.78
NHLRC3-201ENST00000379599 MCTP2Q6DN12 878 aa10.15□□□□□ -0.79
NHLRC3-201ENST00000379599 CCDC186Q7Z3E2 898 aa10.15□□□□□ -0.79
NHLRC3-201ENST00000379599 EXOC6BQ9Y2D4 811 aa10.15□□□□□ -0.79
NHLRC3-201ENST00000379599 GADD45BO75293 160 aaPredicted RBP10.14□□□□□ -0.79
NHLRC3-201ENST00000379599 MAGEA9P43362 315 aa10.14□□□□□ -0.79
NHLRC3-201ENST00000379599 RABEP1Q15276 862 aa10.14□□□□□ -0.79
NHLRC3-201ENST00000379599 AK7Q96M32 723 aa10.14□□□□□ -0.79
NHLRC3-201ENST00000379599 KIF27Q86VH2 1401 aa10.14□□□□□ -0.79
NHLRC3-201ENST00000379599 RAD54L2Q9Y4B4 1467 aa10.14□□□□□ -0.79
NHLRC3-201ENST00000379599 CCDC189A1A4V9 331 aa10.14□□□□□ -0.79
NHLRC3-201ENST00000379599 PNMA6AP0CW24 399 aaPredicted RBP10.14□□□□□ -0.79
NHLRC3-201ENST00000379599 CALRP27797 417 aaKnown RBP10.14□□□□□ -0.79
NHLRC3-201ENST00000379599 PLA2G4AP47712 749 aa10.14□□□□□ -0.79
NHLRC3-201ENST00000379599 FBXO18Q8NFZ0 1043 aa10.14□□□□□ -0.79
NHLRC3-201ENST00000379599 ERO1AQ96HE7 468 aa10.14□□□□□ -0.79
NHLRC3-201ENST00000379599 ANKRD65E5RJM6 399 aa10.13□□□□□ -0.79
NHLRC3-201ENST00000379599 RARSP54136 660 aaKnown RBP10.13□□□□□ -0.79
NHLRC3-201ENST00000379599 TBC1D9Q6ZT07 1266 aa10.13□□□□□ -0.79
NHLRC3-201ENST00000379599 FHOD1Q9Y613 1164 aa10.13□□□□□ -0.79
NHLRC3-201ENST00000379599 TDRD9Q8NDG6 1382 aaKnown RBP10.13□□□□□ -0.79
NHLRC3-201ENST00000379599 HECW1Q76N89 1606 aa10.13□□□□□ -0.79
NHLRC3-201ENST00000379599 SMARCA5O60264 1052 aaPredicted RBP10.13□□□□□ -0.79
NHLRC3-201ENST00000379599 SSR1P43307 286 aaKnown RBP10.13□□□□□ -0.79
NHLRC3-201ENST00000379599 GOLGA5Q8TBA6 731 aa10.13□□□□□ -0.79
NHLRC3-201ENST00000379599 RBM28Q9NW13 759 aaKnown RBP10.13□□□□□ -0.79
NHLRC3-201ENST00000379599 ANKRD36BQ8N2N9 1353 aa10.13□□□□□ -0.79
NHLRC3-201ENST00000379599 MPHOSPH10O00566 681 aaKnown RBP10.13□□□□□ -0.79
NHLRC3-201ENST00000379599 PPP1R12AO14974 1030 aaPredicted RBP10.13□□□□□ -0.79
NHLRC3-201ENST00000379599 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.13□□□□□ -0.79
NHLRC3-201ENST00000379599 PCF11O94913 1555 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms