RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 LTN1O94822 1766 aa32.42■■■□□ 2.78
ECHDC3-201ENST00000379215 APAF1O14727 1248 aa32.42■■■□□ 2.78
ECHDC3-201ENST00000379215 MAPK8IP3Q9UPT6 1336 aa32.42■■■□□ 2.78
ECHDC3-201ENST00000379215 AHDC1Q5TGY3 1603 aaPredicted RBP32.41■■■□□ 2.78
ECHDC3-201ENST00000379215 IP6K1Q92551 441 aa32.41■■■□□ 2.78
ECHDC3-201ENST00000379215 ARHGEF25Q86VW2 580 aa32.4■■■□□ 2.78
ECHDC3-201ENST00000379215 PLEKHF1Q96S99 279 aa32.38■■■□□ 2.77
ECHDC3-201ENST00000379215 RSPH6AQ9H0K4 717 aa32.38■■■□□ 2.77
ECHDC3-201ENST00000379215 ABCC6O95255 1503 aa32.36■■■□□ 2.77
ECHDC3-201ENST00000379215 TCP11L2Q8N4U5 519 aa32.36■■■□□ 2.77
ECHDC3-201ENST00000379215 RGPD1P0DJD0 1748 aa32.35■■■□□ 2.77
ECHDC3-201ENST00000379215 SALL2Q9Y467 1007 aaPredicted RBP32.35■■■□□ 2.77
ECHDC3-201ENST00000379215 CRYBG1Q9Y4K1 1723 aa32.34■■■□□ 2.77
ECHDC3-201ENST00000379215 PRKAR2BP31323 418 aa32.33■■■□□ 2.77
ECHDC3-201ENST00000379215 CCDC27Q2M243 656 aa32.33■■■□□ 2.77
ECHDC3-201ENST00000379215 ZNF521Q96K83 1311 aa32.32■■■□□ 2.76
ECHDC3-201ENST00000379215 LRRC59Q96AG4 307 aaKnown RBP32.32■■■□□ 2.76
ECHDC3-201ENST00000379215 CPDO75976 1380 aa32.32■■■□□ 2.76
ECHDC3-201ENST00000379215 SENP3-EIF4A1A0A087X0R7 540 aa32.31■■■□□ 2.76
ECHDC3-201ENST00000379215 IGSF1Q8N6C5 1336 aa32.31■■■□□ 2.76
ECHDC3-201ENST00000379215 HMOX1P09601 288 aa32.3■■■□□ 2.76
ECHDC3-201ENST00000379215 KDRP35968 1356 aa32.28■■■□□ 2.76
ECHDC3-201ENST00000379215 ZBTB7CA1YPR0 619 aa32.28■■■□□ 2.76
ECHDC3-201ENST00000379215 PLEKHG5O94827 1062 aa32.28■■■□□ 2.76
ECHDC3-201ENST00000379215 SULT6B1Q6IMI4 303 aa32.28■■■□□ 2.76
ECHDC3-201ENST00000379215 GOLGA2Q08379 1002 aa32.26■■■□□ 2.75
ECHDC3-201ENST00000379215 PHF23Q9BUL5 403 aaPredicted RBP32.26■■■□□ 2.75
ECHDC3-201ENST00000379215 TMPOP42166 694 aaKnown RBP32.25■■■□□ 2.75
ECHDC3-201ENST00000379215 ZC3H6P61129 1189 aaKnown RBP32.25■■■□□ 2.75
ECHDC3-201ENST00000379215 EYA1Q99502 592 aa32.25■■■□□ 2.75
ECHDC3-201ENST00000379215 UBAP1LF5GYI3 381 aa32.24■■■□□ 2.75
ECHDC3-201ENST00000379215 HAP1P54257 671 aaPredicted RBP32.24■■■□□ 2.75
ECHDC3-201ENST00000379215 CABLES1Q8TDN4 633 aa32.24■■■□□ 2.75
ECHDC3-201ENST00000379215 WWC1Q8IX03 1113 aa32.22■■■□□ 2.75
ECHDC3-201ENST00000379215 ABCA3Q99758 1704 aa32.21■■■□□ 2.75
ECHDC3-201ENST00000379215 NFE2L2Q16236 605 aa32.21■■■□□ 2.75
ECHDC3-201ENST00000379215 WDR63Q8IWG1 891 aa32.21■■■□□ 2.75
ECHDC3-201ENST00000379215 CERKQ8TCT0 537 aa32.21■■■□□ 2.75
ECHDC3-201ENST00000379215 LTV1Q96GA3 475 aaPredicted RBP32.21■■■□□ 2.75
ECHDC3-201ENST00000379215 RRP7AQ9Y3A4 280 aaKnown RBP32.21■■■□□ 2.75
ECHDC3-201ENST00000379215 KIAA0232Q92628 1395 aa32.2■■■□□ 2.75
ECHDC3-201ENST00000379215 NEUROD2Q15784 382 aa32.2■■■□□ 2.75
ECHDC3-201ENST00000379215 AEBP1Q8IUX7 1158 aa32.2■■■□□ 2.75
ECHDC3-201ENST00000379215 PHLPP1O60346 1717 aa32.19■■■□□ 2.74
ECHDC3-201ENST00000379215 ANKRD24Q8TF21 1146 aa32.18■■■□□ 2.74
ECHDC3-201ENST00000379215 COL22A1Q8NFW1 1626 aaPredicted RBP32.18■■■□□ 2.74
ECHDC3-201ENST00000379215 E9PSI1 815 aa32.18■■■□□ 2.74
ECHDC3-201ENST00000379215 LMOD3Q0VAK6 560 aa32.18■■■□□ 2.74
ECHDC3-201ENST00000379215 RIPK4P57078 832 aa32.17■■■□□ 2.74
ECHDC3-201ENST00000379215 PIP4K2BP78356 416 aa32.17■■■□□ 2.74
ECHDC3-201ENST00000379215 COL16A1Q07092 1604 aaPredicted RBP32.17■■■□□ 2.74
ECHDC3-201ENST00000379215 ERBB3P21860 1342 aa32.16■■■□□ 2.74
ECHDC3-201ENST00000379215 PHACTR3Q96KR7 559 aa32.16■■■□□ 2.74
ECHDC3-201ENST00000379215 COL18A1P39060 1754 aa32.16■■■□□ 2.74
ECHDC3-201ENST00000379215 PRDM11Q9NQV5 511 aa32.15■■■□□ 2.74
ECHDC3-201ENST00000379215 NCAPD2Q15021 1401 aa32.14■■■□□ 2.74
ECHDC3-201ENST00000379215 AXIN2Q9Y2T1 843 aa32.14■■■□□ 2.74
ECHDC3-201ENST00000379215 SLFN5Q08AF3 891 aa32.13■■■□□ 2.73
ECHDC3-201ENST00000379215 CDCA7LQ96GN5 454 aa32.13■■■□□ 2.73
ECHDC3-201ENST00000379215 FAM208AQ9UK61 1670 aaKnown RBP32.12■■■□□ 2.73
ECHDC3-201ENST00000379215 CAMTA1Q9Y6Y1 1673 aa32.12■■■□□ 2.73
ECHDC3-201ENST00000379215 CALD1Q05682 793 aaKnown RBP32.11■■■□□ 2.73
ECHDC3-201ENST00000379215 NBPF6Q5VWK0 638 aa32.11■■■□□ 2.73
ECHDC3-201ENST00000379215 NBPF4Q96M43 638 aa32.11■■■□□ 2.73
ECHDC3-201ENST00000379215 TRIM35Q9UPQ4 493 aa32.11■■■□□ 2.73
ECHDC3-201ENST00000379215 IL16Q14005 1332 aa32.1■■■□□ 2.73
ECHDC3-201ENST00000379215 GAS2L2Q8NHY3 880 aa32.1■■■□□ 2.73
ECHDC3-201ENST00000379215 TRMT2AQ8IZ69 625 aaKnown RBP32.08■■■□□ 2.73
ECHDC3-201ENST00000379215 CHRNA2Q15822 529 aa32.08■■■□□ 2.73
ECHDC3-201ENST00000379215 DUSP27Q5VZP5 1158 aa32.07■■■□□ 2.72
ECHDC3-201ENST00000379215 LMO7Q8WWI1 1683 aa32.07■■■□□ 2.72
ECHDC3-201ENST00000379215 PLEKHG2Q9H7P9 1386 aa32.06■■■□□ 2.72
ECHDC3-201ENST00000379215 MYH16Q9H6N6 1097 aa32.06■■■□□ 2.72
ECHDC3-201ENST00000379215 CSB-PGBD3P0DP91 1061 aa32.04■■■□□ 2.72
ECHDC3-201ENST00000379215 RGPD5Q99666 1765 aa32.04■■■□□ 2.72
ECHDC3-201ENST00000379215 USHBP1Q8N6Y0 703 aa32.02■■■□□ 2.72
ECHDC3-201ENST00000379215 COL5A2P05997 1499 aaPredicted RBP32■■■□□ 2.71
ECHDC3-201ENST00000379215 MTHFSDQ2M296 383 aaKnown RBP32■■■□□ 2.71
ECHDC3-201ENST00000379215 NLRP2Q9NX02 1062 aa32■■■□□ 2.71
ECHDC3-201ENST00000379215 WDR17Q8IZU2 1322 aa31.99■■■□□ 2.71
ECHDC3-201ENST00000379215 HTATSF1O43719 755 aaKnown RBP31.99■■■□□ 2.71
ECHDC3-201ENST00000379215 AMOTQ4VCS5 1084 aa31.99■■■□□ 2.71
ECHDC3-201ENST00000379215 SPINK5Q9NQ38 1064 aaPredicted RBP31.99■■■□□ 2.71
ECHDC3-201ENST00000379215 RGPD2P0DJD1 1756 aa31.98■■■□□ 2.71
ECHDC3-201ENST00000379215 COL14A1Q05707 1796 aaKnown RBP31.98■■■□□ 2.71
ECHDC3-201ENST00000379215 NEFLP07196 543 aa31.97■■■□□ 2.71
ECHDC3-201ENST00000379215 DLG5Q8TDM6 1919 aa31.96■■■□□ 2.71
ECHDC3-201ENST00000379215 PLEKHO1Q53GL0 409 aaPredicted RBP31.96■■■□□ 2.71
ECHDC3-201ENST00000379215 RTF1Q92541 710 aaKnown RBP31.96■■■□□ 2.71
ECHDC3-201ENST00000379215 RCAN3Q9UKA8 241 aa31.96■■■□□ 2.71
ECHDC3-201ENST00000379215 SUPT16HQ9Y5B9 1047 aaKnown RBP31.96■■■□□ 2.71
ECHDC3-201ENST00000379215 JCADQ9P266 1359 aa31.95■■■□□ 2.71
ECHDC3-201ENST00000379215 FAM83GA6ND36 823 aa31.95■■■□□ 2.71
ECHDC3-201ENST00000379215 RAPGEF4Q8WZA2 1011 aa31.94■■■□□ 2.7
ECHDC3-201ENST00000379215 IFT57Q9NWB7 429 aa31.93■■■□□ 2.7
ECHDC3-201ENST00000379215 GTF3C3Q9Y5Q9 886 aa31.93■■■□□ 2.7
ECHDC3-201ENST00000379215 GNAI1P63096 354 aa31.92■■■□□ 2.7
ECHDC3-201ENST00000379215 MAP3K5Q99683 1374 aa31.92■■■□□ 2.7
ECHDC3-201ENST00000379215 GNAT3A8MTJ3 354 aa31.91■■■□□ 2.7
ECHDC3-201ENST00000379215 EVA1CP58658 441 aa31.91■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms