RNA–Protein interactions for RNA: ENST00000377918.7

PCDH17-201, Transcript of protocadherin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH17, Length 8,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-201ENST00000377918 WASHC4Q2M389 1173 aa17.11■□□□□ 0.33
PCDH17-201ENST00000377918 CEP57L1Q8IYX8 460 aa17.11■□□□□ 0.33
PCDH17-201ENST00000377918 BMS1Q14692 1282 aaKnown RBP17.11■□□□□ 0.33
PCDH17-201ENST00000377918 SPA17Q15506 151 aa17.11■□□□□ 0.33
PCDH17-201ENST00000377918 CCDC27Q2M243 656 aa17.11■□□□□ 0.33
PCDH17-201ENST00000377918 KIF5CO60282 957 aa17.11■□□□□ 0.33
PCDH17-201ENST00000377918 FKBP5Q13451 457 aaPredicted RBP17.1■□□□□ 0.33
PCDH17-201ENST00000377918 BRPF1P55201 1214 aaPredicted RBP17.1■□□□□ 0.33
PCDH17-201ENST00000377918 UBTFL1P0CB47 393 aaPredicted RBP17.1■□□□□ 0.33
PCDH17-201ENST00000377918 TRHP20396 242 aaPredicted RBP17.1■□□□□ 0.33
PCDH17-201ENST00000377918 CCDC102AQ96A19 550 aa17.1■□□□□ 0.33
PCDH17-201ENST00000377918 CIZ1Q9ULV3 898 aaPredicted RBP17.1■□□□□ 0.33
PCDH17-201ENST00000377918 NEMFO60524 1076 aa17.1■□□□□ 0.33
PCDH17-201ENST00000377918 PYM1Q9BRP8 204 aaKnown RBP17.1■□□□□ 0.33
PCDH17-201ENST00000377918 ARHGAP29Q52LW3 1261 aa17.1■□□□□ 0.33
PCDH17-201ENST00000377918 PLEKHH1Q9ULM0 1364 aa17.09■□□□□ 0.33
PCDH17-201ENST00000377918 SETSIPP0DME0 302 aa17.09■□□□□ 0.33
PCDH17-201ENST00000377918 SETD1BQ9UPS6 1966 aaKnown RBP17.09■□□□□ 0.33
PCDH17-201ENST00000377918 KIF20AO95235 890 aa17.09■□□□□ 0.33
PCDH17-201ENST00000377918 CGNQ9P2M7 1197 aaKnown RBP17.09■□□□□ 0.33
PCDH17-201ENST00000377918 PABPN1LA6NDY0 278 aaKnown RBP17.09■□□□□ 0.33
PCDH17-201ENST00000377918 HMGB3O15347 200 aaKnown RBP17.09■□□□□ 0.33
PCDH17-201ENST00000377918 RAB34Q9BZG1 259 aa17.09■□□□□ 0.33
PCDH17-201ENST00000377918 MLECQ14165 292 aa17.09■□□□□ 0.33
PCDH17-201ENST00000377918 PPP4R3AQ6IN85 833 aa17.09■□□□□ 0.33
PCDH17-201ENST00000377918 TSNARE1Q96NA8 513 aa17.09■□□□□ 0.33
PCDH17-201ENST00000377918 RIC3Q7Z5B4 369 aa17.08■□□□□ 0.33
PCDH17-201ENST00000377918 CCDC6Q16204 474 aa17.08■□□□□ 0.32
PCDH17-201ENST00000377918 IFI16Q16666 785 aaKnown RBP17.08■□□□□ 0.32
PCDH17-201ENST00000377918 PHAXQ9H814 394 aaKnown RBP17.08■□□□□ 0.32
PCDH17-201ENST00000377918 CAVIN2O95810 425 aa17.08■□□□□ 0.32
PCDH17-201ENST00000377918 IFFO1Q0D2I5 559 aa17.08■□□□□ 0.32
PCDH17-201ENST00000377918 CETN1Q12798 172 aa17.08■□□□□ 0.32
PCDH17-201ENST00000377918 SOGA3Q5TF21 947 aa17.08■□□□□ 0.32
PCDH17-201ENST00000377918 FBXW7Q969H0 707 aa17.07■□□□□ 0.32
PCDH17-201ENST00000377918 GCC1Q96CN9 775 aa17.07■□□□□ 0.32
PCDH17-201ENST00000377918 TANGO6Q9C0B7 1094 aa17.07■□□□□ 0.32
PCDH17-201ENST00000377918 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.07■□□□□ 0.32
PCDH17-201ENST00000377918 GON4LQ3T8J9 2241 aa17.07■□□□□ 0.32
PCDH17-201ENST00000377918 PAFAH1B1P43034 410 aa17.07■□□□□ 0.32
PCDH17-201ENST00000377918 CCDC30Q5VVM6 783 aa17.07■□□□□ 0.32
PCDH17-201ENST00000377918 PODXL2Q9NZ53 605 aa17.07■□□□□ 0.32
PCDH17-201ENST00000377918 FSD2A1L4K1 749 aa17.07■□□□□ 0.32
PCDH17-201ENST00000377918 ANKS4BQ8N8V4 417 aa17.07■□□□□ 0.32
PCDH17-201ENST00000377918 CTNNA3Q9UI47 895 aa17.07■□□□□ 0.32
PCDH17-201ENST00000377918 CTAGE5O15320 804 aa17.07■□□□□ 0.32
PCDH17-201ENST00000377918 DIAPH1O60610 1272 aaKnown RBP17.07■□□□□ 0.32
PCDH17-201ENST00000377918 USO1O60763 962 aaKnown RBP17.07■□□□□ 0.32
PCDH17-201ENST00000377918 FILIP1Q7Z7B0 1213 aa17.07■□□□□ 0.32
PCDH17-201ENST00000377918 FAM114A2Q9NRY5 505 aa17.07■□□□□ 0.32
PCDH17-201ENST00000377918 BCCIPQ9P287 314 aaKnown RBP eCLIP17.07■□□□□ 0.32
PCDH17-201ENST00000377918 SSX2IPQ9Y2D8 614 aa17.06■□□□□ 0.32
PCDH17-201ENST00000377918 CYP46A1Q9Y6A2 500 aa17.06■□□□□ 0.32
PCDH17-201ENST00000377918 CFAP65Q6ZU64 1925 aaKnown RBP17.06■□□□□ 0.32
PCDH17-201ENST00000377918 CASQ1P31415 396 aa17.06■□□□□ 0.32
PCDH17-201ENST00000377918 STMN4Q9H169 189 aaPredicted RBP17.06■□□□□ 0.32
PCDH17-201ENST00000377918 USH1CQ9Y6N9 552 aa17.06■□□□□ 0.32
PCDH17-201ENST00000377918 CCDC69A6NI79 296 aa17.05■□□□□ 0.32
PCDH17-201ENST00000377918 ME1P48163 572 aa17.05■□□□□ 0.32
PCDH17-201ENST00000377918 CCDC158Q5M9N0 1113 aa17.05■□□□□ 0.32
PCDH17-201ENST00000377918 MSH5O43196 834 aa17.05■□□□□ 0.32
PCDH17-201ENST00000377918 FKBP15Q5T1M5 1219 aa17.05■□□□□ 0.32
PCDH17-201ENST00000377918 EHBP1Q8NDI1 1231 aa17.05■□□□□ 0.32
PCDH17-201ENST00000377918 CRBNQ96SW2 442 aa17.05■□□□□ 0.32
PCDH17-201ENST00000377918 WDHD1O75717 1129 aaPredicted RBP17.05■□□□□ 0.32
PCDH17-201ENST00000377918 NFKBIBQ15653 356 aa17.05■□□□□ 0.32
PCDH17-201ENST00000377918 TSG101Q99816 390 aa17.05■□□□□ 0.32
PCDH17-201ENST00000377918 TTC12Q9H892 705 aaPredicted RBP17.05■□□□□ 0.32
PCDH17-201ENST00000377918 CNGA1P29973 690 aa17.05■□□□□ 0.32
PCDH17-201ENST00000377918 PIBF1Q8WXW3 757 aa17.05■□□□□ 0.32
PCDH17-201ENST00000377918 IVLP07476 585 aa17.05■□□□□ 0.32
PCDH17-201ENST00000377918 CTR9Q6PD62 1173 aa17.05■□□□□ 0.32
PCDH17-201ENST00000377918 CNTLNQ9NXG0 1405 aa17.04■□□□□ 0.32
PCDH17-201ENST00000377918 UQCRHLA0A096LP55 91 aa17.04■□□□□ 0.32
PCDH17-201ENST00000377918 GSTTP1A0A1W2PQM5 241 aa17.04■□□□□ 0.32
PCDH17-201ENST00000377918 SLU7O95391 586 aaKnown RBP17.04■□□□□ 0.32
PCDH17-201ENST00000377918 UQCRHP07919 91 aa17.04■□□□□ 0.32
PCDH17-201ENST00000377918 GTPBP4Q9BZE4 634 aaKnown RBP17.04■□□□□ 0.32
PCDH17-201ENST00000377918 NSRP1Q9H0G5 558 aaKnown RBP17.04■□□□□ 0.32
PCDH17-201ENST00000377918 CCDC172P0C7W6 258 aa17.03■□□□□ 0.32
PCDH17-201ENST00000377918 WDR66Q8TBY9 1149 aa17.03■□□□□ 0.32
PCDH17-201ENST00000377918 EIF5P55010 431 aaKnown RBP17.03■□□□□ 0.32
PCDH17-201ENST00000377918 ABCC8Q09428 1581 aa17.03■□□□□ 0.32
PCDH17-201ENST00000377918 LTV1Q96GA3 475 aaPredicted RBP17.03■□□□□ 0.32
PCDH17-201ENST00000377918 PSME1Q06323 249 aa17.03■□□□□ 0.32
PCDH17-201ENST00000377918 NOL3O60936 208 aaKnown RBP17.03■□□□□ 0.32
PCDH17-201ENST00000377918 ZSCAN31Q96LW9 406 aaPredicted RBP17.02■□□□□ 0.32
PCDH17-201ENST00000377918 USP47Q96K76 1375 aa17.02■□□□□ 0.32
PCDH17-201ENST00000377918 CEP135Q66GS9 1140 aa17.02■□□□□ 0.32
PCDH17-201ENST00000377918 PDS5BQ9NTI5 1447 aa17.02■□□□□ 0.32
PCDH17-201ENST00000377918 CCDC196A0A1B0GTZ2 297 aa17.02■□□□□ 0.32
PCDH17-201ENST00000377918 GSDMDP57764 484 aa17.02■□□□□ 0.32
PCDH17-201ENST00000377918 TTC21AQ8NDW8 1320 aa17.02■□□□□ 0.32
PCDH17-201ENST00000377918 KIF3CO14782 793 aa17.02■□□□□ 0.31
PCDH17-201ENST00000377918 FSD1Q9BTV5 496 aa17.02■□□□□ 0.31
PCDH17-201ENST00000377918 MKRN1Q9UHC7 482 aaKnown RBP17.02■□□□□ 0.31
PCDH17-201ENST00000377918 MATR3P43243 847 aaKnown RBP eCLIP17.01■□□□□ 0.31
PCDH17-201ENST00000377918 PTPN14Q15678 1187 aa17.01■□□□□ 0.31
PCDH17-201ENST00000377918 SWAP70Q9UH65 585 aa17.01■□□□□ 0.31
PCDH17-201ENST00000377918 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms