RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 FTSJ3Q8IY81 847 aaKnown RBP25.95■■□□□ 1.74
VSX1-202ENST00000376709 PMFBP1Q8TBY8 1022 aa25.95■■□□□ 1.74
VSX1-202ENST00000376709 PHACTR3Q96KR7 559 aa25.95■■□□□ 1.74
VSX1-202ENST00000376709 RGPD8O14715 1765 aaPredicted RBP25.92■■□□□ 1.74
VSX1-202ENST00000376709 SSH1Q8WYL5 1049 aa25.92■■□□□ 1.74
VSX1-202ENST00000376709 DZIP1LQ8IYY4 767 aaKnown RBP25.91■■□□□ 1.74
VSX1-202ENST00000376709 ZBTB47Q9UFB7 747 aaPredicted RBP25.91■■□□□ 1.74
VSX1-202ENST00000376709 OVOS2A0A0J9YW53 1432 aa25.91■■□□□ 1.74
VSX1-202ENST00000376709 OVOS2Q6IE36 1432 aa25.91■■□□□ 1.74
VSX1-202ENST00000376709 MVPQ14764 893 aaKnown RBP25.9■■□□□ 1.74
VSX1-202ENST00000376709 LAS1LQ9Y4W2 734 aaKnown RBP25.9■■□□□ 1.74
VSX1-202ENST00000376709 CALD1Q05682 793 aaKnown RBP25.89■■□□□ 1.74
VSX1-202ENST00000376709 SSH2Q76I76 1423 aa25.89■■□□□ 1.74
VSX1-202ENST00000376709 FAM161AQ3B820 660 aa25.89■■□□□ 1.73
VSX1-202ENST00000376709 SETD1BQ9UPS6 1966 aaKnown RBP25.88■■□□□ 1.73
VSX1-202ENST00000376709 NGDNQ8NEJ9 315 aaKnown RBP25.87■■□□□ 1.73
VSX1-202ENST00000376709 TRIM27P14373 513 aa25.86■■□□□ 1.73
VSX1-202ENST00000376709 PCDHB15Q9Y5E8 787 aa25.86■■□□□ 1.73
VSX1-202ENST00000376709 CHD2O14647 1828 aaKnown RBP25.86■■□□□ 1.73
VSX1-202ENST00000376709 THUMPD2Q9BTF0 503 aaKnown RBP25.85■■□□□ 1.73
VSX1-202ENST00000376709 KIF16BQ96L93 1317 aa25.85■■□□□ 1.73
VSX1-202ENST00000376709 ATF7IPQ6VMQ6 1270 aa25.85■■□□□ 1.73
VSX1-202ENST00000376709 DLG5Q8TDM6 1919 aa25.84■■□□□ 1.73
VSX1-202ENST00000376709 ANKARQ7Z5J8 1434 aa25.84■■□□□ 1.73
VSX1-202ENST00000376709 NALCNQ8IZF0 1738 aa25.84■■□□□ 1.73
VSX1-202ENST00000376709 LMOD3Q0VAK6 560 aa25.84■■□□□ 1.73
VSX1-202ENST00000376709 NOB1Q9ULX3 412 aaKnown RBP25.84■■□□□ 1.73
VSX1-202ENST00000376709 FMN2Q9NZ56 1722 aa25.84■■□□□ 1.73
VSX1-202ENST00000376709 C8orf34Q49A92 452 aa25.83■■□□□ 1.73
VSX1-202ENST00000376709 RBM33Q96EV2 1170 aaKnown RBP25.83■■□□□ 1.73
VSX1-202ENST00000376709 TTC21AQ8NDW8 1320 aa25.82■■□□□ 1.72
VSX1-202ENST00000376709 GNAI1P63096 354 aa25.82■■□□□ 1.72
VSX1-202ENST00000376709 ALDH1L2Q3SY69 923 aa25.82■■□□□ 1.72
VSX1-202ENST00000376709 EIF4A2Q14240 407 aaKnown RBP25.82■■□□□ 1.72
VSX1-202ENST00000376709 SOX12O15370 315 aa25.81■■□□□ 1.72
VSX1-202ENST00000376709 IPO8O15397 1037 aaKnown RBP25.81■■□□□ 1.72
VSX1-202ENST00000376709 ITPRIPQ8IWB1 547 aa25.81■■□□□ 1.72
VSX1-202ENST00000376709 RWDD1Q9H446 243 aaPredicted RBP25.81■■□□□ 1.72
VSX1-202ENST00000376709 IFT57Q9NWB7 429 aa25.81■■□□□ 1.72
VSX1-202ENST00000376709 USP31Q70CQ4 1352 aa25.81■■□□□ 1.72
VSX1-202ENST00000376709 ZNF428Q96B54 188 aa25.8■■□□□ 1.72
VSX1-202ENST00000376709 DDX19BQ9UMR2 479 aa25.8■■□□□ 1.72
VSX1-202ENST00000376709 NPHP4O75161 1426 aaPredicted RBP25.8■■□□□ 1.72
VSX1-202ENST00000376709 SULT6B1Q6IMI4 303 aa25.78■■□□□ 1.72
VSX1-202ENST00000376709 PEAK1Q9H792 1746 aa25.78■■□□□ 1.72
VSX1-202ENST00000376709 PIK3C2AO00443 1686 aa25.76■■□□□ 1.72
VSX1-202ENST00000376709 AEBP1Q8IUX7 1158 aa25.76■■□□□ 1.71
VSX1-202ENST00000376709 HSP90AB2PQ58FF8 381 aa25.76■■□□□ 1.71
VSX1-202ENST00000376709 MBIPQ9NS73 344 aa25.76■■□□□ 1.71
VSX1-202ENST00000376709 FAM83GA6ND36 823 aa25.75■■□□□ 1.71
VSX1-202ENST00000376709 ZNF853P0CG23 659 aa25.75■■□□□ 1.71
VSX1-202ENST00000376709 CFAP44Q96MT7 982 aa25.75■■□□□ 1.71
VSX1-202ENST00000376709 TMEM57Q8N5G2 664 aa25.74■■□□□ 1.71
VSX1-202ENST00000376709 DDRGK1Q96HY6 314 aa25.74■■□□□ 1.71
VSX1-202ENST00000376709 VIRMAQ69YN4 1812 aaKnown RBP25.74■■□□□ 1.71
VSX1-202ENST00000376709 VAMP4O75379 141 aa25.73■■□□□ 1.71
VSX1-202ENST00000376709 BRPF1P55201 1214 aaPredicted RBP25.72■■□□□ 1.71
VSX1-202ENST00000376709 TSPYL6Q8N831 410 aa25.72■■□□□ 1.71
VSX1-202ENST00000376709 MAP3K19Q56UN5 1328 aa25.72■■□□□ 1.71
VSX1-202ENST00000376709 DCTN1Q14203 1278 aa25.71■■□□□ 1.71
VSX1-202ENST00000376709 PDZRN3Q9UPQ7 1066 aa25.71■■□□□ 1.71
VSX1-202ENST00000376709 ADGRL3Q9HAR2 1447 aa25.71■■□□□ 1.71
VSX1-202ENST00000376709 ELL2O00472 640 aaPredicted RBP25.71■■□□□ 1.71
VSX1-202ENST00000376709 NBR1Q14596 966 aa25.71■■□□□ 1.71
VSX1-202ENST00000376709 RGPD1P0DJD0 1748 aa25.7■■□□□ 1.71
VSX1-202ENST00000376709 NLRP6P59044 892 aa25.69■■□□□ 1.7
VSX1-202ENST00000376709 NUTM2GQ5VZR2 741 aa25.69■■□□□ 1.7
VSX1-202ENST00000376709 TWISTNBQ3B726 338 aaPredicted RBP25.69■■□□□ 1.7
VSX1-202ENST00000376709 PHF8Q9UPP1 1060 aa25.69■■□□□ 1.7
VSX1-202ENST00000376709 FLT4P35916 1363 aa25.68■■□□□ 1.7
VSX1-202ENST00000376709 SBNO1A3KN83 1393 aa25.68■■□□□ 1.7
VSX1-202ENST00000376709 MRPL50Q8N5N7 158 aaKnown RBP25.67■■□□□ 1.7
VSX1-202ENST00000376709 HDAC1Q13547 482 aaPredicted RBP25.66■■□□□ 1.7
VSX1-202ENST00000376709 ZBTB40Q9NUA8 1239 aa25.66■■□□□ 1.7
VSX1-202ENST00000376709 C14orf37Q86TY3 774 aa25.66■■□□□ 1.7
VSX1-202ENST00000376709 AMPHP49418 695 aa25.65■■□□□ 1.7
VSX1-202ENST00000376709 C8orf58Q8NAV2 365 aa25.65■■□□□ 1.7
VSX1-202ENST00000376709 ARHGEF10O15013 1369 aa25.65■■□□□ 1.7
VSX1-202ENST00000376709 MARF1Q9Y4F3 1742 aaKnown RBP25.65■■□□□ 1.7
VSX1-202ENST00000376709 ARHGAP45Q92619 1136 aa25.65■■□□□ 1.7
VSX1-202ENST00000376709 ABTB2Q8N961 1025 aa25.64■■□□□ 1.7
VSX1-202ENST00000376709 NWD1Q149M9 1564 aa25.62■■□□□ 1.69
VSX1-202ENST00000376709 ESCO1Q5FWF5 840 aa25.62■■□□□ 1.69
VSX1-202ENST00000376709 MCM10Q7L590 875 aa25.62■■□□□ 1.69
VSX1-202ENST00000376709 CHMP4BQ9H444 224 aaKnown RBP25.6■■□□□ 1.69
VSX1-202ENST00000376709 USP54Q70EL1 1684 aa25.6■■□□□ 1.69
VSX1-202ENST00000376709 DAXXQ9UER7 740 aaPredicted RBP25.59■■□□□ 1.69
VSX1-202ENST00000376709 HAP1P54257 671 aaPredicted RBP25.57■■□□□ 1.68
VSX1-202ENST00000376709 CHL1O00533 1208 aa25.56■■□□□ 1.68
VSX1-202ENST00000376709 KDRP35968 1356 aa25.56■■□□□ 1.68
VSX1-202ENST00000376709 PSME1Q06323 249 aa25.56■■□□□ 1.68
VSX1-202ENST00000376709 PROSER2Q86WR7 435 aaPredicted RBP25.56■■□□□ 1.68
VSX1-202ENST00000376709 SMC5Q8IY18 1101 aa25.56■■□□□ 1.68
VSX1-202ENST00000376709 EYA1Q99502 592 aa25.56■■□□□ 1.68
VSX1-202ENST00000376709 ABCC4O15439 1325 aa25.55■■□□□ 1.68
VSX1-202ENST00000376709 IGSF1Q8N6C5 1336 aa25.55■■□□□ 1.68
VSX1-202ENST00000376709 API5Q9BZZ5 524 aaKnown RBP25.55■■□□□ 1.68
VSX1-202ENST00000376709 ZBTB7BO15156 539 aaPredicted RBP25.55■■□□□ 1.68
VSX1-202ENST00000376709 HOXC9P31274 260 aa25.55■■□□□ 1.68
VSX1-202ENST00000376709 RTF1Q92541 710 aaKnown RBP25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms