RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 ZBTB7CA1YPR0 619 aa30.66■■■□□ 2.5
HLA-C-202ENST00000376237 PEAK1Q9H792 1746 aa30.65■■■□□ 2.5
HLA-C-202ENST00000376237 LTN1O94822 1766 aa30.65■■■□□ 2.5
HLA-C-202ENST00000376237 ABCC6O95255 1503 aa30.64■■■□□ 2.5
HLA-C-202ENST00000376237 SPATA31A6Q5VVP1 1343 aa30.64■■■□□ 2.5
HLA-C-202ENST00000376237 WDR43Q15061 677 aaKnown RBP eCLIP30.64■■■□□ 2.5
HLA-C-202ENST00000376237 PRDM11Q9NQV5 511 aa30.64■■■□□ 2.5
HLA-C-202ENST00000376237 BLMP54132 1417 aaPredicted RBP30.64■■■□□ 2.5
HLA-C-202ENST00000376237 IL13P35225 146 aa30.61■■■□□ 2.49
HLA-C-202ENST00000376237 EIF4A2Q14240 407 aaKnown RBP30.6■■■□□ 2.49
HLA-C-202ENST00000376237 FAM9BQ8IZU0 186 aa30.6■■■□□ 2.49
HLA-C-202ENST00000376237 CHRNA2Q15822 529 aa30.57■■■□□ 2.49
HLA-C-202ENST00000376237 AXIN2Q9Y2T1 843 aa30.57■■■□□ 2.48
HLA-C-202ENST00000376237 NUTM2BA6NNL0 878 aaPredicted RBP30.56■■■□□ 2.48
HLA-C-202ENST00000376237 NUTM2EB1AL46 878 aaPredicted RBP30.56■■■□□ 2.48
HLA-C-202ENST00000376237 U2SURPO15042 1029 aaKnown RBP30.56■■■□□ 2.48
HLA-C-202ENST00000376237 NUTM2AQ8IVF1 878 aaPredicted RBP30.56■■■□□ 2.48
HLA-C-202ENST00000376237 FAM83GA6ND36 823 aa30.55■■■□□ 2.48
HLA-C-202ENST00000376237 ADAMTS8Q9UP79 889 aa30.55■■■□□ 2.48
HLA-C-202ENST00000376237 U2AF1L5P0DN76 240 aaPredicted RBP30.54■■■□□ 2.48
HLA-C-202ENST00000376237 U2AF1Q01081 240 aaKnown RBP eCLIP30.54■■■□□ 2.48
HLA-C-202ENST00000376237 COL18A1P39060 1754 aa30.54■■■□□ 2.48
HLA-C-202ENST00000376237 ADAMTS2O95450 1211 aa30.52■■■□□ 2.48
HLA-C-202ENST00000376237 ANKRD24Q8TF21 1146 aa30.52■■■□□ 2.48
HLA-C-202ENST00000376237 ERBB3P21860 1342 aa30.52■■■□□ 2.48
HLA-C-202ENST00000376237 LTV1Q96GA3 475 aaPredicted RBP30.51■■■□□ 2.47
HLA-C-202ENST00000376237 PNNQ9H307 717 aaKnown RBP30.5■■■□□ 2.47
HLA-C-202ENST00000376237 LMO7Q8WWI1 1683 aa30.49■■■□□ 2.47
HLA-C-202ENST00000376237 COL14A1Q05707 1796 aaKnown RBP30.49■■■□□ 2.47
HLA-C-202ENST00000376237 FCHSD2O94868 740 aa30.47■■■□□ 2.47
HLA-C-202ENST00000376237 EYA1Q99502 592 aa30.47■■■□□ 2.47
HLA-C-202ENST00000376237 CAMTA1Q9Y6Y1 1673 aa30.47■■■□□ 2.47
HLA-C-202ENST00000376237 IGSF1Q8N6C5 1336 aa30.47■■■□□ 2.47
HLA-C-202ENST00000376237 BTG4Q9NY30 223 aa30.45■■■□□ 2.47
HLA-C-202ENST00000376237 CSB-PGBD3P0DP91 1061 aa30.44■■■□□ 2.46
HLA-C-202ENST00000376237 EVA1CP58658 441 aa30.44■■■□□ 2.46
HLA-C-202ENST00000376237 COL5A2P05997 1499 aaPredicted RBP30.43■■■□□ 2.46
HLA-C-202ENST00000376237 WDR17Q8IZU2 1322 aa30.43■■■□□ 2.46
HLA-C-202ENST00000376237 RGPD1P0DJD0 1748 aa30.42■■■□□ 2.46
HLA-C-202ENST00000376237 NBPF6Q5VWK0 638 aa30.42■■■□□ 2.46
HLA-C-202ENST00000376237 SULT6B1Q6IMI4 303 aa30.42■■■□□ 2.46
HLA-C-202ENST00000376237 NBPF4Q96M43 638 aa30.42■■■□□ 2.46
HLA-C-202ENST00000376237 RGPD5Q99666 1765 aa30.41■■■□□ 2.46
HLA-C-202ENST00000376237 LRP6O75581 1613 aa30.41■■■□□ 2.46
HLA-C-202ENST00000376237 HMOX1P09601 288 aa30.41■■■□□ 2.46
HLA-C-202ENST00000376237 RSPH6AQ9H0K4 717 aa30.41■■■□□ 2.46
HLA-C-202ENST00000376237 KDRP35968 1356 aa30.41■■■□□ 2.46
HLA-C-202ENST00000376237 RUNDC1Q96C34 613 aa30.39■■■□□ 2.46
HLA-C-202ENST00000376237 NGLY1Q96IV0 654 aa30.39■■■□□ 2.46
HLA-C-202ENST00000376237 NLRP2Q9NX02 1062 aa30.39■■■□□ 2.46
HLA-C-202ENST00000376237 NEFMP07197 916 aa30.38■■■□□ 2.45
HLA-C-202ENST00000376237 MEX3CQ5U5Q3 659 aaKnown RBP30.38■■■□□ 2.45
HLA-C-202ENST00000376237 FAM208AQ9UK61 1670 aaKnown RBP30.38■■■□□ 2.45
HLA-C-202ENST00000376237 SLIT2O94813 1529 aa30.38■■■□□ 2.45
HLA-C-202ENST00000376237 C8orf37Q96NL8 207 aa30.37■■■□□ 2.45
HLA-C-202ENST00000376237 STRN4Q9NRL3 753 aa30.37■■■□□ 2.45
HLA-C-202ENST00000376237 NCAPD2Q15021 1401 aa30.37■■■□□ 2.45
HLA-C-202ENST00000376237 TOM1L2Q6ZVM7 507 aa30.37■■■□□ 2.45
HLA-C-202ENST00000376237 FNBP4Q8N3X1 1017 aaPredicted RBP30.37■■■□□ 2.45
HLA-C-202ENST00000376237 PLEKHF1Q96S99 279 aa30.37■■■□□ 2.45
HLA-C-202ENST00000376237 PRKAR2BP31323 418 aa30.36■■■□□ 2.45
HLA-C-202ENST00000376237 AEBP1Q8IUX7 1158 aa30.35■■■□□ 2.45
HLA-C-202ENST00000376237 CARD10Q9BWT7 1032 aa30.35■■■□□ 2.45
HLA-C-202ENST00000376237 CCDC146Q8IYE0 955 aa30.34■■■□□ 2.45
HLA-C-202ENST00000376237 MAPK8IP3Q9UPT6 1336 aa30.34■■■□□ 2.45
HLA-C-202ENST00000376237 LARP1Q6PKG0 1096 aaKnown RBP30.33■■■□□ 2.45
HLA-C-202ENST00000376237 PLCH1Q4KWH8 1693 aa30.33■■■□□ 2.45
HLA-C-202ENST00000376237 NWD2Q9ULI1 1742 aa30.33■■■□□ 2.45
HLA-C-202ENST00000376237 CRB1P82279 1406 aa30.33■■■□□ 2.45
HLA-C-202ENST00000376237 UNC5CLQ8IV45 518 aa30.32■■■□□ 2.44
HLA-C-202ENST00000376237 USHBP1Q8N6Y0 703 aa30.32■■■□□ 2.44
HLA-C-202ENST00000376237 HNRNPUQ00839 825 aaKnown RBP eCLIP30.29■■■□□ 2.44
HLA-C-202ENST00000376237 NGEFQ8N5V2 710 aa30.29■■■□□ 2.44
HLA-C-202ENST00000376237 PLEKHG2Q9H7P9 1386 aa30.28■■■□□ 2.44
HLA-C-202ENST00000376237 APAF1O14727 1248 aa30.27■■■□□ 2.44
HLA-C-202ENST00000376237 TCP11L2Q8N4U5 519 aa30.27■■■□□ 2.44
HLA-C-202ENST00000376237 YTHDC1Q96MU7 727 aaKnown RBP30.27■■■□□ 2.44
HLA-C-202ENST00000376237 RGPD2P0DJD1 1756 aa30.27■■■□□ 2.44
HLA-C-202ENST00000376237 RAPGEF4Q8WZA2 1011 aa30.27■■■□□ 2.44
HLA-C-202ENST00000376237 NRAPQ86VF7 1730 aa30.26■■■□□ 2.43
HLA-C-202ENST00000376237 BCL9LQ86UU0 1499 aa30.26■■■□□ 2.43
HLA-C-202ENST00000376237 NCBP3Q53F19 620 aaKnown RBP30.26■■■□□ 2.43
HLA-C-202ENST00000376237 USP21Q9UK80 565 aa30.26■■■□□ 2.43
HLA-C-202ENST00000376237 PHACTR3Q96KR7 559 aa30.25■■■□□ 2.43
HLA-C-202ENST00000376237 TATP17735 454 aaPredicted RBP30.22■■■□□ 2.43
HLA-C-202ENST00000376237 VPS72Q15906 364 aa30.22■■■□□ 2.43
HLA-C-202ENST00000376237 THRAP3Q9Y2W1 955 aaKnown RBP30.22■■■□□ 2.43
HLA-C-202ENST00000376237 AFF2P51816 1311 aa30.22■■■□□ 2.43
HLA-C-202ENST00000376237 AMOTQ4VCS5 1084 aa30.22■■■□□ 2.43
HLA-C-202ENST00000376237 TMPOP42166 694 aaKnown RBP30.21■■■□□ 2.43
HLA-C-202ENST00000376237 SPATA31A1Q5TZJ5 1347 aa30.2■■■□□ 2.43
HLA-C-202ENST00000376237 SPATA31A5Q5VU36 1347 aa30.2■■■□□ 2.43
HLA-C-202ENST00000376237 SPATA31A7Q8IWB4 1347 aa30.2■■■□□ 2.43
HLA-C-202ENST00000376237 NFE2L2Q16236 605 aa30.2■■■□□ 2.42
HLA-C-202ENST00000376237 PLEKHO1Q53GL0 409 aaPredicted RBP30.2■■■□□ 2.42
HLA-C-202ENST00000376237 GAS2L2Q8NHY3 880 aa30.2■■■□□ 2.42
HLA-C-202ENST00000376237 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.2■■■□□ 2.42
HLA-C-202ENST00000376237 IL2RBP14784 551 aa30.19■■■□□ 2.42
HLA-C-202ENST00000376237 USP35Q9P2H5 1018 aa30.19■■■□□ 2.42
HLA-C-202ENST00000376237 CCDC9Q9Y3X0 531 aaKnown RBP30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms