RNA–Protein interactions for RNA: ENST00000375642.6

C6orf48-207, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-207ENST00000375642 KNSTRNQ9Y448 316 aa23.96■■□□□ 1.43
C6orf48-207ENST00000375642 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.96■■□□□ 1.43
C6orf48-207ENST00000375642 AXIN2Q9Y2T1 843 aa23.94■■□□□ 1.42
C6orf48-207ENST00000375642 CAMTA1Q9Y6Y1 1673 aa23.94■■□□□ 1.42
C6orf48-207ENST00000375642 SPATA31A5Q5VU36 1347 aa23.91■■□□□ 1.42
C6orf48-207ENST00000375642 SPATA31A7Q8IWB4 1347 aa23.91■■□□□ 1.42
C6orf48-207ENST00000375642 FBLN1P23142 703 aa23.91■■□□□ 1.42
C6orf48-207ENST00000375642 LMO7Q8WWI1 1683 aa23.91■■□□□ 1.42
C6orf48-207ENST00000375642 NRAPQ86VF7 1730 aa23.9■■□□□ 1.42
C6orf48-207ENST00000375642 LARP1Q6PKG0 1096 aaKnown RBP23.9■■□□□ 1.42
C6orf48-207ENST00000375642 KIF20BQ96Q89 1820 aa23.89■■□□□ 1.42
C6orf48-207ENST00000375642 COL5A2P05997 1499 aaPredicted RBP23.89■■□□□ 1.42
C6orf48-207ENST00000375642 GLI3P10071 1580 aa23.89■■□□□ 1.41
C6orf48-207ENST00000375642 MAP3K19Q56UN5 1328 aa23.88■■□□□ 1.41
C6orf48-207ENST00000375642 DEFB132Q7Z7B7 95 aa23.88■■□□□ 1.41
C6orf48-207ENST00000375642 IP6K1Q92551 441 aa23.88■■□□□ 1.41
C6orf48-207ENST00000375642 NSD2O96028 1365 aa23.88■■□□□ 1.41
C6orf48-207ENST00000375642 LRP5O75197 1615 aa23.88■■□□□ 1.41
C6orf48-207ENST00000375642 SPATA31A1Q5TZJ5 1347 aa23.87■■□□□ 1.41
C6orf48-207ENST00000375642 PER1O15534 1290 aaPredicted RBP23.87■■□□□ 1.41
C6orf48-207ENST00000375642 AMPHP49418 695 aa23.87■■□□□ 1.41
C6orf48-207ENST00000375642 RRS1Q15050 365 aaKnown RBP23.87■■□□□ 1.41
C6orf48-207ENST00000375642 COL18A1P39060 1754 aa23.86■■□□□ 1.41
C6orf48-207ENST00000375642 ABCC6O95255 1503 aa23.86■■□□□ 1.41
C6orf48-207ENST00000375642 CSB-PGBD3P0DP91 1061 aa23.86■■□□□ 1.41
C6orf48-207ENST00000375642 USP35Q9P2H5 1018 aa23.86■■□□□ 1.41
C6orf48-207ENST00000375642 ONECUT3O60422 494 aaPredicted RBP23.85■■□□□ 1.41
C6orf48-207ENST00000375642 FAM98CQ17RN3 349 aaKnown RBP23.85■■□□□ 1.41
C6orf48-207ENST00000375642 AMER1Q5JTC6 1135 aaPredicted RBP23.85■■□□□ 1.41
C6orf48-207ENST00000375642 TOM1L2Q6ZVM7 507 aa23.85■■□□□ 1.41
C6orf48-207ENST00000375642 WDR17Q8IZU2 1322 aa23.84■■□□□ 1.41
C6orf48-207ENST00000375642 MORC1Q86VD1 984 aa23.84■■□□□ 1.41
C6orf48-207ENST00000375642 HOXC9P31274 260 aa23.83■■□□□ 1.41
C6orf48-207ENST00000375642 TNNT2P45379 298 aaPredicted RBP23.83■■□□□ 1.41
C6orf48-207ENST00000375642 SEPT12Q8IYM1 358 aa23.83■■□□□ 1.41
C6orf48-207ENST00000375642 CRB1P82279 1406 aa23.83■■□□□ 1.4
C6orf48-207ENST00000375642 A0A0G2JS52 829 aa23.82■■□□□ 1.4
C6orf48-207ENST00000375642 MYT1Q01538 1121 aa23.82■■□□□ 1.4
C6orf48-207ENST00000375642 TCP11L2Q8N4U5 519 aa23.82■■□□□ 1.4
C6orf48-207ENST00000375642 ANKRD24Q8TF21 1146 aa23.82■■□□□ 1.4
C6orf48-207ENST00000375642 LTN1O94822 1766 aa23.81■■□□□ 1.4
C6orf48-207ENST00000375642 THRAP3Q9Y2W1 955 aaKnown RBP23.81■■□□□ 1.4
C6orf48-207ENST00000375642 ERBB3P21860 1342 aa23.81■■□□□ 1.4
C6orf48-207ENST00000375642 RTL1A6NKG5 1358 aa23.8■■□□□ 1.4
C6orf48-207ENST00000375642 BRWD3Q6RI45 1802 aa23.8■■□□□ 1.4
C6orf48-207ENST00000375642 PPM1GO15355 546 aaPredicted RBP23.79■■□□□ 1.4
C6orf48-207ENST00000375642 BARGINQ6ZT62 677 aa23.79■■□□□ 1.4
C6orf48-207ENST00000375642 LTV1Q96GA3 475 aaPredicted RBP23.79■■□□□ 1.4
C6orf48-207ENST00000375642 CARD10Q9BWT7 1032 aa23.79■■□□□ 1.4
C6orf48-207ENST00000375642 EMILIN1Q9Y6C2 1016 aa23.79■■□□□ 1.4
C6orf48-207ENST00000375642 KIF24Q5T7B8 1368 aa23.78■■□□□ 1.4
C6orf48-207ENST00000375642 CC2D1BQ5T0F9 858 aaKnown RBP23.78■■□□□ 1.4
C6orf48-207ENST00000375642 NLRP2Q9NX02 1062 aa23.78■■□□□ 1.4
C6orf48-207ENST00000375642 FLT4P35916 1363 aa23.78■■□□□ 1.4
C6orf48-207ENST00000375642 BAG6P46379 1132 aa23.77■■□□□ 1.4
C6orf48-207ENST00000375642 KRT27Q7Z3Y8 459 aa23.77■■□□□ 1.4
C6orf48-207ENST00000375642 POLKQ9UBT6 870 aa23.77■■□□□ 1.4
C6orf48-207ENST00000375642 HSP90AB2PQ58FF8 381 aa23.76■■□□□ 1.39
C6orf48-207ENST00000375642 NPC1L1Q9UHC9 1359 aa23.76■■□□□ 1.39
C6orf48-207ENST00000375642 RGPD5Q99666 1765 aa23.75■■□□□ 1.39
C6orf48-207ENST00000375642 PSDA5PKW4 1024 aaPredicted RBP23.75■■□□□ 1.39
C6orf48-207ENST00000375642 CNGB1Q14028 1251 aaPredicted RBP23.75■■□□□ 1.39
C6orf48-207ENST00000375642 ANKRD26Q9UPS8 1709 aa23.74■■□□□ 1.39
C6orf48-207ENST00000375642 INSRP06213 1382 aa23.74■■□□□ 1.39
C6orf48-207ENST00000375642 SMG6Q86US8 1419 aaKnown RBP23.71■■□□□ 1.39
C6orf48-207ENST00000375642 CDCA7Q9BWT1 371 aaPredicted RBP23.71■■□□□ 1.39
C6orf48-207ENST00000375642 DDX10Q13206 875 aaKnown RBP23.7■■□□□ 1.38
C6orf48-207ENST00000375642 PEAK1Q9H792 1746 aa23.68■■□□□ 1.38
C6orf48-207ENST00000375642 THSD7AQ9UPZ6 1657 aa23.67■■□□□ 1.38
C6orf48-207ENST00000375642 PDE3BQ13370 1112 aa23.67■■□□□ 1.38
C6orf48-207ENST00000375642 MAP2P11137 1827 aaKnown RBP23.66■■□□□ 1.38
C6orf48-207ENST00000375642 NBPF6Q5VWK0 638 aa23.66■■□□□ 1.38
C6orf48-207ENST00000375642 NBPF4Q96M43 638 aa23.66■■□□□ 1.38
C6orf48-207ENST00000375642 DDB1Q16531 1140 aa23.65■■□□□ 1.38
C6orf48-207ENST00000375642 ZNF316A6NFI3 1004 aaPredicted RBP23.64■■□□□ 1.37
C6orf48-207ENST00000375642 IL2RBP14784 551 aa23.64■■□□□ 1.37
C6orf48-207ENST00000375642 MTHFSP49914 203 aa23.63■■□□□ 1.37
C6orf48-207ENST00000375642 DISP2A7MBM2 1401 aa23.62■■□□□ 1.37
C6orf48-207ENST00000375642 EXOC5O00471 708 aa23.62■■□□□ 1.37
C6orf48-207ENST00000375642 EIF4A2Q14240 407 aaKnown RBP23.62■■□□□ 1.37
C6orf48-207ENST00000375642 RGPD1P0DJD0 1748 aa23.62■■□□□ 1.37
C6orf48-207ENST00000375642 FAM208AQ9UK61 1670 aaKnown RBP23.61■■□□□ 1.37
C6orf48-207ENST00000375642 FAM182BQ5T319 152 aa23.61■■□□□ 1.37
C6orf48-207ENST00000375642 USHBP1Q8N6Y0 703 aa23.61■■□□□ 1.37
C6orf48-207ENST00000375642 EN1Q05925 392 aaPredicted RBP23.6■■□□□ 1.37
C6orf48-207ENST00000375642 R3HDM1Q15032 1099 aaKnown RBP23.59■■□□□ 1.37
C6orf48-207ENST00000375642 FAM196AQ6ZSG2 479 aa23.58■■□□□ 1.37
C6orf48-207ENST00000375642 RAPGEF4Q8WZA2 1011 aa23.58■■□□□ 1.37
C6orf48-207ENST00000375642 EYA1Q99502 592 aa23.58■■□□□ 1.37
C6orf48-207ENST00000375642 PARP4Q9UKK3 1724 aaKnown RBP23.58■■□□□ 1.37
C6orf48-207ENST00000375642 TATP17735 454 aaPredicted RBP23.54■■□□□ 1.36
C6orf48-207ENST00000375642 PPP2R1AP30153 589 aa23.54■■□□□ 1.36
C6orf48-207ENST00000375642 MARCH10Q8NA82 808 aaPredicted RBP23.54■■□□□ 1.36
C6orf48-207ENST00000375642 RGPD2P0DJD1 1756 aa23.53■■□□□ 1.36
C6orf48-207ENST00000375642 TNS2Q63HR2 1409 aa23.53■■□□□ 1.36
C6orf48-207ENST00000375642 LRRC37A3O60309 1634 aa23.53■■□□□ 1.36
C6orf48-207ENST00000375642 IL13P35225 146 aa23.53■■□□□ 1.36
C6orf48-207ENST00000375642 WNK3Q9BYP7 1800 aa23.53■■□□□ 1.36
C6orf48-207ENST00000375642 MEGF6O75095 1541 aa23.51■■□□□ 1.35
C6orf48-207ENST00000375642 DIAPH1O60610 1272 aaKnown RBP23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms