RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 NGEFQ8N5V2 710 aa15.16■□□□□ 0.02
CSGALNACT2-201ENST00000374466 IGSF1Q8N6C5 1336 aa15.15■□□□□ 0.02
CSGALNACT2-201ENST00000374466 BCL9LQ86UU0 1499 aa15.15■□□□□ 0.02
CSGALNACT2-201ENST00000374466 ABTB2Q8N961 1025 aa15.15■□□□□ 0.02
CSGALNACT2-201ENST00000374466 GLI3P10071 1580 aa15.14■□□□□ 0.01
CSGALNACT2-201ENST00000374466 MORC1Q86VD1 984 aa15.14■□□□□ 0.01
CSGALNACT2-201ENST00000374466 MAP3K19Q56UN5 1328 aa15.14■□□□□ 0.01
CSGALNACT2-201ENST00000374466 ANP32CO43423 234 aa15.13■□□□□ 0.01
CSGALNACT2-201ENST00000374466 IL13P35225 146 aa15.13■□□□□ 0.01
CSGALNACT2-201ENST00000374466 DIEXFQ68CQ4 756 aaKnown RBP15.13■□□□□ 0.01
CSGALNACT2-201ENST00000374466 SCN11AQ9UI33 1791 aa15.13■□□□□ 0.01
CSGALNACT2-201ENST00000374466 CRB1P82279 1406 aa15.13■□□□□ 0.01
CSGALNACT2-201ENST00000374466 HOXC9P31274 260 aa15.13■□□□□ 0.01
CSGALNACT2-201ENST00000374466 SENP3Q9H4L4 574 aaPredicted RBP15.12■□□□□ 0.01
CSGALNACT2-201ENST00000374466 THRAP3Q9Y2W1 955 aaKnown RBP15.12■□□□□ 0.01
CSGALNACT2-201ENST00000374466 NLRP6P59044 892 aa15.11■□□□□ 0.01
CSGALNACT2-201ENST00000374466 DLG5Q8TDM6 1919 aa15.1■□□□□ 0.01
CSGALNACT2-201ENST00000374466 GGNBP2Q9H3C7 697 aa15.1■□□□□ 0.01
CSGALNACT2-201ENST00000374466 KIAA0232Q92628 1395 aa15.1■□□□□ 0.01
CSGALNACT2-201ENST00000374466 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.09■□□□□ 0.013e-6■■■■□ 21.1
CSGALNACT2-201ENST00000374466 ERBB3P21860 1342 aa15.09■□□□□ 0.01
CSGALNACT2-201ENST00000374466 HSPA1LP34931 641 aa15.09■□□□□ 0.01
CSGALNACT2-201ENST00000374466 ONECUT3O60422 494 aaPredicted RBP15.09■□□□□ 0.01
CSGALNACT2-201ENST00000374466 WDR17Q8IZU2 1322 aa15.08■□□□□ 0.01
CSGALNACT2-201ENST00000374466 PNISRQ8TF01 805 aaKnown RBP15.08■□□□□ 0.01
CSGALNACT2-201ENST00000374466 UBR2Q8IWV8 1755 aa15.08■□□□□ 0.01
CSGALNACT2-201ENST00000374466 BARGINQ6ZT62 677 aa15.07■□□□□ 0
CSGALNACT2-201ENST00000374466 PHF23Q9BUL5 403 aaPredicted RBP15.07■□□□□ 0
CSGALNACT2-201ENST00000374466 ZRANB1Q9UGI0 708 aa15.07■□□□□ 0
CSGALNACT2-201ENST00000374466 KDM3BQ7LBC6 1761 aa15.07■□□□□ 0
CSGALNACT2-201ENST00000374466 NHSQ6T4R5 1651 aa15.07■□□□□ 0
CSGALNACT2-201ENST00000374466 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.06■□□□□ 0
CSGALNACT2-201ENST00000374466 CFAP53Q96M91 514 aa15.06■□□□□ 0
CSGALNACT2-201ENST00000374466 CDCA7Q9BWT1 371 aaPredicted RBP15.06■□□□□ 0
CSGALNACT2-201ENST00000374466 RREB1Q92766 1687 aa15.05■□□□□ 0
CSGALNACT2-201ENST00000374466 PLEKHF1Q96S99 279 aa15.05■□□□□ 0
CSGALNACT2-201ENST00000374466 CARD10Q9BWT7 1032 aa15.05■□□□□ 0
CSGALNACT2-201ENST00000374466 NUTM2FA1L443 756 aa15.05■□□□□ -0
CSGALNACT2-201ENST00000374466 VPS72Q15906 364 aa15.05■□□□□ -0
CSGALNACT2-201ENST00000374466 CCDC27Q2M243 656 aa15.05■□□□□ -0
CSGALNACT2-201ENST00000374466 DDX17Q92841 729 aaKnown RBP15.05■□□□□ -0
CSGALNACT2-201ENST00000374466 TOGARAM1Q9Y4F4 1720 aa15.05■□□□□ -0
CSGALNACT2-201ENST00000374466 PNNQ9H307 717 aaKnown RBP15.04■□□□□ -0
CSGALNACT2-201ENST00000374466 TNS2Q63HR2 1409 aa15.04■□□□□ -0
CSGALNACT2-201ENST00000374466 MTHFSP49914 203 aa15.04■□□□□ -0
CSGALNACT2-201ENST00000374466 SBF2Q86WG5 1849 aa15.04■□□□□ -0
CSGALNACT2-201ENST00000374466 FCHSD2O94868 740 aa15.04■□□□□ -0
CSGALNACT2-201ENST00000374466 EIF4A2Q14240 407 aaKnown RBP15.03■□□□□ -0
CSGALNACT2-201ENST00000374466 SPATA31A5Q5VU36 1347 aa15.02■□□□□ -0
CSGALNACT2-201ENST00000374466 SPATA31A7Q8IWB4 1347 aa15.02■□□□□ -0
CSGALNACT2-201ENST00000374466 FAM83GA6ND36 823 aa15.02□□□□□ -0.01
CSGALNACT2-201ENST00000374466 HTATSF1O43719 755 aaKnown RBP15.02□□□□□ -0.01
CSGALNACT2-201ENST00000374466 CC2D1BQ5T0F9 858 aaKnown RBP15.01□□□□□ -0.01
CSGALNACT2-201ENST00000374466 RSPH6AQ9H0K4 717 aa15.01□□□□□ -0.01
CSGALNACT2-201ENST00000374466 DIAPH1O60610 1272 aaKnown RBP15.01□□□□□ -0.01
CSGALNACT2-201ENST00000374466 EMILIN1Q9Y6C2 1016 aa15□□□□□ -0.01
CSGALNACT2-201ENST00000374466 SPATA31A1Q5TZJ5 1347 aa15□□□□□ -0.01
CSGALNACT2-201ENST00000374466 NKX1-1Q15270 411 aaPredicted RBP14.99□□□□□ -0.01
CSGALNACT2-201ENST00000374466 UNC5CLQ8IV45 518 aa14.99□□□□□ -0.01
CSGALNACT2-201ENST00000374466 QSER1Q2KHR3 1735 aa14.98□□□□□ -0.01
CSGALNACT2-201ENST00000374466 MEGF6O75095 1541 aa14.98□□□□□ -0.01
CSGALNACT2-201ENST00000374466 LAMB4A4D0S4 1761 aa14.98□□□□□ -0.01
CSGALNACT2-201ENST00000374466 AXIN2Q9Y2T1 843 aa14.98□□□□□ -0.01
CSGALNACT2-201ENST00000374466 ZNF521Q96K83 1311 aa14.98□□□□□ -0.01
CSGALNACT2-201ENST00000374466 PAK3O75914 559 aaPredicted RBP14.98□□□□□ -0.01
CSGALNACT2-201ENST00000374466 NUDCQ9Y266 331 aa14.98□□□□□ -0.01
CSGALNACT2-201ENST00000374466 LY75O60449 1722 aa14.98□□□□□ -0.01
CSGALNACT2-201ENST00000374466 BRWD3Q6RI45 1802 aa14.98□□□□□ -0.01
CSGALNACT2-201ENST00000374466 BABAM1Q9NWV8 329 aa14.97□□□□□ -0.01
CSGALNACT2-201ENST00000374466 ITGB4P16144 1822 aa14.97□□□□□ -0.01
CSGALNACT2-201ENST00000374466 CEMIPQ8WUJ3 1361 aa14.96□□□□□ -0.01
CSGALNACT2-201ENST00000374466 TNS1Q9HBL0 1735 aaKnown RBP14.96□□□□□ -0.01
CSGALNACT2-201ENST00000374466 XPCQ01831 940 aaPredicted RBP14.96□□□□□ -0.01
CSGALNACT2-201ENST00000374466 PIP4K2BP78356 416 aa14.96□□□□□ -0.01
CSGALNACT2-201ENST00000374466 ANKRD24Q8TF21 1146 aa14.96□□□□□ -0.01
CSGALNACT2-201ENST00000374466 IL16Q14005 1332 aa14.95□□□□□ -0.02
CSGALNACT2-201ENST00000374466 N4BP2Q86UW6 1770 aaPredicted RBP14.95□□□□□ -0.02
CSGALNACT2-201ENST00000374466 AMOTQ4VCS5 1084 aa14.94□□□□□ -0.02
CSGALNACT2-201ENST00000374466 HSP90AB2PQ58FF8 381 aa14.94□□□□□ -0.02
CSGALNACT2-201ENST00000374466 MIER1Q8N108 512 aa14.94□□□□□ -0.02
CSGALNACT2-201ENST00000374466 EYA1Q99502 592 aa14.94□□□□□ -0.02
CSGALNACT2-201ENST00000374466 DOT1LQ8TEK3 1739 aa14.94□□□□□ -0.02
CSGALNACT2-201ENST00000374466 C5P01031 1676 aa14.94□□□□□ -0.02
CSGALNACT2-201ENST00000374466 RRS1Q15050 365 aaKnown RBP14.93□□□□□ -0.02
CSGALNACT2-201ENST00000374466 AMPHP49418 695 aa14.93□□□□□ -0.02
CSGALNACT2-201ENST00000374466 POLR3GLQ9BT43 218 aa14.93□□□□□ -0.02
CSGALNACT2-201ENST00000374466 ZNF772Q68DY9 489 aaPredicted RBP14.93□□□□□ -0.02
CSGALNACT2-201ENST00000374466 RUNDC1Q96C34 613 aa14.92□□□□□ -0.02
CSGALNACT2-201ENST00000374466 PRDM11Q9NQV5 511 aa14.92□□□□□ -0.02
CSGALNACT2-201ENST00000374466 COL5A3P25940 1745 aaPredicted RBP14.92□□□□□ -0.02
CSGALNACT2-201ENST00000374466 SOS1Q07889 1333 aaPredicted RBP14.91□□□□□ -0.02
CSGALNACT2-201ENST00000374466 COL24A1Q17RW2 1714 aa14.9□□□□□ -0.02
CSGALNACT2-201ENST00000374466 NBPF6Q5VWK0 638 aa14.9□□□□□ -0.02
CSGALNACT2-201ENST00000374466 NBPF4Q96M43 638 aa14.9□□□□□ -0.02
CSGALNACT2-201ENST00000374466 CCDC184Q52MB2 194 aa14.89□□□□□ -0.03
CSGALNACT2-201ENST00000374466 TRPC5Q9UL62 973 aaPredicted RBP14.89□□□□□ -0.03
CSGALNACT2-201ENST00000374466 TCP11L2Q8N4U5 519 aa14.89□□□□□ -0.03
CSGALNACT2-201ENST00000374466 CABLES1Q8TDN4 633 aa14.89□□□□□ -0.03
CSGALNACT2-201ENST00000374466 IBTKQ9P2D0 1353 aaPredicted RBP14.89□□□□□ -0.03
CSGALNACT2-201ENST00000374466 TRMT2AQ8IZ69 625 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms