RNA–Protein interactions for RNA: ENST00000373020.8

TSPAN6-201, Transcript of tetraspanin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN6, Length 2,206 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-201ENST00000373020 ADAMTS13Q76LX8 1427 aa15.94■□□□□ 0.14
TSPAN6-201ENST00000373020 ZNF853P0CG23 659 aa15.94■□□□□ 0.14
TSPAN6-201ENST00000373020 TXNDC2Q86VQ3 553 aa15.94■□□□□ 0.14
TSPAN6-201ENST00000373020 CCDC61Q9Y6R9 512 aa15.94■□□□□ 0.14
TSPAN6-201ENST00000373020 IFT57Q9NWB7 429 aa15.93■□□□□ 0.14
TSPAN6-201ENST00000373020 NALCNQ8IZF0 1738 aa15.93■□□□□ 0.14
TSPAN6-201ENST00000373020 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.93■□□□□ 0.14
TSPAN6-201ENST00000373020 PRR36Q9H6K5 1346 aa15.92■□□□□ 0.14
TSPAN6-201ENST00000373020 HMOX1P09601 288 aa15.92■□□□□ 0.14
TSPAN6-201ENST00000373020 HDGFP51858 240 aaKnown RBP15.92■□□□□ 0.14
TSPAN6-201ENST00000373020 BECN1Q14457 450 aa15.92■□□□□ 0.14
TSPAN6-201ENST00000373020 UPF2Q9HAU5 1272 aaKnown RBP15.92■□□□□ 0.14
TSPAN6-201ENST00000373020 ZRANB1Q9UGI0 708 aa15.91■□□□□ 0.14
TSPAN6-201ENST00000373020 ROBO2Q9HCK4 1378 aa15.91■□□□□ 0.14
TSPAN6-201ENST00000373020 GNAI1P63096 354 aa15.91■□□□□ 0.14
TSPAN6-201ENST00000373020 ARHGAP45Q92619 1136 aa15.91■□□□□ 0.14
TSPAN6-201ENST00000373020 COG3Q96JB2 828 aa15.91■□□□□ 0.14
TSPAN6-201ENST00000373020 VAMP4O75379 141 aa15.9■□□□□ 0.14
TSPAN6-201ENST00000373020 OVOS2A0A0J9YW53 1432 aa15.9■□□□□ 0.14
TSPAN6-201ENST00000373020 OVOS2Q6IE36 1432 aa15.9■□□□□ 0.14
TSPAN6-201ENST00000373020 MRPL50Q8N5N7 158 aaKnown RBP15.9■□□□□ 0.14
TSPAN6-201ENST00000373020 ZNF692Q9BU19 519 aaPredicted RBP15.9■□□□□ 0.14
TSPAN6-201ENST00000373020 NCKAP5LQ9HCH0 1330 aa15.89■□□□□ 0.13
TSPAN6-201ENST00000373020 RGPD1P0DJD0 1748 aa15.89■□□□□ 0.13
TSPAN6-201ENST00000373020 LMOD3Q0VAK6 560 aa15.89■□□□□ 0.13
TSPAN6-201ENST00000373020 THUMPD2Q9BTF0 503 aaKnown RBP15.88■□□□□ 0.13
TSPAN6-201ENST00000373020 ESF1Q9H501 851 aaKnown RBP15.88■□□□□ 0.13
TSPAN6-201ENST00000373020 PLEKHG1Q9ULL1 1385 aa15.88■□□□□ 0.13
TSPAN6-201ENST00000373020 ABCC4O15439 1325 aa15.88■□□□□ 0.13
TSPAN6-201ENST00000373020 MBIPQ9NS73 344 aa15.88■□□□□ 0.13
TSPAN6-201ENST00000373020 NUCB1Q02818 461 aa15.87■□□□□ 0.13
TSPAN6-201ENST00000373020 GSE1Q14687 1217 aa15.87■□□□□ 0.13
TSPAN6-201ENST00000373020 FRAT2O75474 233 aaPredicted RBP15.87■□□□□ 0.13
TSPAN6-201ENST00000373020 TSPYL6Q8N831 410 aa15.87■□□□□ 0.13
TSPAN6-201ENST00000373020 CFAP44Q96MT7 982 aa15.87■□□□□ 0.13
TSPAN6-201ENST00000373020 ANTXR1Q9H6X2 564 aa15.87■□□□□ 0.13
TSPAN6-201ENST00000373020 PEAK1Q9H792 1746 aa15.87■□□□□ 0.13
TSPAN6-201ENST00000373020 RRS1Q15050 365 aaKnown RBP15.86■□□□□ 0.13
TSPAN6-201ENST00000373020 ZBTB7BO15156 539 aaPredicted RBP15.86■□□□□ 0.13
TSPAN6-201ENST00000373020 TBC1D2Q9BYX2 928 aa15.85■□□□□ 0.13
TSPAN6-201ENST00000373020 CHMP4BQ9H444 224 aaKnown RBP15.85■□□□□ 0.13
TSPAN6-201ENST00000373020 USP6P35125 1406 aa15.85■□□□□ 0.13
TSPAN6-201ENST00000373020 SSH2Q76I76 1423 aa15.84■□□□□ 0.13
TSPAN6-201ENST00000373020 TTC21BQ7Z4L5 1316 aa15.84■□□□□ 0.13
TSPAN6-201ENST00000373020 USP31Q70CQ4 1352 aa15.84■□□□□ 0.13
TSPAN6-201ENST00000373020 PLEKHG3A1L390 1219 aa15.84■□□□□ 0.13
TSPAN6-201ENST00000373020 KIF24Q5T7B8 1368 aa15.83■□□□□ 0.13
TSPAN6-201ENST00000373020 TWISTNBQ3B726 338 aaPredicted RBP15.83■□□□□ 0.12
TSPAN6-201ENST00000373020 SLIT1O75093 1534 aa15.82■□□□□ 0.12
TSPAN6-201ENST00000373020 PTPRUQ92729 1446 aa15.82■□□□□ 0.12
TSPAN6-201ENST00000373020 CHD1LQ86WJ1 897 aa15.82■□□□□ 0.12
TSPAN6-201ENST00000373020 C22orf23Q9BZE7 217 aa15.82■□□□□ 0.12
TSPAN6-201ENST00000373020 ARHGAP23Q9P227 1491 aa15.82■□□□□ 0.12
TSPAN6-201ENST00000373020 FMN2Q9NZ56 1722 aa15.82■□□□□ 0.12
TSPAN6-201ENST00000373020 EIF4A2Q14240 407 aaKnown RBP15.82■□□□□ 0.12
TSPAN6-201ENST00000373020 RIMS1Q86UR5 1692 aaKnown RBP15.81■□□□□ 0.12
TSPAN6-201ENST00000373020 C8orf58Q8NAV2 365 aa15.81■□□□□ 0.12
TSPAN6-201ENST00000373020 GCC1Q96CN9 775 aa15.81■□□□□ 0.12
TSPAN6-201ENST00000373020 ACEP12821 1306 aa15.8■□□□□ 0.12
TSPAN6-201ENST00000373020 LTKP29376 864 aa15.8■□□□□ 0.12
TSPAN6-201ENST00000373020 API5Q9BZZ5 524 aaKnown RBP15.8■□□□□ 0.12
TSPAN6-201ENST00000373020 FAM83GA6ND36 823 aa15.79■□□□□ 0.12
TSPAN6-201ENST00000373020 MFAP1P55081 439 aaKnown RBP15.79■□□□□ 0.12
TSPAN6-201ENST00000373020 BMP2KLQ5H9B9 411 aa15.79■□□□□ 0.12
TSPAN6-201ENST00000373020 LNPKQ9C0E8 428 aa15.79■□□□□ 0.12
TSPAN6-201ENST00000373020 AEBP1Q8IUX7 1158 aa15.79■□□□□ 0.12
TSPAN6-201ENST00000373020 SLKQ9H2G2 1235 aaPredicted RBP15.79■□□□□ 0.12
TSPAN6-201ENST00000373020 RGS12O14924 1447 aa15.79■□□□□ 0.12
TSPAN6-201ENST00000373020 DIP2AQ14689 1571 aa15.79■□□□□ 0.12
TSPAN6-201ENST00000373020 SIRT2Q8IXJ6 389 aa15.78■□□□□ 0.12
TSPAN6-201ENST00000373020 KIAA0232Q92628 1395 aa15.78■□□□□ 0.12
TSPAN6-201ENST00000373020 RBM25P49756 843 aaKnown RBP15.78■□□□□ 0.12
TSPAN6-201ENST00000373020 ARHGEF10O15013 1369 aa15.77■□□□□ 0.12
TSPAN6-201ENST00000373020 NCOA3Q9Y6Q9 1424 aa15.77■□□□□ 0.11
TSPAN6-201ENST00000373020 ELL2O00472 640 aaPredicted RBP15.76■□□□□ 0.11
TSPAN6-201ENST00000373020 DCTN1Q14203 1278 aa15.76■□□□□ 0.11
TSPAN6-201ENST00000373020 XRN1Q8IZH2 1706 aaKnown RBP15.76■□□□□ 0.11
TSPAN6-201ENST00000373020 CHL1O00533 1208 aa15.76■□□□□ 0.11
TSPAN6-201ENST00000373020 SULT6B1Q6IMI4 303 aa15.76■□□□□ 0.11
TSPAN6-201ENST00000373020 C1orf115Q9H7X2 142 aa15.76■□□□□ 0.11
TSPAN6-201ENST00000373020 TTC21AQ8NDW8 1320 aa15.75■□□□□ 0.11
TSPAN6-201ENST00000373020 USP54Q70EL1 1684 aa15.75■□□□□ 0.11
TSPAN6-201ENST00000373020 CRB1P82279 1406 aa15.75■□□□□ 0.11
TSPAN6-201ENST00000373020 ATP10DQ9P241 1426 aa15.75■□□□□ 0.11
TSPAN6-201ENST00000373020 PIK3C2AO00443 1686 aa15.74■□□□□ 0.11
TSPAN6-201ENST00000373020 HAP1P54257 671 aaPredicted RBP15.74■□□□□ 0.11
TSPAN6-201ENST00000373020 INTS3Q68E01 1043 aaKnown RBP15.74■□□□□ 0.11
TSPAN6-201ENST00000373020 KDRP35968 1356 aa15.73■□□□□ 0.11
TSPAN6-201ENST00000373020 LRRC37A3O60309 1634 aa15.73■□□□□ 0.11
TSPAN6-201ENST00000373020 ANKRD45Q5TZF3 282 aa15.73■□□□□ 0.11
TSPAN6-201ENST00000373020 HSP90AB2PQ58FF8 381 aa15.72■□□□□ 0.11
TSPAN6-201ENST00000373020 SBNO1A3KN83 1393 aa15.72■□□□□ 0.11
TSPAN6-201ENST00000373020 RGPD8O14715 1765 aaPredicted RBP15.72■□□□□ 0.11
TSPAN6-201ENST00000373020 SNX21Q969T3 373 aa15.72■□□□□ 0.11
TSPAN6-201ENST00000373020 MARF1Q9Y4F3 1742 aaKnown RBP15.72■□□□□ 0.11
TSPAN6-201ENST00000373020 TBX22Q9Y458 520 aa15.71■□□□□ 0.11
TSPAN6-201ENST00000373020 FLT4P35916 1363 aa15.71■□□□□ 0.11
TSPAN6-201ENST00000373020 FER1L4A9Z1Z3 1794 aa15.71■□□□□ 0.11
TSPAN6-201ENST00000373020 IL27Q8NEV9 243 aa15.71■□□□□ 0.1
TSPAN6-201ENST00000373020 MAP3K19Q56UN5 1328 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms