RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 PEAK1Q9H792 1746 aa23■■□□□ 1.27
CTSA-204ENST00000372484 RLBP1P12271 317 aa23■■□□□ 1.27
CTSA-204ENST00000372484 TNNQ9UQP3 1299 aa23■■□□□ 1.27
CTSA-204ENST00000372484 LAS1LQ9Y4W2 734 aaKnown RBP22.99■■□□□ 1.27
CTSA-204ENST00000372484 ZKSCAN2Q63HK3 967 aa22.99■■□□□ 1.27
CTSA-204ENST00000372484 HSP90AB2PQ58FF8 381 aa22.98■■□□□ 1.27
CTSA-204ENST00000372484 LMOD3Q0VAK6 560 aa22.97■■□□□ 1.27
CTSA-204ENST00000372484 SSH1Q8WYL5 1049 aa22.97■■□□□ 1.27
CTSA-204ENST00000372484 THUMPD2Q9BTF0 503 aaKnown RBP22.97■■□□□ 1.27
CTSA-204ENST00000372484 PIK3C2AO00443 1686 aa22.97■■□□□ 1.27
CTSA-204ENST00000372484 AAMPQ13685 434 aa22.97■■□□□ 1.27
CTSA-204ENST00000372484 SULT6B1Q6IMI4 303 aa22.97■■□□□ 1.27
CTSA-204ENST00000372484 PDE4AP27815 886 aa22.96■■□□□ 1.27
CTSA-204ENST00000372484 DNAJC5Q9H3Z4 198 aa22.96■■□□□ 1.27
CTSA-204ENST00000372484 MAP3K19Q56UN5 1328 aa22.96■■□□□ 1.27
CTSA-204ENST00000372484 AEBP1Q8IUX7 1158 aa22.95■■□□□ 1.26
CTSA-204ENST00000372484 FTSJ3Q8IY81 847 aaKnown RBP22.95■■□□□ 1.26
CTSA-204ENST00000372484 MSH5O43196 834 aa22.94■■□□□ 1.26
CTSA-204ENST00000372484 IGHDP01880 384 aa22.94■■□□□ 1.26
CTSA-204ENST00000372484 GNAI1P63096 354 aa22.94■■□□□ 1.26
CTSA-204ENST00000372484 DZIP1LQ8IYY4 767 aaKnown RBP22.94■■□□□ 1.26
CTSA-204ENST00000372484 IFT57Q9NWB7 429 aa22.94■■□□□ 1.26
CTSA-204ENST00000372484 NLRP6P59044 892 aa22.93■■□□□ 1.26
CTSA-204ENST00000372484 RBM33Q96EV2 1170 aaKnown RBP22.93■■□□□ 1.26
CTSA-204ENST00000372484 BACH2Q9BYV9 841 aa22.93■■□□□ 1.26
CTSA-204ENST00000372484 RGPD1P0DJD0 1748 aa22.93■■□□□ 1.26
CTSA-204ENST00000372484 NPHP4O75161 1426 aaPredicted RBP22.92■■□□□ 1.26
CTSA-204ENST00000372484 SBNO1A3KN83 1393 aa22.92■■□□□ 1.26
CTSA-204ENST00000372484 MVPQ14764 893 aaKnown RBP22.92■■□□□ 1.26
CTSA-204ENST00000372484 FLT4P35916 1363 aa22.92■■□□□ 1.26
CTSA-204ENST00000372484 TRIM27P14373 513 aa22.91■■□□□ 1.26
CTSA-204ENST00000372484 ZNF853P0CG23 659 aa22.9■■□□□ 1.26
CTSA-204ENST00000372484 AMPHP49418 695 aa22.9■■□□□ 1.26
CTSA-204ENST00000372484 ALDH1L2Q3SY69 923 aa22.9■■□□□ 1.26
CTSA-204ENST00000372484 ATF7IPQ6VMQ6 1270 aa22.9■■□□□ 1.26
CTSA-204ENST00000372484 NOB1Q9ULX3 412 aaKnown RBP22.9■■□□□ 1.26
CTSA-204ENST00000372484 KIF16BQ96L93 1317 aa22.9■■□□□ 1.26
CTSA-204ENST00000372484 FAM83GA6ND36 823 aa22.9■■□□□ 1.26
CTSA-204ENST00000372484 PAK3O75914 559 aaPredicted RBP22.9■■□□□ 1.26
CTSA-204ENST00000372484 ZNF428Q96B54 188 aa22.9■■□□□ 1.26
CTSA-204ENST00000372484 PHF8Q9UPP1 1060 aa22.9■■□□□ 1.26
CTSA-204ENST00000372484 ANP32AP39687 249 aaKnown RBP22.89■■□□□ 1.25
CTSA-204ENST00000372484 ABTB2Q8N961 1025 aa22.89■■□□□ 1.25
CTSA-204ENST00000372484 MBIPQ9NS73 344 aa22.89■■□□□ 1.25
CTSA-204ENST00000372484 ADGRL3Q9HAR2 1447 aa22.89■■□□□ 1.25
CTSA-204ENST00000372484 NUTM2GQ5VZR2 741 aa22.88■■□□□ 1.25
CTSA-204ENST00000372484 CFAP44Q96MT7 982 aa22.88■■□□□ 1.25
CTSA-204ENST00000372484 ARHGEF10O15013 1369 aa22.87■■□□□ 1.25
CTSA-204ENST00000372484 IPO8O15397 1037 aaKnown RBP22.87■■□□□ 1.25
CTSA-204ENST00000372484 DCTN1Q14203 1278 aa22.87■■□□□ 1.25
CTSA-204ENST00000372484 MARF1Q9Y4F3 1742 aaKnown RBP22.87■■□□□ 1.25
CTSA-204ENST00000372484 PCDHB15Q9Y5E8 787 aa22.87■■□□□ 1.25
CTSA-204ENST00000372484 RGS3P49796 1198 aa22.86■■□□□ 1.25
CTSA-204ENST00000372484 USP54Q70EL1 1684 aa22.86■■□□□ 1.25
CTSA-204ENST00000372484 VAMP4O75379 141 aa22.85■■□□□ 1.25
CTSA-204ENST00000372484 C14orf37Q86TY3 774 aa22.85■■□□□ 1.25
CTSA-204ENST00000372484 ITPRIPQ8IWB1 547 aa22.84■■□□□ 1.25
CTSA-204ENST00000372484 TSPYL6Q8N831 410 aa22.84■■□□□ 1.25
CTSA-204ENST00000372484 ESCO1Q5FWF5 840 aa22.83■■□□□ 1.25
CTSA-204ENST00000372484 DDX19BQ9UMR2 479 aa22.83■■□□□ 1.25
CTSA-204ENST00000372484 BRPF1P55201 1214 aaPredicted RBP22.82■■□□□ 1.24
CTSA-204ENST00000372484 ELL2O00472 640 aaPredicted RBP22.82■■□□□ 1.24
CTSA-204ENST00000372484 KIF24Q5T7B8 1368 aa22.82■■□□□ 1.24
CTSA-204ENST00000372484 TWISTNBQ3B726 338 aaPredicted RBP22.81■■□□□ 1.24
CTSA-204ENST00000372484 RWDD1Q9H446 243 aaPredicted RBP22.81■■□□□ 1.24
CTSA-204ENST00000372484 EYA1Q99502 592 aa22.81■■□□□ 1.24
CTSA-204ENST00000372484 ANP32EQ9BTT0 268 aa22.81■■□□□ 1.24
CTSA-204ENST00000372484 KDRP35968 1356 aa22.81■■□□□ 1.24
CTSA-204ENST00000372484 HOXC9P31274 260 aa22.8■■□□□ 1.24
CTSA-204ENST00000372484 PSME1Q06323 249 aa22.8■■□□□ 1.24
CTSA-204ENST00000372484 TMEM57Q8N5G2 664 aa22.8■■□□□ 1.24
CTSA-204ENST00000372484 IGSF1Q8N6C5 1336 aa22.8■■□□□ 1.24
CTSA-204ENST00000372484 MCM10Q7L590 875 aa22.79■■□□□ 1.24
CTSA-204ENST00000372484 NPM2Q86SE8 214 aaKnown RBP22.79■■□□□ 1.24
CTSA-204ENST00000372484 C8orf58Q8NAV2 365 aa22.79■■□□□ 1.24
CTSA-204ENST00000372484 ERICH6Q7L0X2 663 aa22.79■■□□□ 1.24
CTSA-204ENST00000372484 MRPL50Q8N5N7 158 aaKnown RBP22.78■■□□□ 1.24
CTSA-204ENST00000372484 NWD1Q149M9 1564 aa22.78■■□□□ 1.24
CTSA-204ENST00000372484 FAM161AQ3B820 660 aa22.78■■□□□ 1.24
CTSA-204ENST00000372484 IPO9Q96P70 1041 aaKnown RBP22.78■■□□□ 1.24
CTSA-204ENST00000372484 MTHFSDQ2M296 383 aaKnown RBP22.76■■□□□ 1.23
CTSA-204ENST00000372484 ARHGAP45Q92619 1136 aa22.75■■□□□ 1.23
CTSA-204ENST00000372484 LTN1O94822 1766 aa22.75■■□□□ 1.23
CTSA-204ENST00000372484 CHL1O00533 1208 aa22.75■■□□□ 1.23
CTSA-204ENST00000372484 C8orf34Q49A92 452 aa22.74■■□□□ 1.23
CTSA-204ENST00000372484 PROSER2Q86WR7 435 aaPredicted RBP22.74■■□□□ 1.23
CTSA-204ENST00000372484 RTF1Q92541 710 aaKnown RBP22.74■■□□□ 1.23
CTSA-204ENST00000372484 FOXO3O43524 673 aa22.73■■□□□ 1.23
CTSA-204ENST00000372484 GAS2L2Q8NHY3 880 aa22.73■■□□□ 1.23
CTSA-204ENST00000372484 ORAI2Q96SN7 254 aa22.73■■□□□ 1.23
CTSA-204ENST00000372484 ZBTB40Q9NUA8 1239 aa22.73■■□□□ 1.23
CTSA-204ENST00000372484 RTL1A6NKG5 1358 aa22.73■■□□□ 1.23
CTSA-204ENST00000372484 LTV1Q96GA3 475 aaPredicted RBP22.72■■□□□ 1.23
CTSA-204ENST00000372484 NOP58Q9Y2X3 529 aaKnown RBP22.72■■□□□ 1.23
CTSA-204ENST00000372484 CRB1P82279 1406 aa22.71■■□□□ 1.23
CTSA-204ENST00000372484 HAP1P54257 671 aaPredicted RBP22.7■■□□□ 1.23
CTSA-204ENST00000372484 PDZRN3Q9UPQ7 1066 aa22.7■■□□□ 1.23
CTSA-204ENST00000372484 NFAT5O94916 1531 aa22.7■■□□□ 1.22
CTSA-204ENST00000372484 HDAC1Q13547 482 aaPredicted RBP22.7■■□□□ 1.22
CTSA-204ENST00000372484 KCNH5Q8NCM2 988 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms