RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 MAP3K11Q16584 847 aa17.94■□□□□ 0.46
COL5A1-201ENST00000371817 C6orf163Q5TEZ5 329 aa17.94■□□□□ 0.46
COL5A1-201ENST00000371817 SETSIPP0DME0 302 aa17.93■□□□□ 0.46
COL5A1-201ENST00000371817 PAF1Q8N7H5 531 aa17.93■□□□□ 0.46
COL5A1-201ENST00000371817 PDIA4P13667 645 aaKnown RBP17.93■□□□□ 0.46
COL5A1-201ENST00000371817 FAM114A1Q8IWE2 563 aa17.93■□□□□ 0.46
COL5A1-201ENST00000371817 ZFP91Q96JP5 570 aaPredicted RBP17.93■□□□□ 0.46
COL5A1-201ENST00000371817 APAF1O14727 1248 aa17.93■□□□□ 0.46
COL5A1-201ENST00000371817 SARNPP82979 210 aaKnown RBP17.93■□□□□ 0.46
COL5A1-201ENST00000371817 C16orf45Q96MC5 204 aaPredicted RBP17.92■□□□□ 0.46
COL5A1-201ENST00000371817 URI1O94763 535 aaPredicted RBP17.92■□□□□ 0.46
COL5A1-201ENST00000371817 CFAP100Q494V2 611 aa17.92■□□□□ 0.46
COL5A1-201ENST00000371817 SWAP70Q9UH65 585 aa17.92■□□□□ 0.46
COL5A1-201ENST00000371817 PANK1Q8TE04 598 aa17.91■□□□□ 0.46
COL5A1-201ENST00000371817 PAXBP1Q9Y5B6 917 aa17.91■□□□□ 0.46
COL5A1-201ENST00000371817 TANGO6Q9C0B7 1094 aa17.91■□□□□ 0.46
COL5A1-201ENST00000371817 DDX58O95786 925 aaKnown RBP17.91■□□□□ 0.46
COL5A1-201ENST00000371817 SPATA32Q96LK8 384 aa17.91■□□□□ 0.46
COL5A1-201ENST00000371817 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.91■□□□□ 0.46
COL5A1-201ENST00000371817 PLCD3Q8N3E9 789 aa17.9■□□□□ 0.46
COL5A1-201ENST00000371817 UBE4AQ14139 1066 aa17.9■□□□□ 0.46
COL5A1-201ENST00000371817 KRT18P05783 430 aaKnown RBP17.9■□□□□ 0.46
COL5A1-201ENST00000371817 SEPT11Q9NVA2 429 aaKnown RBP17.9■□□□□ 0.46
COL5A1-201ENST00000371817 PAIP2Q9BPZ3 127 aaKnown RBP17.9■□□□□ 0.46
COL5A1-201ENST00000371817 EIF4G1Q04637 1599 aaKnown RBP17.89■□□□□ 0.45
COL5A1-201ENST00000371817 CCDC160A6NGH7 325 aa17.89■□□□□ 0.45
COL5A1-201ENST00000371817 ANKRD18BA2A2Z9 1011 aa17.89■□□□□ 0.45
COL5A1-201ENST00000371817 KIF4BQ2VIQ3 1234 aa17.89■□□□□ 0.45
COL5A1-201ENST00000371817 GOPCQ9HD26 462 aa17.89■□□□□ 0.45
COL5A1-201ENST00000371817 RAI14Q9P0K7 980 aa17.89■□□□□ 0.45
COL5A1-201ENST00000371817 USP47Q96K76 1375 aa17.89■□□□□ 0.45
COL5A1-201ENST00000371817 C1orf141Q5JVX7 400 aa17.89■□□□□ 0.45
COL5A1-201ENST00000371817 CCDC83Q8IWF9 413 aa17.89■□□□□ 0.45
COL5A1-201ENST00000371817 FKBP5Q13451 457 aaPredicted RBP17.88■□□□□ 0.45
COL5A1-201ENST00000371817 CEP83Q9Y592 693 aa17.88■□□□□ 0.45
COL5A1-201ENST00000371817 SPECC1Q5M775 1068 aa17.88■□□□□ 0.45
COL5A1-201ENST00000371817 NEMFO60524 1076 aa17.88■□□□□ 0.45
COL5A1-201ENST00000371817 DDX23Q9BUQ8 820 aaKnown RBP17.88■□□□□ 0.45
COL5A1-201ENST00000371817 SPA17Q15506 151 aa17.87■□□□□ 0.45
COL5A1-201ENST00000371817 LARP1BQ659C4 914 aaKnown RBP17.87■□□□□ 0.45
COL5A1-201ENST00000371817 ATP2B1P20020 1258 aa17.87■□□□□ 0.45
COL5A1-201ENST00000371817 CCDC183Q5T5S1 534 aa17.87■□□□□ 0.45
COL5A1-201ENST00000371817 ANKS4BQ8N8V4 417 aa17.87■□□□□ 0.45
COL5A1-201ENST00000371817 CYP46A1Q9Y6A2 500 aa17.87■□□□□ 0.45
COL5A1-201ENST00000371817 WASHC4Q2M389 1173 aa17.87■□□□□ 0.45
COL5A1-201ENST00000371817 MSL1Q68DK7 614 aa17.87■□□□□ 0.45
COL5A1-201ENST00000371817 EIF5P55010 431 aaKnown RBP17.86■□□□□ 0.45
COL5A1-201ENST00000371817 ST20-MTHFSA0A0A6YYL1 179 aa17.86■□□□□ 0.45
COL5A1-201ENST00000371817 GBP6Q6ZN66 633 aa17.86■□□□□ 0.45
COL5A1-201ENST00000371817 TEFQ10587 303 aa17.86■□□□□ 0.45
COL5A1-201ENST00000371817 DDX46Q7L014 1031 aaKnown RBP17.85■□□□□ 0.45
COL5A1-201ENST00000371817 DESP17661 470 aa17.85■□□□□ 0.45
COL5A1-201ENST00000371817 NAA15Q9BXJ9 866 aaKnown RBP17.85■□□□□ 0.45
COL5A1-201ENST00000371817 CLIP2Q9UDT6 1046 aa17.85■□□□□ 0.45
COL5A1-201ENST00000371817 CEP57Q86XR8 500 aa17.85■□□□□ 0.45
COL5A1-201ENST00000371817 RUNDC1Q96C34 613 aa17.85■□□□□ 0.45
COL5A1-201ENST00000371817 KIF3CO14782 793 aa17.85■□□□□ 0.45
COL5A1-201ENST00000371817 NAP1L3Q99457 506 aaPredicted RBP17.85■□□□□ 0.45
COL5A1-201ENST00000371817 TAOK3Q9H2K8 898 aa17.85■□□□□ 0.45
COL5A1-201ENST00000371817 WWC2Q6AWC2 1192 aa17.85■□□□□ 0.45
COL5A1-201ENST00000371817 RSRC1Q96IZ7 334 aaKnown RBP17.85■□□□□ 0.45
COL5A1-201ENST00000371817 GSTTP1A0A1W2PQM5 241 aa17.85■□□□□ 0.45
COL5A1-201ENST00000371817 RIPK4P57078 832 aa17.85■□□□□ 0.45
COL5A1-201ENST00000371817 CCDC6Q16204 474 aa17.85■□□□□ 0.45
COL5A1-201ENST00000371817 PAFAH1B1P43034 410 aa17.84■□□□□ 0.45
COL5A1-201ENST00000371817 ERC1Q8IUD2 1116 aa17.84■□□□□ 0.45
COL5A1-201ENST00000371817 ARFGAP3Q9NP61 516 aa17.84■□□□□ 0.45
COL5A1-201ENST00000371817 FBF1Q8TES7 1133 aa17.84■□□□□ 0.45
COL5A1-201ENST00000371817 EIF2S2P20042 333 aaKnown RBP17.84■□□□□ 0.45
COL5A1-201ENST00000371817 MICALL1Q8N3F8 863 aa17.84■□□□□ 0.45
COL5A1-201ENST00000371817 FSD1Q9BTV5 496 aa17.84■□□□□ 0.45
COL5A1-201ENST00000371817 GOLGA6L9A6NEM1 432 aa17.83■□□□□ 0.45
COL5A1-201ENST00000371817 CETN2P41208 172 aa17.83■□□□□ 0.45
COL5A1-201ENST00000371817 GSDMDP57764 484 aa17.83■□□□□ 0.45
COL5A1-201ENST00000371817 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.83■□□□□ 0.45
COL5A1-201ENST00000371817 V9GYY5 206 aaPredicted RBP17.83■□□□□ 0.45
COL5A1-201ENST00000371817 RSPH14Q9UHP6 348 aa17.83■□□□□ 0.45
COL5A1-201ENST00000371817 LTV1Q96GA3 475 aaPredicted RBP17.83■□□□□ 0.44
COL5A1-201ENST00000371817 CEP112Q8N8E3 955 aa17.83■□□□□ 0.44
COL5A1-201ENST00000371817 RASSF4Q9H2L5 321 aa17.83■□□□□ 0.44
COL5A1-201ENST00000371817 CCDC94Q9BW85 323 aaPredicted RBP17.82■□□□□ 0.44
COL5A1-201ENST00000371817 A0A1B0GUA9 196 aa17.82■□□□□ 0.44
COL5A1-201ENST00000371817 TRIM22Q8IYM9 498 aa17.82■□□□□ 0.44
COL5A1-201ENST00000371817 GCC1Q96CN9 775 aa17.82■□□□□ 0.44
COL5A1-201ENST00000371817 CEP135Q66GS9 1140 aa17.81■□□□□ 0.44
COL5A1-201ENST00000371817 TOP1P11387 765 aaKnown RBP17.81■□□□□ 0.44
COL5A1-201ENST00000371817 CCDC178Q5BJE1 867 aa17.81■□□□□ 0.44
COL5A1-201ENST00000371817 TMEM132AQ24JP5 1023 aa17.81■□□□□ 0.44
COL5A1-201ENST00000371817 ANAPC15P60006 121 aa17.81■□□□□ 0.44
COL5A1-201ENST00000371817 HLTFQ14527 1009 aaKnown RBP eCLIP17.81■□□□□ 0.44
COL5A1-201ENST00000371817 UBTFL1P0CB47 393 aaPredicted RBP17.8■□□□□ 0.44
COL5A1-201ENST00000371817 KDM4AO75164 1064 aa17.8■□□□□ 0.44
COL5A1-201ENST00000371817 ZFYP08048 801 aaPredicted RBP17.8■□□□□ 0.44
COL5A1-201ENST00000371817 SNW1Q13573 536 aaKnown RBP17.8■□□□□ 0.44
COL5A1-201ENST00000371817 RBM28Q9NW13 759 aaKnown RBP17.8■□□□□ 0.44
COL5A1-201ENST00000371817 HSF2BPO75031 334 aa17.8■□□□□ 0.44
COL5A1-201ENST00000371817 CLCN1P35523 988 aa17.8■□□□□ 0.44
COL5A1-201ENST00000371817 PDZRN3Q9UPQ7 1066 aa17.8■□□□□ 0.44
COL5A1-201ENST00000371817 KIF5BP33176 963 aa17.8■□□□□ 0.44
COL5A1-201ENST00000371817 TTC5Q8N0Z6 440 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms