RNA–Protein interactions for RNA: ENST00000370563.3

CLCA4-201, Transcript of chloride channel accessory 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCA4, Length 3,211 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA4-201ENST00000370563 C8orf48Q96LL4 319 aa4.71□□□□□ -1.66
CLCA4-201ENST00000370563 DCTN4Q9UJW0 460 aa4.71□□□□□ -1.66
CLCA4-201ENST00000370563 PPFIA4O75335 1185 aa4.7□□□□□ -1.66
CLCA4-201ENST00000370563 FMR1Q06787 632 aaKnown RBP eCLIP4.7□□□□□ -1.66
CLCA4-201ENST00000370563 JAZF1Q86VZ6 243 aa4.7□□□□□ -1.66
CLCA4-201ENST00000370563 SCYL1Q96KG9 808 aa4.7□□□□□ -1.66
CLCA4-201ENST00000370563 ZSWIM4Q9H7M6 989 aa4.7□□□□□ -1.66
CLCA4-201ENST00000370563 COL6A1P12109 1028 aa4.7□□□□□ -1.66
CLCA4-201ENST00000370563 USP46P62068 366 aa4.7□□□□□ -1.66
CLCA4-201ENST00000370563 RBCK1Q9BYM8 510 aa4.7□□□□□ -1.66
CLCA4-201ENST00000370563 ZNF69Q9UC07 566 aa4.7□□□□□ -1.66
CLCA4-201ENST00000370563 MOXD2PA6NHM9 499 aa4.7□□□□□ -1.66
CLCA4-201ENST00000370563 U2SURPO15042 1029 aaKnown RBP4.7□□□□□ -1.66
CLCA4-201ENST00000370563 SLC34A2O95436 690 aa4.7□□□□□ -1.66
CLCA4-201ENST00000370563 IBSPP21815 317 aaPredicted RBP4.7□□□□□ -1.66
CLCA4-201ENST00000370563 PLEKHG6Q3KR16 790 aa4.7□□□□□ -1.66
CLCA4-201ENST00000370563 MAMSTRQ6ZN01 415 aa4.7□□□□□ -1.66
CLCA4-201ENST00000370563 CABLES1Q8TDN4 633 aa4.7□□□□□ -1.66
CLCA4-201ENST00000370563 UPF1Q92900 1129 aaKnown RBP eCLIP4.7□□□□□ -1.66
CLCA4-201ENST00000370563 DMGDHQ9UI17 866 aaKnown RBP4.7□□□□□ -1.66
CLCA4-201ENST00000370563 PPP1R3GB7ZBB8 358 aa4.69□□□□□ -1.66
CLCA4-201ENST00000370563 MAP3K13O43283 966 aa4.69□□□□□ -1.66
CLCA4-201ENST00000370563 CREB3O43889 395 aa4.69□□□□□ -1.66
CLCA4-201ENST00000370563 DKK1O94907 266 aa4.69□□□□□ -1.66
CLCA4-201ENST00000370563 NAP1L5Q96NT1 182 aaPredicted RBP4.69□□□□□ -1.66
CLCA4-201ENST00000370563 SPOCK3Q9BQ16 436 aa4.69□□□□□ -1.66
CLCA4-201ENST00000370563 POTECB2RU33 542 aa4.69□□□□□ -1.66
CLCA4-201ENST00000370563 NDUFV2P19404 249 aa4.69□□□□□ -1.66
CLCA4-201ENST00000370563 PPP4CP60510 307 aa4.69□□□□□ -1.66
CLCA4-201ENST00000370563 SEMA3FQ13275 785 aa4.69□□□□□ -1.66
CLCA4-201ENST00000370563 PNMA1Q8ND90 353 aa4.69□□□□□ -1.66
CLCA4-201ENST00000370563 CAPN10Q9HC96 672 aa4.69□□□□□ -1.66
CLCA4-201ENST00000370563 ATP2B4P23634 1241 aa4.68□□□□□ -1.66
CLCA4-201ENST00000370563 SF3B2Q13435 895 aaKnown RBP4.68□□□□□ -1.66
CLCA4-201ENST00000370563 SERINC3Q13530 473 aa4.68□□□□□ -1.66
CLCA4-201ENST00000370563 VPS72Q15906 364 aa4.68□□□□□ -1.66
CLCA4-201ENST00000370563 ZSCAN29Q8IWY8 852 aaPredicted RBP4.68□□□□□ -1.66
CLCA4-201ENST00000370563 MAPK1P28482 360 aa4.68□□□□□ -1.66
CLCA4-201ENST00000370563 PTK7Q13308 1070 aa4.68□□□□□ -1.66
CLCA4-201ENST00000370563 NFE2L2Q16236 605 aa4.68□□□□□ -1.66
CLCA4-201ENST00000370563 CRTC2Q53ET0 693 aaPredicted RBP4.68□□□□□ -1.66
CLCA4-201ENST00000370563 TMC4Q7Z404 712 aa4.68□□□□□ -1.66
CLCA4-201ENST00000370563 GPATCH11Q8N954 259 aa4.68□□□□□ -1.66
CLCA4-201ENST00000370563 SNRNP27Q8WVK2 155 aaKnown RBP4.68□□□□□ -1.66
CLCA4-201ENST00000370563 ALKBH8Q96BT7 664 aaKnown RBP4.68□□□□□ -1.66
CLCA4-201ENST00000370563 PIK3CDO00329 1044 aa4.68□□□□□ -1.66
CLCA4-201ENST00000370563 TNNI2P48788 182 aa4.68□□□□□ -1.66
CLCA4-201ENST00000370563 CTDSPL2Q05D32 466 aa4.68□□□□□ -1.66
CLCA4-201ENST00000370563 BMS1Q14692 1282 aaKnown RBP4.68□□□□□ -1.66
CLCA4-201ENST00000370563 RPUSD2Q8IZ73 545 aaKnown RBP4.68□□□□□ -1.66
CLCA4-201ENST00000370563 EPS8L1Q8TE68 723 aa4.68□□□□□ -1.66
CLCA4-201ENST00000370563 G3BP2Q9UN86 482 aaKnown RBP4.68□□□□□ -1.66
CLCA4-201ENST00000370563 COL4A3BPQ9Y5P4 624 aa4.68□□□□□ -1.66
CLCA4-201ENST00000370563 NUTM2BA6NNL0 878 aaPredicted RBP4.67□□□□□ -1.66
CLCA4-201ENST00000370563 NUTM2EB1AL46 878 aaPredicted RBP4.67□□□□□ -1.66
CLCA4-201ENST00000370563 PAX3P23760 479 aa4.67□□□□□ -1.66
CLCA4-201ENST00000370563 GRIPAP1Q4V328 841 aa4.67□□□□□ -1.66
CLCA4-201ENST00000370563 EAPPQ56P03 285 aaPredicted RBP4.67□□□□□ -1.66
CLCA4-201ENST00000370563 NUTM2DQ5VT03 806 aaPredicted RBP4.67□□□□□ -1.66
CLCA4-201ENST00000370563 PPP1R18Q6NYC8 613 aa4.67□□□□□ -1.66
CLCA4-201ENST00000370563 NUTM2AQ8IVF1 878 aaPredicted RBP4.67□□□□□ -1.66
CLCA4-201ENST00000370563 PTCD2Q8WV60 388 aaKnown RBP4.67□□□□□ -1.66
CLCA4-201ENST00000370563 ACBD3Q9H3P7 528 aa4.67□□□□□ -1.66
CLCA4-201ENST00000370563 ANO2Q9NQ90 1003 aa4.67□□□□□ -1.66
CLCA4-201ENST00000370563 M0R2N6 131 aa4.67□□□□□ -1.66
CLCA4-201ENST00000370563 DAB2P98082 770 aa4.67□□□□□ -1.66
CLCA4-201ENST00000370563 TMC2Q8TDI7 906 aa4.67□□□□□ -1.66
CLCA4-201ENST00000370563 IRF2BPLQ9H1B7 796 aa4.67□□□□□ -1.66
CLCA4-201ENST00000370563 PCDH12Q9NPG4 1184 aa4.67□□□□□ -1.66
CLCA4-201ENST00000370563 MRPL42Q9Y6G3 142 aaKnown RBP4.67□□□□□ -1.66
CLCA4-201ENST00000370563 USP17L15C9J2P7 530 aa4.67□□□□□ -1.66
CLCA4-201ENST00000370563 USP17L10C9JJH3 530 aa4.67□□□□□ -1.66
CLCA4-201ENST00000370563 USP17L13C9JLJ4 530 aa4.67□□□□□ -1.66
CLCA4-201ENST00000370563 USP17L12C9JPN9 530 aa4.67□□□□□ -1.66
CLCA4-201ENST00000370563 USP17L11C9JVI0 530 aa4.67□□□□□ -1.66
CLCA4-201ENST00000370563 USP17L21D6R901 530 aa4.67□□□□□ -1.66
CLCA4-201ENST00000370563 USP17L18D6R9N7 530 aa4.67□□□□□ -1.66
CLCA4-201ENST00000370563 USP17L22D6RA61 530 aa4.67□□□□□ -1.66
CLCA4-201ENST00000370563 USP17L17D6RBQ6 530 aa4.67□□□□□ -1.66
CLCA4-201ENST00000370563 USP17L19D6RCP7 530 aa4.67□□□□□ -1.66
CLCA4-201ENST00000370563 USP17L20D6RJB6 530 aa4.67□□□□□ -1.66
CLCA4-201ENST00000370563 ATP5J2-PTCD1G3V325 749 aa4.67□□□□□ -1.66
CLCA4-201ENST00000370563 DNAJA1P31689 397 aaKnown RBP4.67□□□□□ -1.66
CLCA4-201ENST00000370563 EIF4G2P78344 907 aaKnown RBP eCLIP4.67□□□□□ -1.66
CLCA4-201ENST00000370563 USP17L24Q0WX57 530 aa4.67□□□□□ -1.66
CLCA4-201ENST00000370563 ZNF211Q13398 564 aaPredicted RBP4.67□□□□□ -1.66
CLCA4-201ENST00000370563 DSC3Q14574 896 aa4.67□□□□□ -1.66
CLCA4-201ENST00000370563 POTEEQ6S8J3 1075 aa4.67□□□□□ -1.66
CLCA4-201ENST00000370563 FAM9BQ8IZU0 186 aa4.67□□□□□ -1.66
CLCA4-201ENST00000370563 STAG1Q8WVM7 1258 aa4.67□□□□□ -1.66
CLCA4-201ENST00000370563 OSBPL2Q9H1P3 480 aa4.67□□□□□ -1.66
CLCA4-201ENST00000370563 IFT57Q9NWB7 429 aa4.67□□□□□ -1.66
CLCA4-201ENST00000370563 H3BRB1 525 aa4.66□□□□□ -1.66
CLCA4-201ENST00000370563 ZEB1P37275 1124 aaPredicted RBP4.66□□□□□ -1.66
CLCA4-201ENST00000370563 RNF187Q5TA31 235 aaPredicted RBP4.66□□□□□ -1.66
CLCA4-201ENST00000370563 TMEM87AQ8NBN3 555 aa4.66□□□□□ -1.66
CLCA4-201ENST00000370563 ZBTB3Q9H5J0 574 aa4.66□□□□□ -1.66
CLCA4-201ENST00000370563 TUT1Q9H6E5 874 aaKnown RBP4.66□□□□□ -1.66
CLCA4-201ENST00000370563 PNMA2Q9UL42 364 aa4.66□□□□□ -1.66
CLCA4-201ENST00000370563 PRDM2Q13029 1718 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms