RNA–Protein interactions for RNA: ENST00000370328.3

GABRE-201, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRE, Length 3,152 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-201ENST00000370328 FAM98CQ17RN3 349 aaKnown RBP10.46□□□□□ -0.74
GABRE-201ENST00000370328 RSPH6AQ9H0K4 717 aa10.46□□□□□ -0.74
GABRE-201ENST00000370328 SBNO2Q9Y2G9 1366 aa10.46□□□□□ -0.74
GABRE-201ENST00000370328 U2SURPO15042 1029 aaKnown RBP10.45□□□□□ -0.74
GABRE-201ENST00000370328 LARP1Q6PKG0 1096 aaKnown RBP10.45□□□□□ -0.74
GABRE-201ENST00000370328 POTEAQ6S8J7 498 aa10.45□□□□□ -0.74
GABRE-201ENST00000370328 NBR1Q14596 966 aa10.45□□□□□ -0.74
GABRE-201ENST00000370328 CDC42BPGQ6DT37 1551 aa10.45□□□□□ -0.74
GABRE-201ENST00000370328 ANKRD36BQ8N2N9 1353 aa10.45□□□□□ -0.74
GABRE-201ENST00000370328 ANKARQ7Z5J8 1434 aa10.44□□□□□ -0.74
GABRE-201ENST00000370328 MAP3K19Q56UN5 1328 aa10.44□□□□□ -0.74
GABRE-201ENST00000370328 MTHFSP49914 203 aa10.44□□□□□ -0.74
GABRE-201ENST00000370328 TNS3Q68CZ2 1445 aa10.44□□□□□ -0.74
GABRE-201ENST00000370328 HMOX1P09601 288 aa10.43□□□□□ -0.74
GABRE-201ENST00000370328 RBM19Q9Y4C8 960 aaKnown RBP10.43□□□□□ -0.74
GABRE-201ENST00000370328 POLR3AO14802 1390 aaPredicted RBP10.43□□□□□ -0.74
GABRE-201ENST00000370328 KAT6BQ8WYB5 2073 aa10.43□□□□□ -0.74
GABRE-201ENST00000370328 RGS17Q9UGC6 210 aaPredicted RBP10.42□□□□□ -0.74
GABRE-201ENST00000370328 PER1O15534 1290 aaPredicted RBP10.42□□□□□ -0.74
GABRE-201ENST00000370328 ARHGEF10O15013 1369 aa10.42□□□□□ -0.74
GABRE-201ENST00000370328 CHMP4BQ9H444 224 aaKnown RBP10.42□□□□□ -0.74
GABRE-201ENST00000370328 KIAA1210Q9ULL0 1709 aa10.41□□□□□ -0.74
GABRE-201ENST00000370328 USP32Q8NFA0 1604 aa10.41□□□□□ -0.74
GABRE-201ENST00000370328 PXDNQ92626 1479 aa10.41□□□□□ -0.74
GABRE-201ENST00000370328 CD163L1Q9NR16 1453 aa10.41□□□□□ -0.74
GABRE-201ENST00000370328 ILDR2Q71H61 639 aa10.4□□□□□ -0.74
GABRE-201ENST00000370328 KCNH5Q8NCM2 988 aa10.4□□□□□ -0.74
GABRE-201ENST00000370328 DDX54Q8TDD1 881 aaKnown RBP10.4□□□□□ -0.74
GABRE-201ENST00000370328 CFAP44Q96MT7 982 aa10.4□□□□□ -0.74
GABRE-201ENST00000370328 ANKRD24Q8TF21 1146 aa10.4□□□□□ -0.74
GABRE-201ENST00000370328 PHLPP1O60346 1717 aa10.4□□□□□ -0.74
GABRE-201ENST00000370328 SPATA31A6Q5VVP1 1343 aa10.4□□□□□ -0.74
GABRE-201ENST00000370328 CPSF1Q10570 1443 aaKnown RBP10.4□□□□□ -0.74
GABRE-201ENST00000370328 LRP6O75581 1613 aa10.4□□□□□ -0.74
GABRE-201ENST00000370328 NEUROD2Q15784 382 aa10.4□□□□□ -0.75
GABRE-201ENST00000370328 ARHGEF25Q86VW2 580 aa10.4□□□□□ -0.75
GABRE-201ENST00000370328 POLKQ9UBT6 870 aa10.4□□□□□ -0.75
GABRE-201ENST00000370328 TTC21AQ8NDW8 1320 aa10.39□□□□□ -0.75
GABRE-201ENST00000370328 SYTL4Q96C24 671 aaPredicted RBP10.39□□□□□ -0.75
GABRE-201ENST00000370328 ANP32CO43423 234 aa10.39□□□□□ -0.75
GABRE-201ENST00000370328 CCDC184Q52MB2 194 aa10.39□□□□□ -0.75
GABRE-201ENST00000370328 NAP1L2Q9ULW6 460 aaPredicted RBP10.39□□□□□ -0.75
GABRE-201ENST00000370328 EDC4Q6P2E9 1401 aaKnown RBP10.39□□□□□ -0.75
GABRE-201ENST00000370328 FMN2Q9NZ56 1722 aa10.38□□□□□ -0.75
GABRE-201ENST00000370328 RXRBP28702 533 aa10.38□□□□□ -0.75
GABRE-201ENST00000370328 UNC5CLQ8IV45 518 aa10.38□□□□□ -0.75
GABRE-201ENST00000370328 SBNO1A3KN83 1393 aa10.38□□□□□ -0.75
GABRE-201ENST00000370328 KNDC1Q76NI1 1749 aa10.38□□□□□ -0.75
GABRE-201ENST00000370328 AEBP1Q8IUX7 1158 aa10.38□□□□□ -0.75
GABRE-201ENST00000370328 FAM9BQ8IZU0 186 aa10.38□□□□□ -0.75
GABRE-201ENST00000370328 HOXC9P31274 260 aa10.37□□□□□ -0.75
GABRE-201ENST00000370328 U2AF1L5P0DN76 240 aaPredicted RBP10.37□□□□□ -0.75
GABRE-201ENST00000370328 U2AF1Q01081 240 aaKnown RBP eCLIP10.37□□□□□ -0.754e-7■■■■□ 20.7
GABRE-201ENST00000370328 NBPF6Q5VWK0 638 aa10.37□□□□□ -0.75
GABRE-201ENST00000370328 NBPF4Q96M43 638 aa10.37□□□□□ -0.75
GABRE-201ENST00000370328 IQSEC2Q5JU85 1478 aa10.37□□□□□ -0.75
GABRE-201ENST00000370328 GJD4Q96KN9 370 aaPredicted RBP10.36□□□□□ -0.75
GABRE-201ENST00000370328 PUS7Q96PZ0 661 aaKnown RBP10.36□□□□□ -0.75
GABRE-201ENST00000370328 TRPC5Q9UL62 973 aaPredicted RBP10.36□□□□□ -0.75
GABRE-201ENST00000370328 SULT6B1Q6IMI4 303 aa10.36□□□□□ -0.75
GABRE-201ENST00000370328 ZNF772Q68DY9 489 aaPredicted RBP10.35□□□□□ -0.75
GABRE-201ENST00000370328 CCDC146Q8IYE0 955 aa10.35□□□□□ -0.75
GABRE-201ENST00000370328 PPP2R1AP30153 589 aa10.35□□□□□ -0.75
GABRE-201ENST00000370328 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.35□□□□□ -0.75
GABRE-201ENST00000370328 SEPT12Q8IYM1 358 aa10.35□□□□□ -0.75
GABRE-201ENST00000370328 ACSBG1Q96GR2 724 aa10.35□□□□□ -0.75
GABRE-201ENST00000370328 MRS2Q9HD23 443 aa10.35□□□□□ -0.75
GABRE-201ENST00000370328 COL16A1Q07092 1604 aaPredicted RBP10.34□□□□□ -0.75
GABRE-201ENST00000370328 PDE3BQ13370 1112 aa10.34□□□□□ -0.75
GABRE-201ENST00000370328 NINLQ9Y2I6 1382 aa10.34□□□□□ -0.75
GABRE-201ENST00000370328 EIF4A2Q14240 407 aaKnown RBP10.34□□□□□ -0.75
GABRE-201ENST00000370328 PRKRIP1Q9H875 184 aaPredicted RBP10.34□□□□□ -0.75
GABRE-201ENST00000370328 RRP7AQ9Y3A4 280 aaKnown RBP10.34□□□□□ -0.75
GABRE-201ENST00000370328 ADGRB2O60241 1585 aa10.33□□□□□ -0.76
GABRE-201ENST00000370328 IP6K1Q92551 441 aa10.33□□□□□ -0.76
GABRE-201ENST00000370328 EYA1Q99502 592 aa10.33□□□□□ -0.76
GABRE-201ENST00000370328 SSH2Q76I76 1423 aa10.33□□□□□ -0.76
GABRE-201ENST00000370328 ERBB3P21860 1342 aa10.33□□□□□ -0.76
GABRE-201ENST00000370328 CDK11BP21127 795 aaKnown RBP10.33□□□□□ -0.76
GABRE-201ENST00000370328 FNBP4Q8N3X1 1017 aaPredicted RBP10.33□□□□□ -0.76
GABRE-201ENST00000370328 RAPGEF4Q8WZA2 1011 aa10.33□□□□□ -0.76
GABRE-201ENST00000370328 USP19O94966 1318 aa10.32□□□□□ -0.76
GABRE-201ENST00000370328 DIAPH1O60610 1272 aaKnown RBP10.32□□□□□ -0.76
GABRE-201ENST00000370328 RBM6P78332 1123 aaKnown RBP10.31□□□□□ -0.76
GABRE-201ENST00000370328 TCP11L2Q8N4U5 519 aa10.31□□□□□ -0.76
GABRE-201ENST00000370328 KCNQ4P56696 695 aa10.31□□□□□ -0.76
GABRE-201ENST00000370328 DDB1Q16531 1140 aa10.31□□□□□ -0.76
GABRE-201ENST00000370328 CFAP53Q96M91 514 aa10.3□□□□□ -0.76
GABRE-201ENST00000370328 MED1Q15648 1581 aaPredicted RBP10.3□□□□□ -0.76
GABRE-201ENST00000370328 PTF1AQ7RTS3 328 aa10.3□□□□□ -0.76
GABRE-201ENST00000370328 AHDC1Q5TGY3 1603 aaPredicted RBP10.3□□□□□ -0.76
GABRE-201ENST00000370328 BCL9LQ86UU0 1499 aa10.3□□□□□ -0.76
GABRE-201ENST00000370328 EXOC5O00471 708 aa10.29□□□□□ -0.76
GABRE-201ENST00000370328 BBXQ8WY36 941 aaPredicted RBP10.29□□□□□ -0.76
GABRE-201ENST00000370328 WDR17Q8IZU2 1322 aa10.29□□□□□ -0.76
GABRE-201ENST00000370328 TRIM37O94972 964 aa10.29□□□□□ -0.76
GABRE-201ENST00000370328 WDR43Q15061 677 aaKnown RBP eCLIP10.29□□□□□ -0.76
GABRE-201ENST00000370328 OVOS2A0A0J9YW53 1432 aa10.29□□□□□ -0.76
GABRE-201ENST00000370328 OVOS2Q6IE36 1432 aa10.29□□□□□ -0.76
GABRE-201ENST00000370328 CAMTA1Q9Y6Y1 1673 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms