RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 KIAA0232Q92628 1395 aa14.61□□□□□ -0.07
BRCC3-204ENST00000369462 HSPA1LP34931 641 aa14.61□□□□□ -0.07
BRCC3-204ENST00000369462 CHRNA2Q15822 529 aa14.61□□□□□ -0.07
BRCC3-204ENST00000369462 U2AF1L5P0DN76 240 aaPredicted RBP14.61□□□□□ -0.07
BRCC3-204ENST00000369462 IL13P35225 146 aa14.61□□□□□ -0.07
BRCC3-204ENST00000369462 U2AF1Q01081 240 aaKnown RBP eCLIP14.61□□□□□ -0.07
BRCC3-204ENST00000369462 EIF4A2Q14240 407 aaKnown RBP14.61□□□□□ -0.07
BRCC3-204ENST00000369462 PRDM11Q9NQV5 511 aa14.61□□□□□ -0.07
BRCC3-204ENST00000369462 LTV1Q96GA3 475 aaPredicted RBP14.6□□□□□ -0.07
BRCC3-204ENST00000369462 AXIN2Q9Y2T1 843 aa14.6□□□□□ -0.07
BRCC3-204ENST00000369462 LTN1O94822 1766 aa14.6□□□□□ -0.07
BRCC3-204ENST00000369462 CRYBG1Q9Y4K1 1723 aa14.6□□□□□ -0.07
BRCC3-204ENST00000369462 RTL1A6NKG5 1358 aa14.6□□□□□ -0.07
BRCC3-204ENST00000369462 CPDO75976 1380 aa14.59□□□□□ -0.07
BRCC3-204ENST00000369462 NUTM2BA6NNL0 878 aaPredicted RBP14.58□□□□□ -0.08
BRCC3-204ENST00000369462 NUTM2EB1AL46 878 aaPredicted RBP14.58□□□□□ -0.08
BRCC3-204ENST00000369462 NUTM2AQ8IVF1 878 aaPredicted RBP14.58□□□□□ -0.08
BRCC3-204ENST00000369462 JCADQ9P266 1359 aa14.58□□□□□ -0.08
BRCC3-204ENST00000369462 SHPRHQ149N8 1683 aa14.57□□□□□ -0.08
BRCC3-204ENST00000369462 COL22A1Q8NFW1 1626 aaPredicted RBP14.56□□□□□ -0.08
BRCC3-204ENST00000369462 SENP3-EIF4A1A0A087X0R7 540 aa14.56□□□□□ -0.08
BRCC3-204ENST00000369462 ADAMTS2O95450 1211 aa14.56□□□□□ -0.08
BRCC3-204ENST00000369462 ABCA3Q99758 1704 aa14.56□□□□□ -0.08
BRCC3-204ENST00000369462 FAM83GA6ND36 823 aa14.56□□□□□ -0.08
BRCC3-204ENST00000369462 HMOX1P09601 288 aa14.56□□□□□ -0.08
BRCC3-204ENST00000369462 CCDC146Q8IYE0 955 aa14.56□□□□□ -0.08
BRCC3-204ENST00000369462 ANKRD24Q8TF21 1146 aa14.55□□□□□ -0.08
BRCC3-204ENST00000369462 BLMP54132 1417 aaPredicted RBP14.55□□□□□ -0.08
BRCC3-204ENST00000369462 HNRNPUQ00839 825 aaKnown RBP eCLIP14.55□□□□□ -0.08
BRCC3-204ENST00000369462 EYA1Q99502 592 aa14.55□□□□□ -0.08
BRCC3-204ENST00000369462 SULT6B1Q6IMI4 303 aa14.54□□□□□ -0.08
BRCC3-204ENST00000369462 ERBB3P21860 1342 aa14.54□□□□□ -0.08
BRCC3-204ENST00000369462 AEBP1Q8IUX7 1158 aa14.53□□□□□ -0.08
BRCC3-204ENST00000369462 FCHSD2O94868 740 aa14.52□□□□□ -0.08
BRCC3-204ENST00000369462 NBPF6Q5VWK0 638 aa14.52□□□□□ -0.08
BRCC3-204ENST00000369462 NBPF4Q96M43 638 aa14.52□□□□□ -0.08
BRCC3-204ENST00000369462 CSB-PGBD3P0DP91 1061 aa14.52□□□□□ -0.09
BRCC3-204ENST00000369462 COL18A1P39060 1754 aa14.52□□□□□ -0.09
BRCC3-204ENST00000369462 USHBP1Q8N6Y0 703 aa14.51□□□□□ -0.09
BRCC3-204ENST00000369462 BTG4Q9NY30 223 aa14.51□□□□□ -0.09
BRCC3-204ENST00000369462 IGSF1Q8N6C5 1336 aa14.51□□□□□ -0.09
BRCC3-204ENST00000369462 CAMTA1Q9Y6Y1 1673 aa14.51□□□□□ -0.09
BRCC3-204ENST00000369462 RGPD5Q99666 1765 aa14.51□□□□□ -0.09
BRCC3-204ENST00000369462 PRKAR2BP31323 418 aa14.51□□□□□ -0.09
BRCC3-204ENST00000369462 RSPH6AQ9H0K4 717 aa14.51□□□□□ -0.09
BRCC3-204ENST00000369462 SPATA31A6Q5VVP1 1343 aa14.51□□□□□ -0.09
BRCC3-204ENST00000369462 RUNDC1Q96C34 613 aa14.51□□□□□ -0.09
BRCC3-204ENST00000369462 NLRP2Q9NX02 1062 aa14.51□□□□□ -0.09
BRCC3-204ENST00000369462 PNNQ9H307 717 aaKnown RBP14.5□□□□□ -0.09
BRCC3-204ENST00000369462 STRN4Q9NRL3 753 aa14.5□□□□□ -0.09
BRCC3-204ENST00000369462 SALL2Q9Y467 1007 aaPredicted RBP14.5□□□□□ -0.09
BRCC3-204ENST00000369462 ABCC6O95255 1503 aa14.5□□□□□ -0.09
BRCC3-204ENST00000369462 APAF1O14727 1248 aa14.5□□□□□ -0.09
BRCC3-204ENST00000369462 EVA1CP58658 441 aa14.5□□□□□ -0.09
BRCC3-204ENST00000369462 PLEKHF1Q96S99 279 aa14.5□□□□□ -0.09
BRCC3-204ENST00000369462 FBXO41Q8TF61 875 aa14.49□□□□□ -0.09
BRCC3-204ENST00000369462 MAPK8IP3Q9UPT6 1336 aa14.48□□□□□ -0.09
BRCC3-204ENST00000369462 COL5A2P05997 1499 aaPredicted RBP14.48□□□□□ -0.09
BRCC3-204ENST00000369462 LMO7Q8WWI1 1683 aa14.48□□□□□ -0.09
BRCC3-204ENST00000369462 NEFMP07197 916 aa14.48□□□□□ -0.09
BRCC3-204ENST00000369462 TCP11L2Q8N4U5 519 aa14.48□□□□□ -0.09
BRCC3-204ENST00000369462 RGPD1P0DJD0 1748 aa14.48□□□□□ -0.09
BRCC3-204ENST00000369462 KDRP35968 1356 aa14.48□□□□□ -0.09
BRCC3-204ENST00000369462 WDR17Q8IZU2 1322 aa14.48□□□□□ -0.09
BRCC3-204ENST00000369462 TOM1L2Q6ZVM7 507 aa14.47□□□□□ -0.09
BRCC3-204ENST00000369462 PHACTR3Q96KR7 559 aa14.47□□□□□ -0.09
BRCC3-204ENST00000369462 C8orf37Q96NL8 207 aa14.47□□□□□ -0.09
BRCC3-204ENST00000369462 NEUROD2Q15784 382 aa14.47□□□□□ -0.09
BRCC3-204ENST00000369462 LARP1Q6PKG0 1096 aaKnown RBP14.47□□□□□ -0.09
BRCC3-204ENST00000369462 NGLY1Q96IV0 654 aa14.47□□□□□ -0.09
BRCC3-204ENST00000369462 RRP7AQ9Y3A4 280 aaKnown RBP14.47□□□□□ -0.09
BRCC3-204ENST00000369462 COL14A1Q05707 1796 aaKnown RBP14.46□□□□□ -0.09
BRCC3-204ENST00000369462 LRP6O75581 1613 aa14.46□□□□□ -0.1
BRCC3-204ENST00000369462 RGPD2P0DJD1 1756 aa14.45□□□□□ -0.1
BRCC3-204ENST00000369462 MEX3CQ5U5Q3 659 aaKnown RBP14.45□□□□□ -0.1
BRCC3-204ENST00000369462 USP35Q9P2H5 1018 aa14.44□□□□□ -0.1
BRCC3-204ENST00000369462 TMPOP42166 694 aaKnown RBP14.43□□□□□ -0.1
BRCC3-204ENST00000369462 ZBED9Q6R2W3 1325 aa14.43□□□□□ -0.1
BRCC3-204ENST00000369462 NCAPD2Q15021 1401 aa14.42□□□□□ -0.1
BRCC3-204ENST00000369462 CARD10Q9BWT7 1032 aa14.42□□□□□ -0.1
BRCC3-204ENST00000369462 RAPGEF4Q8WZA2 1011 aa14.42□□□□□ -0.1
BRCC3-204ENST00000369462 SLIT2O94813 1529 aa14.42□□□□□ -0.1
BRCC3-204ENST00000369462 RIPK4P57078 832 aa14.42□□□□□ -0.1
BRCC3-204ENST00000369462 CRB1P82279 1406 aa14.41□□□□□ -0.1
BRCC3-204ENST00000369462 NFE2L2Q16236 605 aa14.41□□□□□ -0.1
BRCC3-204ENST00000369462 FNBP4Q8N3X1 1017 aaPredicted RBP14.41□□□□□ -0.1
BRCC3-204ENST00000369462 MTHFSDQ2M296 383 aaKnown RBP14.41□□□□□ -0.1
BRCC3-204ENST00000369462 PLCH1Q4KWH8 1693 aa14.41□□□□□ -0.1
BRCC3-204ENST00000369462 UNC5CLQ8IV45 518 aa14.4□□□□□ -0.1
BRCC3-204ENST00000369462 FAM208AQ9UK61 1670 aaKnown RBP14.4□□□□□ -0.1
BRCC3-204ENST00000369462 NGEFQ8N5V2 710 aa14.4□□□□□ -0.1
BRCC3-204ENST00000369462 TATP17735 454 aaPredicted RBP14.39□□□□□ -0.11
BRCC3-204ENST00000369462 USP21Q9UK80 565 aa14.39□□□□□ -0.11
BRCC3-204ENST00000369462 CCDC9Q9Y3X0 531 aaKnown RBP14.39□□□□□ -0.11
BRCC3-204ENST00000369462 BCL9LQ86UU0 1499 aa14.39□□□□□ -0.11
BRCC3-204ENST00000369462 WWC1Q8IX03 1113 aa14.38□□□□□ -0.11
BRCC3-204ENST00000369462 PLEKHO1Q53GL0 409 aaPredicted RBP14.38□□□□□ -0.11
BRCC3-204ENST00000369462 GAS2L2Q8NHY3 880 aa14.38□□□□□ -0.11
BRCC3-204ENST00000369462 AFF2P51816 1311 aa14.38□□□□□ -0.11
BRCC3-204ENST00000369462 ZBTB22O15209 634 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms