RNA–Protein interactions for RNA: ENST00000369063.7

RTN4IP1-201, Transcript of reticulon 4 interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4IP1, Length 1,682 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-201ENST00000369063 COL18A1P39060 1754 aa21■□□□□ 0.95
RTN4IP1-201ENST00000369063 PER1O15534 1290 aaPredicted RBP20.99■□□□□ 0.95
RTN4IP1-201ENST00000369063 COL5A2P05997 1499 aaPredicted RBP20.99■□□□□ 0.95
RTN4IP1-201ENST00000369063 SPATA31A5Q5VU36 1347 aa20.99■□□□□ 0.95
RTN4IP1-201ENST00000369063 SPATA31A7Q8IWB4 1347 aa20.99■□□□□ 0.95
RTN4IP1-201ENST00000369063 LARP1Q6PKG0 1096 aaKnown RBP20.98■□□□□ 0.95
RTN4IP1-201ENST00000369063 GLI3P10071 1580 aa20.98■□□□□ 0.95
RTN4IP1-201ENST00000369063 ONECUT3O60422 494 aaPredicted RBP20.97■□□□□ 0.95
RTN4IP1-201ENST00000369063 ABCC6O95255 1503 aa20.96■□□□□ 0.95
RTN4IP1-201ENST00000369063 MAP3K19Q56UN5 1328 aa20.96■□□□□ 0.95
RTN4IP1-201ENST00000369063 SPATA31A1Q5TZJ5 1347 aa20.96■□□□□ 0.95
RTN4IP1-201ENST00000369063 LTN1O94822 1766 aa20.95■□□□□ 0.94
RTN4IP1-201ENST00000369063 RGS12O14924 1447 aa20.95■□□□□ 0.94
RTN4IP1-201ENST00000369063 NSD2O96028 1365 aa20.95■□□□□ 0.94
RTN4IP1-201ENST00000369063 RRS1Q15050 365 aaKnown RBP20.95■□□□□ 0.94
RTN4IP1-201ENST00000369063 AMER1Q5JTC6 1135 aaPredicted RBP20.95■□□□□ 0.94
RTN4IP1-201ENST00000369063 IP6K1Q92551 441 aa20.95■□□□□ 0.94
RTN4IP1-201ENST00000369063 WDR17Q8IZU2 1322 aa20.93■□□□□ 0.94
RTN4IP1-201ENST00000369063 USP35Q9P2H5 1018 aa20.93■□□□□ 0.94
RTN4IP1-201ENST00000369063 AMPHP49418 695 aa20.93■□□□□ 0.94
RTN4IP1-201ENST00000369063 CRB1P82279 1406 aa20.92■□□□□ 0.94
RTN4IP1-201ENST00000369063 FAM98CQ17RN3 349 aaKnown RBP20.92■□□□□ 0.94
RTN4IP1-201ENST00000369063 TOM1L2Q6ZVM7 507 aa20.92■□□□□ 0.94
RTN4IP1-201ENST00000369063 BLMP54132 1417 aaPredicted RBP20.92■□□□□ 0.94
RTN4IP1-201ENST00000369063 ERBB3P21860 1342 aa20.91■□□□□ 0.94
RTN4IP1-201ENST00000369063 HOXC9P31274 260 aa20.91■□□□□ 0.94
RTN4IP1-201ENST00000369063 RGPD5Q99666 1765 aa20.91■□□□□ 0.94
RTN4IP1-201ENST00000369063 CSB-PGBD3P0DP91 1061 aa20.9■□□□□ 0.94
RTN4IP1-201ENST00000369063 SEPT12Q8IYM1 358 aa20.9■□□□□ 0.94
RTN4IP1-201ENST00000369063 TCP11L2Q8N4U5 519 aa20.9■□□□□ 0.94
RTN4IP1-201ENST00000369063 THRAP3Q9Y2W1 955 aaKnown RBP20.9■□□□□ 0.94
RTN4IP1-201ENST00000369063 SOCS7O14512 581 aa20.89■□□□□ 0.94
RTN4IP1-201ENST00000369063 BARGINQ6ZT62 677 aa20.89■□□□□ 0.94
RTN4IP1-201ENST00000369063 RTL1A6NKG5 1358 aa20.89■□□□□ 0.94
RTN4IP1-201ENST00000369063 KIF24Q5T7B8 1368 aa20.89■□□□□ 0.94
RTN4IP1-201ENST00000369063 MORC1Q86VD1 984 aa20.89■□□□□ 0.93
RTN4IP1-201ENST00000369063 ANKRD24Q8TF21 1146 aa20.89■□□□□ 0.93
RTN4IP1-201ENST00000369063 ANKRD26Q9UPS8 1709 aa20.88■□□□□ 0.93
RTN4IP1-201ENST00000369063 TNNT2P45379 298 aaPredicted RBP20.88■□□□□ 0.93
RTN4IP1-201ENST00000369063 EMILIN1Q9Y6C2 1016 aa20.88■□□□□ 0.93
RTN4IP1-201ENST00000369063 CARD10Q9BWT7 1032 aa20.87■□□□□ 0.93
RTN4IP1-201ENST00000369063 NPC1L1Q9UHC9 1359 aa20.86■□□□□ 0.93
RTN4IP1-201ENST00000369063 POLKQ9UBT6 870 aa20.86■□□□□ 0.93
RTN4IP1-201ENST00000369063 FLT4P35916 1363 aa20.86■□□□□ 0.93
RTN4IP1-201ENST00000369063 A0A0G2JS52 829 aa20.86■□□□□ 0.93
RTN4IP1-201ENST00000369063 MYT1Q01538 1121 aa20.86■□□□□ 0.93
RTN4IP1-201ENST00000369063 HSP90AB2PQ58FF8 381 aa20.86■□□□□ 0.93
RTN4IP1-201ENST00000369063 CC2D1BQ5T0F9 858 aaKnown RBP20.86■□□□□ 0.93
RTN4IP1-201ENST00000369063 EP400Q96L91 3159 aa20.84■□□□□ 0.93
RTN4IP1-201ENST00000369063 PPM1GO15355 546 aaPredicted RBP20.84■□□□□ 0.93
RTN4IP1-201ENST00000369063 LTV1Q96GA3 475 aaPredicted RBP20.84■□□□□ 0.93
RTN4IP1-201ENST00000369063 NLRP2Q9NX02 1062 aa20.84■□□□□ 0.93
RTN4IP1-201ENST00000369063 INSRP06213 1382 aa20.84■□□□□ 0.93
RTN4IP1-201ENST00000369063 PEAK1Q9H792 1746 aa20.83■□□□□ 0.92
RTN4IP1-201ENST00000369063 MAP2P11137 1827 aaKnown RBP20.83■□□□□ 0.92
RTN4IP1-201ENST00000369063 THSD7AQ9UPZ6 1657 aa20.82■□□□□ 0.92
RTN4IP1-201ENST00000369063 KRT27Q7Z3Y8 459 aa20.81■□□□□ 0.92
RTN4IP1-201ENST00000369063 CDCA7Q9BWT1 371 aaPredicted RBP20.8■□□□□ 0.92
RTN4IP1-201ENST00000369063 BRWD3Q6RI45 1802 aa20.79■□□□□ 0.92
RTN4IP1-201ENST00000369063 DDX10Q13206 875 aaKnown RBP20.78■□□□□ 0.92
RTN4IP1-201ENST00000369063 SMG6Q86US8 1419 aaKnown RBP20.78■□□□□ 0.92
RTN4IP1-201ENST00000369063 CNGB1Q14028 1251 aaPredicted RBP20.77■□□□□ 0.92
RTN4IP1-201ENST00000369063 NBPF6Q5VWK0 638 aa20.77■□□□□ 0.92
RTN4IP1-201ENST00000369063 NBPF4Q96M43 638 aa20.77■□□□□ 0.92
RTN4IP1-201ENST00000369063 FAM208AQ9UK61 1670 aaKnown RBP20.76■□□□□ 0.91
RTN4IP1-201ENST00000369063 DISP2A7MBM2 1401 aa20.76■□□□□ 0.91
RTN4IP1-201ENST00000369063 IL2RBP14784 551 aa20.75■□□□□ 0.91
RTN4IP1-201ENST00000369063 PDE3BQ13370 1112 aa20.75■□□□□ 0.91
RTN4IP1-201ENST00000369063 DDB1Q16531 1140 aa20.75■□□□□ 0.91
RTN4IP1-201ENST00000369063 UPF1Q92900 1129 aaKnown RBP eCLIP20.74■□□□□ 0.91
RTN4IP1-201ENST00000369063 PARP4Q9UKK3 1724 aaKnown RBP20.74■□□□□ 0.91
RTN4IP1-201ENST00000369063 MTHFSP49914 203 aa20.73■□□□□ 0.91
RTN4IP1-201ENST00000369063 ZNF316A6NFI3 1004 aaPredicted RBP20.73■□□□□ 0.91
RTN4IP1-201ENST00000369063 EIF4A2Q14240 407 aaKnown RBP20.72■□□□□ 0.91
RTN4IP1-201ENST00000369063 FAM182BQ5T319 152 aa20.72■□□□□ 0.91
RTN4IP1-201ENST00000369063 EXOC5O00471 708 aa20.71■□□□□ 0.91
RTN4IP1-201ENST00000369063 RGPD2P0DJD1 1756 aa20.71■□□□□ 0.91
RTN4IP1-201ENST00000369063 WNK3Q9BYP7 1800 aa20.71■□□□□ 0.91
RTN4IP1-201ENST00000369063 USHBP1Q8N6Y0 703 aa20.7■□□□□ 0.91
RTN4IP1-201ENST00000369063 EYA1Q99502 592 aa20.7■□□□□ 0.9
RTN4IP1-201ENST00000369063 LRRC37A3O60309 1634 aa20.69■□□□□ 0.9
RTN4IP1-201ENST00000369063 FAM196AQ6ZSG2 479 aa20.69■□□□□ 0.9
RTN4IP1-201ENST00000369063 CCDC125Q86Z20 511 aa20.67■□□□□ 0.9
RTN4IP1-201ENST00000369063 MARCH10Q8NA82 808 aaPredicted RBP20.67■□□□□ 0.9
RTN4IP1-201ENST00000369063 NCAPD2Q15021 1401 aa20.66■□□□□ 0.9
RTN4IP1-201ENST00000369063 RAPGEF4Q8WZA2 1011 aa20.66■□□□□ 0.9
RTN4IP1-201ENST00000369063 TNS2Q63HR2 1409 aa20.66■□□□□ 0.9
RTN4IP1-201ENST00000369063 PARD3Q8TEW0 1356 aa20.65■□□□□ 0.9
RTN4IP1-201ENST00000369063 MEGF6O75095 1541 aa20.65■□□□□ 0.9
RTN4IP1-201ENST00000369063 PPP2R1AP30153 589 aa20.65■□□□□ 0.9
RTN4IP1-201ENST00000369063 IL13P35225 146 aa20.65■□□□□ 0.9
RTN4IP1-201ENST00000369063 IGSF1Q8N6C5 1336 aa20.64■□□□□ 0.89
RTN4IP1-201ENST00000369063 OVOS2A0A0G2JMS6 1433 aa20.63■□□□□ 0.89
RTN4IP1-201ENST00000369063 TATP17735 454 aaPredicted RBP20.63■□□□□ 0.89
RTN4IP1-201ENST00000369063 ZCRB1Q8TBF4 217 aaKnown RBP20.62■□□□□ 0.89
RTN4IP1-201ENST00000369063 DIAPH1O60610 1272 aaKnown RBP20.61■□□□□ 0.89
RTN4IP1-201ENST00000369063 BCL9O00512 1426 aa20.61■□□□□ 0.89
RTN4IP1-201ENST00000369063 RALBP1Q15311 655 aa20.61■□□□□ 0.89
RTN4IP1-201ENST00000369063 DDX54Q8TDD1 881 aaKnown RBP20.6■□□□□ 0.89
RTN4IP1-201ENST00000369063 TRIM37O94972 964 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms