RNA–Protein interactions for RNA: ENST00000368914.7

SEMA6C-204, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-204ENST00000368914 QRICH2Q9H0J4 1663 aa18.25■□□□□ 0.51
SEMA6C-204ENST00000368914 TTC21AQ8NDW8 1320 aa18.25■□□□□ 0.51
SEMA6C-204ENST00000368914 HOXC9P31274 260 aa18.25■□□□□ 0.51
SEMA6C-204ENST00000368914 ERICH6Q7L0X2 663 aa18.25■□□□□ 0.51
SEMA6C-204ENST00000368914 NSD2O96028 1365 aa18.25■□□□□ 0.51
SEMA6C-204ENST00000368914 MEX3CQ5U5Q3 659 aaKnown RBP18.24■□□□□ 0.51
SEMA6C-204ENST00000368914 FAM135BQ49AJ0 1406 aa18.24■□□□□ 0.51
SEMA6C-204ENST00000368914 C3P01024 1663 aa18.24■□□□□ 0.51
SEMA6C-204ENST00000368914 DUSP27Q5VZP5 1158 aa18.24■□□□□ 0.51
SEMA6C-204ENST00000368914 IL13P35225 146 aa18.24■□□□□ 0.51
SEMA6C-204ENST00000368914 CALD1Q05682 793 aaKnown RBP18.24■□□□□ 0.51
SEMA6C-204ENST00000368914 REREQ9P2R6 1566 aa18.23■□□□□ 0.51
SEMA6C-204ENST00000368914 SKAP1Q86WV1 359 aa18.23■□□□□ 0.51
SEMA6C-204ENST00000368914 POLR3AO14802 1390 aaPredicted RBP18.22■□□□□ 0.51
SEMA6C-204ENST00000368914 MTHFSDQ2M296 383 aaKnown RBP18.22■□□□□ 0.51
SEMA6C-204ENST00000368914 NBPF6Q5VWK0 638 aa18.22■□□□□ 0.51
SEMA6C-204ENST00000368914 NBPF4Q96M43 638 aa18.22■□□□□ 0.51
SEMA6C-204ENST00000368914 GNAI1P63096 354 aa18.21■□□□□ 0.5
SEMA6C-204ENST00000368914 BRINP3Q76B58 766 aa18.21■□□□□ 0.5
SEMA6C-204ENST00000368914 USP6P35125 1406 aa18.2■□□□□ 0.5
SEMA6C-204ENST00000368914 AIMP1Q12904 312 aaKnown RBP18.2■□□□□ 0.5
SEMA6C-204ENST00000368914 STK31Q9BXU1 1019 aa18.2■□□□□ 0.5
SEMA6C-204ENST00000368914 TNNQ9UQP3 1299 aa18.2■□□□□ 0.5
SEMA6C-204ENST00000368914 RSPH6AQ9H0K4 717 aa18.2■□□□□ 0.5
SEMA6C-204ENST00000368914 TATP17735 454 aaPredicted RBP18.19■□□□□ 0.5
SEMA6C-204ENST00000368914 TWISTNBQ3B726 338 aaPredicted RBP18.19■□□□□ 0.5
SEMA6C-204ENST00000368914 SETBP1Q9Y6X0 1596 aa18.19■□□□□ 0.5
SEMA6C-204ENST00000368914 PLEKHO1Q53GL0 409 aaPredicted RBP18.19■□□□□ 0.5
SEMA6C-204ENST00000368914 GAS2L2Q8NHY3 880 aa18.19■□□□□ 0.5
SEMA6C-204ENST00000368914 TOM1O60784 492 aa18.18■□□□□ 0.5
SEMA6C-204ENST00000368914 NGLY1Q96IV0 654 aa18.17■□□□□ 0.5
SEMA6C-204ENST00000368914 NPC1L1Q9UHC9 1359 aa18.17■□□□□ 0.5
SEMA6C-204ENST00000368914 FANCIQ9NVI1 1328 aa18.17■□□□□ 0.5
SEMA6C-204ENST00000368914 PTCD1O75127 700 aaKnown RBP18.17■□□□□ 0.5
SEMA6C-204ENST00000368914 ANXA1P04083 346 aa18.17■□□□□ 0.5
SEMA6C-204ENST00000368914 IQGAP1P46940 1657 aa18.16■□□□□ 0.5
SEMA6C-204ENST00000368914 TSPYL6Q8N831 410 aa18.16■□□□□ 0.5
SEMA6C-204ENST00000368914 AXIN2Q9Y2T1 843 aa18.16■□□□□ 0.5
SEMA6C-204ENST00000368914 FLT4P35916 1363 aa18.16■□□□□ 0.5
SEMA6C-204ENST00000368914 C8orf37Q96NL8 207 aa18.16■□□□□ 0.5
SEMA6C-204ENST00000368914 NOB1Q9ULX3 412 aaKnown RBP18.16■□□□□ 0.5
SEMA6C-204ENST00000368914 GNAT3A8MTJ3 354 aa18.15■□□□□ 0.5
SEMA6C-204ENST00000368914 SMG6Q86US8 1419 aaKnown RBP18.15■□□□□ 0.5
SEMA6C-204ENST00000368914 ZKSCAN2Q63HK3 967 aa18.15■□□□□ 0.5
SEMA6C-204ENST00000368914 SSH1Q8WYL5 1049 aa18.15■□□□□ 0.5
SEMA6C-204ENST00000368914 C1orf115Q9H7X2 142 aa18.15■□□□□ 0.5
SEMA6C-204ENST00000368914 BTG4Q9NY30 223 aa18.15■□□□□ 0.5
SEMA6C-204ENST00000368914 SLC39A6Q13433 755 aa18.15■□□□□ 0.5
SEMA6C-204ENST00000368914 IP6K1Q92551 441 aa18.15■□□□□ 0.5
SEMA6C-204ENST00000368914 WDR63Q8IWG1 891 aa18.14■□□□□ 0.49
SEMA6C-204ENST00000368914 IPO8O15397 1037 aaKnown RBP18.14■□□□□ 0.49
SEMA6C-204ENST00000368914 FKBP5Q13451 457 aaPredicted RBP18.14■□□□□ 0.49
SEMA6C-204ENST00000368914 MBIPQ9NS73 344 aa18.14■□□□□ 0.49
SEMA6C-204ENST00000368914 PIP4K2AP48426 406 aaPredicted RBP18.14■□□□□ 0.49
SEMA6C-204ENST00000368914 TRIM35Q9UPQ4 493 aa18.14■□□□□ 0.49
SEMA6C-204ENST00000368914 PIK3R4Q99570 1358 aa18.14■□□□□ 0.49
SEMA6C-204ENST00000368914 SLC4A2P04920 1241 aa18.13■□□□□ 0.49
SEMA6C-204ENST00000368914 TTC5Q8N0Z6 440 aa18.13■□□□□ 0.49
SEMA6C-204ENST00000368914 LGR6Q9HBX8 967 aa18.12■□□□□ 0.49
SEMA6C-204ENST00000368914 CPS1P31327 1500 aa18.12■□□□□ 0.49
SEMA6C-204ENST00000368914 ATP7BP35670 1465 aa18.12■□□□□ 0.49
SEMA6C-204ENST00000368914 RTL5Q5HYW3 569 aaPredicted RBP18.12■□□□□ 0.49
SEMA6C-204ENST00000368914 UBR1Q8IWV7 1749 aa18.12■□□□□ 0.49
SEMA6C-204ENST00000368914 C8orf58Q8NAV2 365 aa18.11■□□□□ 0.49
SEMA6C-204ENST00000368914 RBM42Q9BTD8 480 aaKnown RBP18.11■□□□□ 0.49
SEMA6C-204ENST00000368914 ADGRL3Q9HAR2 1447 aa18.11■□□□□ 0.49
SEMA6C-204ENST00000368914 DZIP1LQ8IYY4 767 aaKnown RBP18.11■□□□□ 0.49
SEMA6C-204ENST00000368914 BTBD11A6QL63 1104 aa18.1■□□□□ 0.49
SEMA6C-204ENST00000368914 MYL6BP14649 208 aa18.1■□□□□ 0.49
SEMA6C-204ENST00000368914 RARSP54136 660 aaKnown RBP18.1■□□□□ 0.49
SEMA6C-204ENST00000368914 KIAA0232Q92628 1395 aa18.09■□□□□ 0.49
SEMA6C-204ENST00000368914 F6X3S4 739 aa18.08■□□□□ 0.48
SEMA6C-204ENST00000368914 CABP4P57796 275 aa18.08■□□□□ 0.48
SEMA6C-204ENST00000368914 HDGFL1Q5TGJ6 251 aa18.08■□□□□ 0.48
SEMA6C-204ENST00000368914 ARHGAP23Q9P227 1491 aa18.08■□□□□ 0.48
SEMA6C-204ENST00000368914 ARHGEF28Q8N1W1 1705 aaKnown RBP18.07■□□□□ 0.48
SEMA6C-204ENST00000368914 ARHGEF25Q86VW2 580 aa18.07■□□□□ 0.48
SEMA6C-204ENST00000368914 MYO3AQ8NEV4 1616 aa18.07■□□□□ 0.48
SEMA6C-204ENST00000368914 SBNO1A3KN83 1393 aa18.06■□□□□ 0.48
SEMA6C-204ENST00000368914 CPSF1Q10570 1443 aaKnown RBP18.06■□□□□ 0.48
SEMA6C-204ENST00000368914 LARP1Q6PKG0 1096 aaKnown RBP18.06■□□□□ 0.48
SEMA6C-204ENST00000368914 PLEKHF1Q96S99 279 aa18.06■□□□□ 0.48
SEMA6C-204ENST00000368914 SPG7Q9UQ90 795 aa18.06■□□□□ 0.48
SEMA6C-204ENST00000368914 NFATC2IPQ8NCF5 419 aa18.05■□□□□ 0.48
SEMA6C-204ENST00000368914 SLIT1O75093 1534 aa18.05■□□□□ 0.48
SEMA6C-204ENST00000368914 ACSBG1Q96GR2 724 aa18.05■□□□□ 0.48
SEMA6C-204ENST00000368914 KIAA1210Q9ULL0 1709 aa18.05■□□□□ 0.48
SEMA6C-204ENST00000368914 LAMC1P11047 1609 aa18.04■□□□□ 0.48
SEMA6C-204ENST00000368914 C1orf167Q5SNV9 1468 aa18.04■□□□□ 0.48
SEMA6C-204ENST00000368914 TECPR2O15040 1411 aa18.04■□□□□ 0.48
SEMA6C-204ENST00000368914 CFAP44Q96MT7 982 aa18.04■□□□□ 0.48
SEMA6C-204ENST00000368914 CD163L1Q9NR16 1453 aa18.03■□□□□ 0.48
SEMA6C-204ENST00000368914 PTCH1Q13635 1447 aa18.03■□□□□ 0.48
SEMA6C-204ENST00000368914 NKTRP30414 1462 aaKnown RBP18.03■□□□□ 0.48
SEMA6C-204ENST00000368914 TAF7Q15545 349 aaPredicted RBP18.03■□□□□ 0.48
SEMA6C-204ENST00000368914 DAXXQ9UER7 740 aaPredicted RBP18.03■□□□□ 0.48
SEMA6C-204ENST00000368914 FAM177BA6PVY3 158 aa18.03■□□□□ 0.48
SEMA6C-204ENST00000368914 FAM182BQ5T319 152 aa18.03■□□□□ 0.48
SEMA6C-204ENST00000368914 KCNQ3O43525 872 aa18.02■□□□□ 0.48
SEMA6C-204ENST00000368914 CHMP3Q9Y3E7 222 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms