RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 CCDC146Q8IYE0 955 aa21.11■□□□□ 0.97
LMNA-203ENST00000368297 SENP3-EIF4A1A0A087X0R7 540 aa21.1■□□□□ 0.97
LMNA-203ENST00000368297 HOXC9P31274 260 aa21.1■□□□□ 0.97
LMNA-203ENST00000368297 LRRC59Q96AG4 307 aaKnown RBP21.1■□□□□ 0.97
LMNA-203ENST00000368297 HAP1P54257 671 aaPredicted RBP21.09■□□□□ 0.97
LMNA-203ENST00000368297 ZC3H6P61129 1189 aaKnown RBP21.09■□□□□ 0.97
LMNA-203ENST00000368297 EIF4A2Q14240 407 aaKnown RBP21.09■□□□□ 0.97
LMNA-203ENST00000368297 ARHGEF25Q86VW2 580 aa21.09■□□□□ 0.97
LMNA-203ENST00000368297 IP6K1Q92551 441 aa21.07■□□□□ 0.96
LMNA-203ENST00000368297 ABCA3Q99758 1704 aa21.06■□□□□ 0.96
LMNA-203ENST00000368297 LTV1Q96GA3 475 aaPredicted RBP21.05■□□□□ 0.96
LMNA-203ENST00000368297 COL16A1Q07092 1604 aaPredicted RBP21.05■□□□□ 0.96
LMNA-203ENST00000368297 RUNDC1Q96C34 613 aa21.05■□□□□ 0.96
LMNA-203ENST00000368297 ZBED9Q6R2W3 1325 aa21.04■□□□□ 0.96
LMNA-203ENST00000368297 PNNQ9H307 717 aaKnown RBP21.04■□□□□ 0.96
LMNA-203ENST00000368297 SALL2Q9Y467 1007 aaPredicted RBP21.04■□□□□ 0.96
LMNA-203ENST00000368297 HMOX1P09601 288 aa21.03■□□□□ 0.96
LMNA-203ENST00000368297 APAF1O14727 1248 aa21.02■□□□□ 0.95
LMNA-203ENST00000368297 FCHSD2O94868 740 aa21.02■□□□□ 0.95
LMNA-203ENST00000368297 MAPK8IP3Q9UPT6 1336 aa21.01■□□□□ 0.95
LMNA-203ENST00000368297 KIAA0232Q92628 1395 aa21.01■□□□□ 0.95
LMNA-203ENST00000368297 COL22A1Q8NFW1 1626 aaPredicted RBP21.01■□□□□ 0.95
LMNA-203ENST00000368297 RGPD1P0DJD0 1748 aa21.01■□□□□ 0.95
LMNA-203ENST00000368297 NEFMP07197 916 aa21■□□□□ 0.95
LMNA-203ENST00000368297 RSPH6AQ9H0K4 717 aa21■□□□□ 0.95
LMNA-203ENST00000368297 CPDO75976 1380 aa21■□□□□ 0.95
LMNA-203ENST00000368297 RGPD5Q99666 1765 aa21■□□□□ 0.95
LMNA-203ENST00000368297 CHRNA2Q15822 529 aa20.99■□□□□ 0.95
LMNA-203ENST00000368297 PRKAR2BP31323 418 aa20.99■□□□□ 0.95
LMNA-203ENST00000368297 SULT6B1Q6IMI4 303 aa20.99■□□□□ 0.95
LMNA-203ENST00000368297 PRDM11Q9NQV5 511 aa20.99■□□□□ 0.95
LMNA-203ENST00000368297 ANKRD24Q8TF21 1146 aa20.98■□□□□ 0.95
LMNA-203ENST00000368297 EYA1Q99502 592 aa20.98■□□□□ 0.95
LMNA-203ENST00000368297 ABCC6O95255 1503 aa20.98■□□□□ 0.95
LMNA-203ENST00000368297 COL18A1P39060 1754 aa20.97■□□□□ 0.95
LMNA-203ENST00000368297 TCP11L2Q8N4U5 519 aa20.97■□□□□ 0.95
LMNA-203ENST00000368297 PLEKHF1Q96S99 279 aa20.97■□□□□ 0.95
LMNA-203ENST00000368297 AXIN2Q9Y2T1 843 aa20.97■□□□□ 0.95
LMNA-203ENST00000368297 AEBP1Q8IUX7 1158 aa20.96■□□□□ 0.95
LMNA-203ENST00000368297 IGSF1Q8N6C5 1336 aa20.96■□□□□ 0.95
LMNA-203ENST00000368297 NEUROD2Q15784 382 aa20.95■□□□□ 0.94
LMNA-203ENST00000368297 RRP7AQ9Y3A4 280 aaKnown RBP20.95■□□□□ 0.94
LMNA-203ENST00000368297 RGPD2P0DJD1 1756 aa20.94■□□□□ 0.94
LMNA-203ENST00000368297 NGEFQ8N5V2 710 aa20.93■□□□□ 0.94
LMNA-203ENST00000368297 CSB-PGBD3P0DP91 1061 aa20.92■□□□□ 0.94
LMNA-203ENST00000368297 USHBP1Q8N6Y0 703 aa20.92■□□□□ 0.94
LMNA-203ENST00000368297 ERBB3P21860 1342 aa20.91■□□□□ 0.94
LMNA-203ENST00000368297 NBPF6Q5VWK0 638 aa20.91■□□□□ 0.94
LMNA-203ENST00000368297 NBPF4Q96M43 638 aa20.91■□□□□ 0.94
LMNA-203ENST00000368297 KDRP35968 1356 aa20.91■□□□□ 0.94
LMNA-203ENST00000368297 LMO7Q8WWI1 1683 aa20.91■□□□□ 0.94
LMNA-203ENST00000368297 TMPOP42166 694 aaKnown RBP20.9■□□□□ 0.94
LMNA-203ENST00000368297 PHACTR3Q96KR7 559 aa20.9■□□□□ 0.94
LMNA-203ENST00000368297 FAM208AQ9UK61 1670 aaKnown RBP20.9■□□□□ 0.94
LMNA-203ENST00000368297 NUTM2BA6NNL0 878 aaPredicted RBP20.89■□□□□ 0.94
LMNA-203ENST00000368297 NUTM2EB1AL46 878 aaPredicted RBP20.89■□□□□ 0.94
LMNA-203ENST00000368297 NUTM2AQ8IVF1 878 aaPredicted RBP20.89■□□□□ 0.94
LMNA-203ENST00000368297 JCADQ9P266 1359 aa20.89■□□□□ 0.94
LMNA-203ENST00000368297 NLRP2Q9NX02 1062 aa20.89■□□□□ 0.93
LMNA-203ENST00000368297 CAMTA1Q9Y6Y1 1673 aa20.88■□□□□ 0.93
LMNA-203ENST00000368297 COL14A1Q05707 1796 aaKnown RBP20.88■□□□□ 0.93
LMNA-203ENST00000368297 FAM83GA6ND36 823 aa20.88■□□□□ 0.93
LMNA-203ENST00000368297 RIPK4P57078 832 aa20.87■□□□□ 0.93
LMNA-203ENST00000368297 PDE3BQ13370 1112 aa20.87■□□□□ 0.93
LMNA-203ENST00000368297 NFE2L2Q16236 605 aa20.87■□□□□ 0.93
LMNA-203ENST00000368297 ADAMTS2O95450 1211 aa20.86■□□□□ 0.93
LMNA-203ENST00000368297 HSPA1LP34931 641 aa20.86■□□□□ 0.93
LMNA-203ENST00000368297 NCBP3Q53F19 620 aaKnown RBP20.86■□□□□ 0.93
LMNA-203ENST00000368297 COL5A2P05997 1499 aaPredicted RBP20.85■□□□□ 0.93
LMNA-203ENST00000368297 EVA1CP58658 441 aa20.85■□□□□ 0.93
LMNA-203ENST00000368297 WWC1Q8IX03 1113 aa20.85■□□□□ 0.93
LMNA-203ENST00000368297 ZNF521Q96K83 1311 aa20.85■□□□□ 0.93
LMNA-203ENST00000368297 CCDC27Q2M243 656 aa20.84■□□□□ 0.93
LMNA-203ENST00000368297 NEFLP07196 543 aa20.83■□□□□ 0.93
LMNA-203ENST00000368297 GOLGA2Q08379 1002 aa20.83■□□□□ 0.93
LMNA-203ENST00000368297 NCAPD2Q15021 1401 aa20.83■□□□□ 0.93
LMNA-203ENST00000368297 STRN4Q9NRL3 753 aa20.83■□□□□ 0.93
LMNA-203ENST00000368297 WDR17Q8IZU2 1322 aa20.83■□□□□ 0.93
LMNA-203ENST00000368297 TOM1L2Q6ZVM7 507 aa20.83■□□□□ 0.92
LMNA-203ENST00000368297 CDCA7LQ96GN5 454 aa20.83■□□□□ 0.92
LMNA-203ENST00000368297 BTG4Q9NY30 223 aa20.83■□□□□ 0.92
LMNA-203ENST00000368297 DLG5Q8TDM6 1919 aa20.82■□□□□ 0.92
LMNA-203ENST00000368297 PHF23Q9BUL5 403 aaPredicted RBP20.81■□□□□ 0.92
LMNA-203ENST00000368297 TRIM35Q9UPQ4 493 aa20.81■□□□□ 0.92
LMNA-203ENST00000368297 PLCH1Q4KWH8 1693 aa20.81■□□□□ 0.92
LMNA-203ENST00000368297 LMOD3Q0VAK6 560 aa20.8■□□□□ 0.92
LMNA-203ENST00000368297 MTHFSDQ2M296 383 aaKnown RBP20.8■□□□□ 0.92
LMNA-203ENST00000368297 GAS2L2Q8NHY3 880 aa20.8■□□□□ 0.92
LMNA-203ENST00000368297 WDR63Q8IWG1 891 aa20.8■□□□□ 0.92
LMNA-203ENST00000368297 RAPGEF4Q8WZA2 1011 aa20.79■□□□□ 0.92
LMNA-203ENST00000368297 SPATA31A6Q5VVP1 1343 aa20.79■□□□□ 0.92
LMNA-203ENST00000368297 LARP1Q6PKG0 1096 aaKnown RBP20.78■□□□□ 0.92
LMNA-203ENST00000368297 TATP17735 454 aaPredicted RBP20.77■□□□□ 0.91
LMNA-203ENST00000368297 PLEKHO1Q53GL0 409 aaPredicted RBP20.77■□□□□ 0.91
LMNA-203ENST00000368297 E9PSI1 815 aa20.76■□□□□ 0.91
LMNA-203ENST00000368297 SLFN5Q08AF3 891 aa20.76■□□□□ 0.91
LMNA-203ENST00000368297 CARD10Q9BWT7 1032 aa20.76■□□□□ 0.91
LMNA-203ENST00000368297 CRB1P82279 1406 aa20.75■□□□□ 0.91
LMNA-203ENST00000368297 AMOTQ4VCS5 1084 aa20.75■□□□□ 0.91
LMNA-203ENST00000368297 RTF1Q92541 710 aaKnown RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms