RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 ILDR2Q71H61 639 aa15.98■□□□□ 0.15
USF1-203ENST00000368021 ALS2Q96Q42 1657 aa15.98■□□□□ 0.15
USF1-203ENST00000368021 SOX12O15370 315 aa15.97■□□□□ 0.15
USF1-203ENST00000368021 ZC3H6P61129 1189 aaKnown RBP15.97■□□□□ 0.15
USF1-203ENST00000368021 NGEFQ8N5V2 710 aa15.97■□□□□ 0.15
USF1-203ENST00000368021 DIAPH1O60610 1272 aaKnown RBP15.96■□□□□ 0.15
USF1-203ENST00000368021 EMILIN1Q9Y6C2 1016 aa15.96■□□□□ 0.15
USF1-203ENST00000368021 MARF1Q9Y4F3 1742 aaKnown RBP15.96■□□□□ 0.15
USF1-203ENST00000368021 FAM83GA6ND36 823 aa15.96■□□□□ 0.14
USF1-203ENST00000368021 FBLN1P23142 703 aa15.96■□□□□ 0.14
USF1-203ENST00000368021 USP21Q9UK80 565 aa15.96■□□□□ 0.14
USF1-203ENST00000368021 PDE3BQ13370 1112 aa15.95■□□□□ 0.14
USF1-203ENST00000368021 ZNF772Q68DY9 489 aaPredicted RBP15.95■□□□□ 0.14
USF1-203ENST00000368021 ZBTB7CA1YPR0 619 aa15.94■□□□□ 0.14
USF1-203ENST00000368021 RRS1Q15050 365 aaKnown RBP15.94■□□□□ 0.14
USF1-203ENST00000368021 PPM1GO15355 546 aaPredicted RBP15.94■□□□□ 0.14
USF1-203ENST00000368021 GCP02774 474 aa15.94■□□□□ 0.14
USF1-203ENST00000368021 U2AF1L5P0DN76 240 aaPredicted RBP15.94■□□□□ 0.14
USF1-203ENST00000368021 U2AF1Q01081 240 aaKnown RBP eCLIP15.94■□□□□ 0.14
USF1-203ENST00000368021 CHRNA2Q15822 529 aa15.94■□□□□ 0.14
USF1-203ENST00000368021 KIF24Q5T7B8 1368 aa15.93■□□□□ 0.14
USF1-203ENST00000368021 FNBP4Q8N3X1 1017 aaPredicted RBP15.93■□□□□ 0.14
USF1-203ENST00000368021 RUNDC1Q96C34 613 aa15.93■□□□□ 0.14
USF1-203ENST00000368021 QTRT2Q9H974 415 aaKnown RBP15.93■□□□□ 0.14
USF1-203ENST00000368021 PRDM11Q9NQV5 511 aa15.93■□□□□ 0.14
USF1-203ENST00000368021 NCBP3Q53F19 620 aaKnown RBP15.92■□□□□ 0.14
USF1-203ENST00000368021 CCDC146Q8IYE0 955 aa15.92■□□□□ 0.14
USF1-203ENST00000368021 KIAA0232Q92628 1395 aa15.92■□□□□ 0.14
USF1-203ENST00000368021 APAF1O14727 1248 aa15.91■□□□□ 0.14
USF1-203ENST00000368021 U2SURPO15042 1029 aaKnown RBP15.91■□□□□ 0.14
USF1-203ENST00000368021 IL13P35225 146 aa15.91■□□□□ 0.14
USF1-203ENST00000368021 PNNQ9H307 717 aaKnown RBP15.91■□□□□ 0.14
USF1-203ENST00000368021 BTG4Q9NY30 223 aa15.91■□□□□ 0.14
USF1-203ENST00000368021 ZNF521Q96K83 1311 aa15.91■□□□□ 0.14
USF1-203ENST00000368021 PEAK1Q9H792 1746 aa15.9■□□□□ 0.14
USF1-203ENST00000368021 USP19O94966 1318 aa15.9■□□□□ 0.14
USF1-203ENST00000368021 MAP3K19Q56UN5 1328 aa15.9■□□□□ 0.14
USF1-203ENST00000368021 FLT4P35916 1363 aa15.9■□□□□ 0.14
USF1-203ENST00000368021 ABCA3Q99758 1704 aa15.89■□□□□ 0.13
USF1-203ENST00000368021 FCHSD2O94868 740 aa15.89■□□□□ 0.13
USF1-203ENST00000368021 BCL9LQ86UU0 1499 aa15.89■□□□□ 0.13
USF1-203ENST00000368021 SENP3-EIF4A1A0A087X0R7 540 aa15.89■□□□□ 0.13
USF1-203ENST00000368021 UNC5CLQ8IV45 518 aa15.89■□□□□ 0.13
USF1-203ENST00000368021 KCNH5Q8NCM2 988 aa15.89■□□□□ 0.13
USF1-203ENST00000368021 SALL2Q9Y467 1007 aaPredicted RBP15.89■□□□□ 0.13
USF1-203ENST00000368021 NFAT5O94916 1531 aa15.88■□□□□ 0.13
USF1-203ENST00000368021 PLEKHF1Q96S99 279 aa15.88■□□□□ 0.13
USF1-203ENST00000368021 CCDC9Q9Y3X0 531 aaKnown RBP15.88■□□□□ 0.13
USF1-203ENST00000368021 SLIT3O75094 1523 aa15.88■□□□□ 0.13
USF1-203ENST00000368021 RXRBP28702 533 aa15.87■□□□□ 0.13
USF1-203ENST00000368021 TRPC5Q9UL62 973 aaPredicted RBP15.87■□□□□ 0.13
USF1-203ENST00000368021 RTL1A6NKG5 1358 aa15.87■□□□□ 0.13
USF1-203ENST00000368021 CRYBG1Q9Y4K1 1723 aa15.87■□□□□ 0.13
USF1-203ENST00000368021 TCP11L2Q8N4U5 519 aa15.87■□□□□ 0.13
USF1-203ENST00000368021 STRN4Q9NRL3 753 aa15.87■□□□□ 0.13
USF1-203ENST00000368021 PHRF1Q9P1Y6 1649 aaKnown RBP15.86■□□□□ 0.13
USF1-203ENST00000368021 CCDC27Q2M243 656 aa15.86■□□□□ 0.13
USF1-203ENST00000368021 SLIT2O94813 1529 aa15.86■□□□□ 0.13
USF1-203ENST00000368021 AMPHP49418 695 aa15.85■□□□□ 0.13
USF1-203ENST00000368021 EIF4A2Q14240 407 aaKnown RBP15.85■□□□□ 0.13
USF1-203ENST00000368021 HSP90AB2PQ58FF8 381 aa15.85■□□□□ 0.13
USF1-203ENST00000368021 RSPH6AQ9H0K4 717 aa15.85■□□□□ 0.13
USF1-203ENST00000368021 EP400Q96L91 3159 aa15.84■□□□□ 0.13
USF1-203ENST00000368021 RGPD1P0DJD0 1748 aa15.84■□□□□ 0.13
USF1-203ENST00000368021 MAPK8IP3Q9UPT6 1336 aa15.84■□□□□ 0.13
USF1-203ENST00000368021 EVA1CP58658 441 aa15.84■□□□□ 0.13
USF1-203ENST00000368021 RBM6P78332 1123 aaKnown RBP15.84■□□□□ 0.13
USF1-203ENST00000368021 GOLGA2Q08379 1002 aa15.84■□□□□ 0.13
USF1-203ENST00000368021 LTN1O94822 1766 aa15.84■□□□□ 0.13
USF1-203ENST00000368021 GJD4Q96KN9 370 aaPredicted RBP15.83■□□□□ 0.12
USF1-203ENST00000368021 HOXC9P31274 260 aa15.82■□□□□ 0.12
USF1-203ENST00000368021 WWC1Q8IX03 1113 aa15.82■□□□□ 0.12
USF1-203ENST00000368021 USP35Q9P2H5 1018 aa15.82■□□□□ 0.12
USF1-203ENST00000368021 AXIN2Q9Y2T1 843 aa15.82■□□□□ 0.12
USF1-203ENST00000368021 CPDO75976 1380 aa15.82■□□□□ 0.12
USF1-203ENST00000368021 NEFMP07197 916 aa15.82■□□□□ 0.12
USF1-203ENST00000368021 ARHGEF25Q86VW2 580 aa15.82■□□□□ 0.12
USF1-203ENST00000368021 CDCA7LQ96GN5 454 aa15.82■□□□□ 0.12
USF1-203ENST00000368021 PLCH1Q4KWH8 1693 aa15.82■□□□□ 0.12
USF1-203ENST00000368021 PRKAR2BP31323 418 aa15.81■□□□□ 0.12
USF1-203ENST00000368021 ATRNO75882 1429 aa15.81■□□□□ 0.12
USF1-203ENST00000368021 TMPOP42166 694 aaKnown RBP15.8■□□□□ 0.12
USF1-203ENST00000368021 VPS72Q15906 364 aa15.8■□□□□ 0.12
USF1-203ENST00000368021 IP6K1Q92551 441 aa15.8■□□□□ 0.12
USF1-203ENST00000368021 COL14A1Q05707 1796 aaKnown RBP15.8■□□□□ 0.12
USF1-203ENST00000368021 HMOX1P09601 288 aa15.8■□□□□ 0.12
USF1-203ENST00000368021 WDR63Q8IWG1 891 aa15.8■□□□□ 0.12
USF1-203ENST00000368021 E9PSI1 815 aa15.79■□□□□ 0.12
USF1-203ENST00000368021 SLFN5Q08AF3 891 aa15.79■□□□□ 0.12
USF1-203ENST00000368021 LARP1Q6PKG0 1096 aaKnown RBP15.79■□□□□ 0.12
USF1-203ENST00000368021 TRMT2AQ8IZ69 625 aaKnown RBP15.79■□□□□ 0.12
USF1-203ENST00000368021 CAMTA1Q9Y6Y1 1673 aa15.79■□□□□ 0.12
USF1-203ENST00000368021 KDRP35968 1356 aa15.79■□□□□ 0.12
USF1-203ENST00000368021 A0A0G2JS52 829 aa15.78■□□□□ 0.12
USF1-203ENST00000368021 NEUROD2Q15784 382 aa15.78■□□□□ 0.12
USF1-203ENST00000368021 DUSP27Q5VZP5 1158 aa15.78■□□□□ 0.12
USF1-203ENST00000368021 RRP7AQ9Y3A4 280 aaKnown RBP15.78■□□□□ 0.12
USF1-203ENST00000368021 SUPT16HQ9Y5B9 1047 aaKnown RBP15.78■□□□□ 0.12
USF1-203ENST00000368021 IGSF1Q8N6C5 1336 aa15.78■□□□□ 0.12
USF1-203ENST00000368021 FAM98CQ17RN3 349 aaKnown RBP15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms