RNA–Protein interactions for RNA: ENST00000367094.6

TULP4-201, Transcript of tubby like protein 4, humanhuman

TSL 1 (best) BASIC

Gene TULP4, Length 5,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP4-201ENST00000367094 ARID3AQ99856 593 aa12.2□□□□□ -0.46
TULP4-201ENST00000367094 ESCO1Q5FWF5 840 aa12.2□□□□□ -0.46
TULP4-201ENST00000367094 AEBP1Q8IUX7 1158 aa12.2□□□□□ -0.46
TULP4-201ENST00000367094 TRAK2O60296 914 aa12.2□□□□□ -0.46
TULP4-201ENST00000367094 FANCAO15360 1455 aa12.2□□□□□ -0.46
TULP4-201ENST00000367094 SPG7Q9UQ90 795 aa12.2□□□□□ -0.46
TULP4-201ENST00000367094 PDE4CQ08493 712 aa12.19□□□□□ -0.46
TULP4-201ENST00000367094 SHANK2Q9UPX8 1470 aa12.19□□□□□ -0.46
TULP4-201ENST00000367094 RAPGEF3O95398 923 aa12.19□□□□□ -0.46
TULP4-201ENST00000367094 XBP1P17861 261 aa12.19□□□□□ -0.46
TULP4-201ENST00000367094 DHX16O60231 1041 aaKnown RBP12.19□□□□□ -0.46
TULP4-201ENST00000367094 TBC1D2BQ9UPU7 963 aa12.19□□□□□ -0.46
TULP4-201ENST00000367094 DENND4BO75064 1496 aaPredicted RBP12.19□□□□□ -0.46
TULP4-201ENST00000367094 AIMP1Q12904 312 aaKnown RBP12.19□□□□□ -0.46
TULP4-201ENST00000367094 ANKLE2Q86XL3 938 aa12.19□□□□□ -0.46
TULP4-201ENST00000367094 NEUROD6Q96NK8 337 aa12.19□□□□□ -0.46
TULP4-201ENST00000367094 K7ELQ4 463 aaPredicted RBP12.18□□□□□ -0.46
TULP4-201ENST00000367094 KIF6Q6ZMV9 814 aa12.18□□□□□ -0.46
TULP4-201ENST00000367094 PROSER2Q86WR7 435 aaPredicted RBP12.18□□□□□ -0.46
TULP4-201ENST00000367094 NUDT16Q96DE0 195 aaKnown RBP12.18□□□□□ -0.46
TULP4-201ENST00000367094 BRMS1Q9HCU9 246 aa12.18□□□□□ -0.46
TULP4-201ENST00000367094 FOXD4L6Q3SYB3 417 aaPredicted RBP12.18□□□□□ -0.46
TULP4-201ENST00000367094 FOXD4L3Q6VB84 417 aaPredicted RBP12.18□□□□□ -0.46
TULP4-201ENST00000367094 NASPP49321 788 aaPredicted RBP12.18□□□□□ -0.46
TULP4-201ENST00000367094 KCNH5Q8NCM2 988 aa12.18□□□□□ -0.46
TULP4-201ENST00000367094 ZNF608Q9ULD9 1512 aaPredicted RBP12.18□□□□□ -0.46
TULP4-201ENST00000367094 ADAMTS12P58397 1594 aa12.18□□□□□ -0.46
TULP4-201ENST00000367094 NEK4P51957 841 aa12.18□□□□□ -0.46
TULP4-201ENST00000367094 SART3Q15020 963 aaKnown RBP12.17□□□□□ -0.46
TULP4-201ENST00000367094 LRPPRCP42704 1394 aaKnown RBP12.17□□□□□ -0.46
TULP4-201ENST00000367094 FAM43AQ8N2R8 423 aa12.17□□□□□ -0.46
TULP4-201ENST00000367094 KRI1Q8N9T8 703 aaKnown RBP12.17□□□□□ -0.46
TULP4-201ENST00000367094 WASHC4Q2M389 1173 aa12.17□□□□□ -0.46
TULP4-201ENST00000367094 NUTM2GQ5VZR2 741 aa12.17□□□□□ -0.46
TULP4-201ENST00000367094 PLCH2O75038 1416 aa12.17□□□□□ -0.46
TULP4-201ENST00000367094 ANKRD36BQ8N2N9 1353 aa12.17□□□□□ -0.46
TULP4-201ENST00000367094 C11orf95C9JLR9 678 aaPredicted RBP12.17□□□□□ -0.46
TULP4-201ENST00000367094 ZNF530Q6P9A1 599 aaPredicted RBP12.17□□□□□ -0.46
TULP4-201ENST00000367094 HOMER1Q86YM7 354 aa12.17□□□□□ -0.46
TULP4-201ENST00000367094 TRIM34Q9BYJ4 488 aa12.17□□□□□ -0.46
TULP4-201ENST00000367094 IL27Q8NEV9 243 aa12.16□□□□□ -0.46
TULP4-201ENST00000367094 PCMTD1Q96MG8 357 aaPredicted RBP12.16□□□□□ -0.46
TULP4-201ENST00000367094 KIAA0556O60303 1618 aa12.16□□□□□ -0.46
TULP4-201ENST00000367094 IL16Q14005 1332 aa12.16□□□□□ -0.46
TULP4-201ENST00000367094 MNS1Q8NEH6 495 aa12.16□□□□□ -0.46
TULP4-201ENST00000367094 ZNF396Q96N95 335 aaPredicted RBP12.16□□□□□ -0.46
TULP4-201ENST00000367094 NUP153P49790 1475 aaKnown RBP12.16□□□□□ -0.46
TULP4-201ENST00000367094 WDR33Q9C0J8 1336 aaKnown RBP12.16□□□□□ -0.46
TULP4-201ENST00000367094 ARHGEF12Q9NZN5 1544 aa12.16□□□□□ -0.46
TULP4-201ENST00000367094 C14orf93Q9H972 538 aaKnown RBP12.16□□□□□ -0.46
TULP4-201ENST00000367094 KDM5BQ9UGL1 1544 aa12.16□□□□□ -0.46
TULP4-201ENST00000367094 CCDC66A2RUB6 948 aa12.16□□□□□ -0.46
TULP4-201ENST00000367094 CTDP1Q9Y5B0 961 aaPredicted RBP12.16□□□□□ -0.46
TULP4-201ENST00000367094 CCP110O43303 1012 aa12.15□□□□□ -0.46
TULP4-201ENST00000367094 ZSCAN31Q96LW9 406 aaPredicted RBP12.15□□□□□ -0.46
TULP4-201ENST00000367094 WDR62O43379 1518 aa12.15□□□□□ -0.46
TULP4-201ENST00000367094 RARSP54136 660 aaKnown RBP12.15□□□□□ -0.46
TULP4-201ENST00000367094 CYP46A1Q9Y6A2 500 aa12.15□□□□□ -0.46
TULP4-201ENST00000367094 ZRSR2Q15696 482 aaKnown RBP12.15□□□□□ -0.46
TULP4-201ENST00000367094 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.15□□□□□ -0.47
TULP4-201ENST00000367094 CCDC158Q5M9N0 1113 aa12.14□□□□□ -0.47
TULP4-201ENST00000367094 SYTL4Q96C24 671 aaPredicted RBP12.14□□□□□ -0.47
TULP4-201ENST00000367094 TSPY26PQ9H489 355 aa12.14□□□□□ -0.47
TULP4-201ENST00000367094 C1orf115Q9H7X2 142 aa12.14□□□□□ -0.47
TULP4-201ENST00000367094 GNAT3A8MTJ3 354 aa12.14□□□□□ -0.47
TULP4-201ENST00000367094 OLFM4Q6UX06 510 aa12.14□□□□□ -0.47
TULP4-201ENST00000367094 NOS1P29475 1434 aa12.14□□□□□ -0.47
TULP4-201ENST00000367094 ATP10BO94823 1461 aa12.14□□□□□ -0.47
TULP4-201ENST00000367094 RAB11FIP3O75154 756 aa12.14□□□□□ -0.47
TULP4-201ENST00000367094 VSIG10Q8N0Z9 540 aa12.14□□□□□ -0.47
TULP4-201ENST00000367094 ZSCAN25Q6NSZ9 544 aa12.13□□□□□ -0.47
TULP4-201ENST00000367094 RBM33Q96EV2 1170 aaKnown RBP12.13□□□□□ -0.47
TULP4-201ENST00000367094 PUS7Q96PZ0 661 aaKnown RBP12.13□□□□□ -0.47
TULP4-201ENST00000367094 ASXL1Q8IXJ9 1541 aa12.13□□□□□ -0.47
TULP4-201ENST00000367094 TTC21BQ7Z4L5 1316 aa12.13□□□□□ -0.47
TULP4-201ENST00000367094 KRT32Q14532 448 aa12.13□□□□□ -0.47
TULP4-201ENST00000367094 ODF2Q5BJF6 829 aa12.13□□□□□ -0.47
TULP4-201ENST00000367094 ADGRF5Q8IZF2 1346 aa12.13□□□□□ -0.47
TULP4-201ENST00000367094 TMEM57Q8N5G2 664 aa12.12□□□□□ -0.47
TULP4-201ENST00000367094 PTPRKQ15262 1439 aa12.12□□□□□ -0.47
TULP4-201ENST00000367094 SLC3A2P08195 630 aaKnown RBP12.12□□□□□ -0.47
TULP4-201ENST00000367094 CABP4P57796 275 aa12.12□□□□□ -0.47
TULP4-201ENST00000367094 CT47A1Q5JQC4 288 aaPredicted RBP12.12□□□□□ -0.47
TULP4-201ENST00000367094 JMYQ8N9B5 988 aa12.12□□□□□ -0.47
TULP4-201ENST00000367094 PRAG1Q86YV5 1406 aa12.12□□□□□ -0.47
TULP4-201ENST00000367094 CCDC43Q96MW1 224 aaKnown RBP12.11□□□□□ -0.47
TULP4-201ENST00000367094 PATL2C9JE40 543 aaKnown RBP12.11□□□□□ -0.47
TULP4-201ENST00000367094 KINO60870 393 aaKnown RBP12.11□□□□□ -0.47
TULP4-201ENST00000367094 PIP4K2AP48426 406 aaPredicted RBP12.11□□□□□ -0.47
TULP4-201ENST00000367094 GNL3LQ9NVN8 582 aaKnown RBP12.11□□□□□ -0.47
TULP4-201ENST00000367094 DISP3Q9P2K9 1392 aa12.11□□□□□ -0.47
TULP4-201ENST00000367094 PLEKHH1Q9ULM0 1364 aa12.11□□□□□ -0.47
TULP4-201ENST00000367094 PTPRCP08575 1304 aa12.11□□□□□ -0.47
TULP4-201ENST00000367094 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.11□□□□□ -0.47
TULP4-201ENST00000367094 WASLO00401 505 aaPredicted RBP12.11□□□□□ -0.47
TULP4-201ENST00000367094 AMOTQ4VCS5 1084 aa12.11□□□□□ -0.47
TULP4-201ENST00000367094 TTC39AQ5SRH9 613 aa12.11□□□□□ -0.47
TULP4-201ENST00000367094 CAVIN1Q6NZI2 390 aaKnown RBP12.1□□□□□ -0.47
TULP4-201ENST00000367094 RRS1Q15050 365 aaKnown RBP12.1□□□□□ -0.47
TULP4-201ENST00000367094 ZNF592Q92610 1267 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms