RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 PIK3R5Q8WYR1 880 aa13.04□□□□□ -0.32
CDC42BPA-205ENST00000366769 SYCP1Q15431 976 aa13.04□□□□□ -0.32
CDC42BPA-205ENST00000366769 HOMEZQ8IX15 550 aa13.04□□□□□ -0.32
CDC42BPA-205ENST00000366769 KRBA2Q6ZNG9 492 aa13.04□□□□□ -0.32
CDC42BPA-205ENST00000366769 INTS3Q68E01 1043 aaKnown RBP13.04□□□□□ -0.32
CDC42BPA-205ENST00000366769 CLNS1AP54105 237 aaKnown RBP13.04□□□□□ -0.32
CDC42BPA-205ENST00000366769 MICALCLQ6ZW33 695 aa13.04□□□□□ -0.32
CDC42BPA-205ENST00000366769 MICALL1Q8N3F8 863 aa13.04□□□□□ -0.32
CDC42BPA-205ENST00000366769 TERF2IPQ9NYB0 399 aa13.04□□□□□ -0.32
CDC42BPA-205ENST00000366769 CCDC88BA6NC98 1476 aa13.04□□□□□ -0.32
CDC42BPA-205ENST00000366769 ERLIN2O94905 339 aa13.03□□□□□ -0.32
CDC42BPA-205ENST00000366769 FILIP1Q7Z7B0 1213 aa13.03□□□□□ -0.32
CDC42BPA-205ENST00000366769 OGFRQ9NZT2 677 aa13.03□□□□□ -0.32
CDC42BPA-205ENST00000366769 CLIP2Q9UDT6 1046 aa13.03□□□□□ -0.32
CDC42BPA-205ENST00000366769 U2AF2P26368 475 aaKnown RBP eCLIP13.02□□□□□ -0.322e-6■■■□□ 19
CDC42BPA-205ENST00000366769 TTC5Q8N0Z6 440 aa13.02□□□□□ -0.33
CDC42BPA-205ENST00000366769 CIZ1Q9ULV3 898 aaPredicted RBP13.02□□□□□ -0.33
CDC42BPA-205ENST00000366769 JAKMIP3Q5VZ66 844 aa13.02□□□□□ -0.33
CDC42BPA-205ENST00000366769 SDF4Q9BRK5 362 aa13.02□□□□□ -0.33
CDC42BPA-205ENST00000366769 NEK4P51957 841 aa13.02□□□□□ -0.33
CDC42BPA-205ENST00000366769 ZBTB12Q9Y330 459 aaPredicted RBP13.02□□□□□ -0.33
CDC42BPA-205ENST00000366769 EID1Q9Y6B2 187 aa13.02□□□□□ -0.33
CDC42BPA-205ENST00000366769 MRVI1Q9Y6F6 885 aa13.02□□□□□ -0.33
CDC42BPA-205ENST00000366769 ATP2B2Q01814 1243 aa13.01□□□□□ -0.33
CDC42BPA-205ENST00000366769 PANK3Q9H999 370 aa13.01□□□□□ -0.33
CDC42BPA-205ENST00000366769 CDK5RAP3Q96JB5 506 aa13.01□□□□□ -0.33
CDC42BPA-205ENST00000366769 MAGEC2Q9UBF1 373 aaPredicted RBP13.01□□□□□ -0.33
CDC42BPA-205ENST00000366769 TEFQ10587 303 aa13.01□□□□□ -0.33
CDC42BPA-205ENST00000366769 PKD2Q13563 968 aa13.01□□□□□ -0.33
CDC42BPA-205ENST00000366769 FMN1Q68DA7 1419 aa13.01□□□□□ -0.33
CDC42BPA-205ENST00000366769 RALYLQ86SE5 291 aaKnown RBP13.01□□□□□ -0.33
CDC42BPA-205ENST00000366769 BRMS1Q9HCU9 246 aa13.01□□□□□ -0.33
CDC42BPA-205ENST00000366769 KRT18P05783 430 aaKnown RBP13□□□□□ -0.33
CDC42BPA-205ENST00000366769 ZHX3Q9H4I2 956 aa13□□□□□ -0.33
CDC42BPA-205ENST00000366769 DDX19BQ9UMR2 479 aa13□□□□□ -0.33
CDC42BPA-205ENST00000366769 G3BP1Q13283 466 aaKnown RBP eCLIP13□□□□□ -0.33
CDC42BPA-205ENST00000366769 TMCO5BA8MYB1 307 aa13□□□□□ -0.33
CDC42BPA-205ENST00000366769 IVLP07476 585 aa13□□□□□ -0.33
CDC42BPA-205ENST00000366769 ANKRD18AQ8IVF6 992 aa13□□□□□ -0.33
CDC42BPA-205ENST00000366769 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13□□□□□ -0.332e-7■■□□□ 12.9
CDC42BPA-205ENST00000366769 APAF1O14727 1248 aa12.99□□□□□ -0.33
CDC42BPA-205ENST00000366769 NOLC1Q14978 699 aaKnown RBP eCLIP12.99□□□□□ -0.33
CDC42BPA-205ENST00000366769 WASHC4Q2M389 1173 aa12.99□□□□□ -0.33
CDC42BPA-205ENST00000366769 C1orf115Q9H7X2 142 aa12.99□□□□□ -0.33
CDC42BPA-205ENST00000366769 PPP1R1BQ9UD71 204 aaPredicted RBP12.99□□□□□ -0.33
CDC42BPA-205ENST00000366769 CASQ1P31415 396 aa12.99□□□□□ -0.33
CDC42BPA-205ENST00000366769 FRMD3A2A2Y4 597 aa12.99□□□□□ -0.33
CDC42BPA-205ENST00000366769 KIF2AO00139 706 aaPredicted RBP12.99□□□□□ -0.33
CDC42BPA-205ENST00000366769 MAP2K2P36507 400 aa12.99□□□□□ -0.33
CDC42BPA-205ENST00000366769 BMS1Q14692 1282 aaKnown RBP12.99□□□□□ -0.33
CDC42BPA-205ENST00000366769 CCDC184Q52MB2 194 aa12.99□□□□□ -0.33
CDC42BPA-205ENST00000366769 SERPINC1P01008 464 aa12.98□□□□□ -0.33
CDC42BPA-205ENST00000366769 HSP90AB4PQ58FF6 505 aa12.98□□□□□ -0.33
CDC42BPA-205ENST00000366769 CCDC183Q5T5S1 534 aa12.98□□□□□ -0.33
CDC42BPA-205ENST00000366769 CRACR2AQ9BSW2 395 aa12.98□□□□□ -0.33
CDC42BPA-205ENST00000366769 KIF4AO95239 1232 aa12.98□□□□□ -0.33
CDC42BPA-205ENST00000366769 CAPN2P17655 700 aa12.98□□□□□ -0.33
CDC42BPA-205ENST00000366769 MSL1Q68DK7 614 aa12.98□□□□□ -0.33
CDC42BPA-205ENST00000366769 KIAA1328Q86T90 577 aa12.98□□□□□ -0.33
CDC42BPA-205ENST00000366769 WDR70Q9NW82 654 aa12.98□□□□□ -0.33
CDC42BPA-205ENST00000366769 C20orf194Q5TEA3 1177 aa12.97□□□□□ -0.33
CDC42BPA-205ENST00000366769 ZSWIM4Q9H7M6 989 aa12.97□□□□□ -0.33
CDC42BPA-205ENST00000366769 ERCC6Q03468 1493 aa12.97□□□□□ -0.33
CDC42BPA-205ENST00000366769 SEPT11Q9NVA2 429 aaKnown RBP12.97□□□□□ -0.33
CDC42BPA-205ENST00000366769 CFAP65Q6ZU64 1925 aaKnown RBP12.97□□□□□ -0.33
CDC42BPA-205ENST00000366769 MPHOSPH9Q99550 1183 aa12.97□□□□□ -0.33
CDC42BPA-205ENST00000366769 BCCIPQ9P287 314 aaKnown RBP eCLIP12.97□□□□□ -0.33
CDC42BPA-205ENST00000366769 SFPQP23246 707 aaKnown RBP eCLIP12.97□□□□□ -0.33
CDC42BPA-205ENST00000366769 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.96□□□□□ -0.33
CDC42BPA-205ENST00000366769 GOLGA6L10A0A0M3HER8 536 aa12.96□□□□□ -0.33
CDC42BPA-205ENST00000366769 NEUROD6Q96NK8 337 aa12.96□□□□□ -0.33
CDC42BPA-205ENST00000366769 PSMD1Q99460 953 aa12.96□□□□□ -0.33
CDC42BPA-205ENST00000366769 BAZ1AQ9NRL2 1556 aaPredicted RBP12.96□□□□□ -0.34
CDC42BPA-205ENST00000366769 MATR3P43243 847 aaKnown RBP eCLIP12.96□□□□□ -0.345e-7■■■□□ 18.6
CDC42BPA-205ENST00000366769 LUZP1Q86V48 1076 aa12.96□□□□□ -0.34
CDC42BPA-205ENST00000366769 VPS18Q9P253 973 aa12.96□□□□□ -0.34
CDC42BPA-205ENST00000366769 CFAP45Q9UL16 551 aa12.96□□□□□ -0.34
CDC42BPA-205ENST00000366769 RAI14Q9P0K7 980 aa12.96□□□□□ -0.34
CDC42BPA-205ENST00000366769 SMARCE1Q969G3 411 aa12.96□□□□□ -0.34
CDC42BPA-205ENST00000366769 HYPKQ9NX55 129 aa12.95□□□□□ -0.34
CDC42BPA-205ENST00000366769 NUP133Q8WUM0 1156 aa12.95□□□□□ -0.34
CDC42BPA-205ENST00000366769 MCM6Q14566 821 aa12.95□□□□□ -0.34
CDC42BPA-205ENST00000366769 ZNF397Q8NF99 534 aaPredicted RBP12.95□□□□□ -0.34
CDC42BPA-205ENST00000366769 SMARCC1Q92922 1105 aaPredicted RBP12.95□□□□□ -0.34
CDC42BPA-205ENST00000366769 BRD4O60885 1362 aaPredicted RBP12.95□□□□□ -0.34
CDC42BPA-205ENST00000366769 NUP62CLQ9H1M0 184 aa12.95□□□□□ -0.34
CDC42BPA-205ENST00000366769 RPAINQ86UA6 219 aa12.95□□□□□ -0.34
CDC42BPA-205ENST00000366769 PPP2R5AQ15172 486 aa12.94□□□□□ -0.34
CDC42BPA-205ENST00000366769 RBM28Q9NW13 759 aaKnown RBP12.94□□□□□ -0.34
CDC42BPA-205ENST00000366769 PPFIBP1Q86W92 1011 aa12.94□□□□□ -0.34
CDC42BPA-205ENST00000366769 TTC12Q9H892 705 aaPredicted RBP12.94□□□□□ -0.34
CDC42BPA-205ENST00000366769 ZKSCAN5Q9Y2L8 839 aa12.94□□□□□ -0.34
CDC42BPA-205ENST00000366769 MAP3K11Q16584 847 aa12.94□□□□□ -0.34
CDC42BPA-205ENST00000366769 FILIP1LQ4L180 1135 aa12.94□□□□□ -0.34
CDC42BPA-205ENST00000366769 ST20-MTHFSA0A0A6YYL1 179 aa12.94□□□□□ -0.34
CDC42BPA-205ENST00000366769 SNW1Q13573 536 aaKnown RBP12.94□□□□□ -0.34
CDC42BPA-205ENST00000366769 WDR66Q8TBY9 1149 aa12.94□□□□□ -0.34
CDC42BPA-205ENST00000366769 SSBP05455 408 aaKnown RBP eCLIP12.94□□□□□ -0.34
CDC42BPA-205ENST00000366769 XBP1P17861 261 aa12.94□□□□□ -0.34
CDC42BPA-205ENST00000366769 ISM2Q6H9L7 571 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms