RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 FAM98CQ17RN3 349 aaKnown RBP12.94□□□□□ -0.34
MRPL55-216ENST00000366744 NME9Q86XW9 330 aa12.94□□□□□ -0.34
MRPL55-216ENST00000366744 SEPT12Q8IYM1 358 aa12.94□□□□□ -0.34
MRPL55-216ENST00000366744 POLR3GLQ9BT43 218 aa12.94□□□□□ -0.34
MRPL55-216ENST00000366744 CRB1P82279 1406 aa12.94□□□□□ -0.34
MRPL55-216ENST00000366744 LRRC37A3O60309 1634 aa12.93□□□□□ -0.34
MRPL55-216ENST00000366744 COG3Q96JB2 828 aa12.93□□□□□ -0.34
MRPL55-216ENST00000366744 USP35Q9P2H5 1018 aa12.93□□□□□ -0.34
MRPL55-216ENST00000366744 SPATA31A1Q5TZJ5 1347 aa12.92□□□□□ -0.34
MRPL55-216ENST00000366744 UPF1Q92900 1129 aaKnown RBP eCLIP12.92□□□□□ -0.34
MRPL55-216ENST00000366744 CSB-PGBD3P0DP91 1061 aa12.91□□□□□ -0.34
MRPL55-216ENST00000366744 SF3B2Q13435 895 aaKnown RBP12.91□□□□□ -0.34
MRPL55-216ENST00000366744 KRT27Q7Z3Y8 459 aa12.91□□□□□ -0.34
MRPL55-216ENST00000366744 NSD3Q9BZ95 1437 aa12.9□□□□□ -0.34
MRPL55-216ENST00000366744 HSPA5P11021 654 aaKnown RBP12.9□□□□□ -0.34
MRPL55-216ENST00000366744 TOM1L2Q6ZVM7 507 aa12.9□□□□□ -0.34
MRPL55-216ENST00000366744 TCP11L2Q8N4U5 519 aa12.9□□□□□ -0.34
MRPL55-216ENST00000366744 TNS1Q9HBL0 1735 aaKnown RBP12.9□□□□□ -0.34
MRPL55-216ENST00000366744 WDR17Q8IZU2 1322 aa12.89□□□□□ -0.35
MRPL55-216ENST00000366744 BLMP54132 1417 aaPredicted RBP12.89□□□□□ -0.35
MRPL55-216ENST00000366744 LARP1Q6PKG0 1096 aaKnown RBP12.89□□□□□ -0.35
MRPL55-216ENST00000366744 ARHGEF25Q86VW2 580 aa12.89□□□□□ -0.35
MRPL55-216ENST00000366744 CCDC125Q86Z20 511 aa12.89□□□□□ -0.35
MRPL55-216ENST00000366744 THRAP3Q9Y2W1 955 aaKnown RBP12.89□□□□□ -0.35
MRPL55-216ENST00000366744 SMG6Q86US8 1419 aaKnown RBP12.88□□□□□ -0.35
MRPL55-216ENST00000366744 ONECUT3O60422 494 aaPredicted RBP12.88□□□□□ -0.35
MRPL55-216ENST00000366744 MAP2P11137 1827 aaKnown RBP12.88□□□□□ -0.35
MRPL55-216ENST00000366744 RTL1A6NKG5 1358 aa12.87□□□□□ -0.35
MRPL55-216ENST00000366744 CCDC7Q96M83 1385 aa12.87□□□□□ -0.35
MRPL55-216ENST00000366744 BARGINQ6ZT62 677 aa12.87□□□□□ -0.35
MRPL55-216ENST00000366744 ZRANB1Q9UGI0 708 aa12.87□□□□□ -0.35
MRPL55-216ENST00000366744 CGNL1Q0VF96 1302 aa12.87□□□□□ -0.35
MRPL55-216ENST00000366744 RGPD2P0DJD1 1756 aa12.86□□□□□ -0.35
MRPL55-216ENST00000366744 PDE3BQ13370 1112 aa12.86□□□□□ -0.35
MRPL55-216ENST00000366744 CDCA7Q9BWT1 371 aaPredicted RBP12.86□□□□□ -0.35
MRPL55-216ENST00000366744 SBF2Q86WG5 1849 aa12.85□□□□□ -0.35
MRPL55-216ENST00000366744 KAT6BQ8WYB5 2073 aa12.85□□□□□ -0.35
MRPL55-216ENST00000366744 AMPHP49418 695 aa12.84□□□□□ -0.35
MRPL55-216ENST00000366744 GGNBP2Q9H3C7 697 aa12.84□□□□□ -0.35
MRPL55-216ENST00000366744 OVOS2A0A0G2JMS6 1433 aa12.84□□□□□ -0.35
MRPL55-216ENST00000366744 ERBB3P21860 1342 aa12.84□□□□□ -0.35
MRPL55-216ENST00000366744 C11orf95C9JLR9 678 aaPredicted RBP12.83□□□□□ -0.36
MRPL55-216ENST00000366744 AXIN2Q9Y2T1 843 aa12.83□□□□□ -0.36
MRPL55-216ENST00000366744 NSD2O96028 1365 aa12.82□□□□□ -0.36
MRPL55-216ENST00000366744 PEAK1Q9H792 1746 aa12.82□□□□□ -0.36
MRPL55-216ENST00000366744 RGPD3A6NKT7 1758 aaPredicted RBP12.82□□□□□ -0.36
MRPL55-216ENST00000366744 RGPD4Q7Z3J3 1758 aa12.82□□□□□ -0.36
MRPL55-216ENST00000366744 TNS2Q63HR2 1409 aa12.82□□□□□ -0.36
MRPL55-216ENST00000366744 DDB1Q16531 1140 aa12.82□□□□□ -0.36
MRPL55-216ENST00000366744 ANKRD24Q8TF21 1146 aa12.82□□□□□ -0.36
MRPL55-216ENST00000366744 CARD10Q9BWT7 1032 aa12.82□□□□□ -0.36
MRPL55-216ENST00000366744 NLRP2Q9NX02 1062 aa12.82□□□□□ -0.36
MRPL55-216ENST00000366744 KIF24Q5T7B8 1368 aa12.81□□□□□ -0.36
MRPL55-216ENST00000366744 FYB1O15117 783 aa12.81□□□□□ -0.36
MRPL55-216ENST00000366744 BAG6P46379 1132 aa12.81□□□□□ -0.36
MRPL55-216ENST00000366744 FAM196AQ6ZSG2 479 aa12.81□□□□□ -0.36
MRPL55-216ENST00000366744 MAP3K19Q56UN5 1328 aa12.81□□□□□ -0.36
MRPL55-216ENST00000366744 FLT4P35916 1363 aa12.81□□□□□ -0.36
MRPL55-216ENST00000366744 IP6K1Q92551 441 aa12.8□□□□□ -0.36
MRPL55-216ENST00000366744 HOXC9P31274 260 aa12.79□□□□□ -0.36
MRPL55-216ENST00000366744 FAM182BQ5T319 152 aa12.79□□□□□ -0.36
MRPL55-216ENST00000366744 LTV1Q96GA3 475 aaPredicted RBP12.79□□□□□ -0.36
MRPL55-216ENST00000366744 NHSQ6T4R5 1651 aa12.79□□□□□ -0.36
MRPL55-216ENST00000366744 DISP2A7MBM2 1401 aa12.79□□□□□ -0.36
MRPL55-216ENST00000366744 RREB1Q92766 1687 aa12.78□□□□□ -0.36
MRPL55-216ENST00000366744 CARD14Q9BXL6 1004 aa12.78□□□□□ -0.36
MRPL55-216ENST00000366744 IL2RBP14784 551 aa12.77□□□□□ -0.37
MRPL55-216ENST00000366744 RRS1Q15050 365 aaKnown RBP12.77□□□□□ -0.37
MRPL55-216ENST00000366744 PANK3Q9H999 370 aa12.77□□□□□ -0.37
MRPL55-216ENST00000366744 KNSTRNQ9Y448 316 aa12.77□□□□□ -0.37
MRPL55-216ENST00000366744 KIF7Q2M1P5 1343 aa12.77□□□□□ -0.37
MRPL55-216ENST00000366744 NUP188Q5SRE5 1749 aa12.76□□□□□ -0.37
MRPL55-216ENST00000366744 DOT1LQ8TEK3 1739 aa12.76□□□□□ -0.37
MRPL55-216ENST00000366744 SHANK3Q9BYB0 1731 aa12.76□□□□□ -0.37
MRPL55-216ENST00000366744 INSRP06213 1382 aa12.76□□□□□ -0.37
MRPL55-216ENST00000366744 PARD3Q8TEW0 1356 aa12.76□□□□□ -0.37
MRPL55-216ENST00000366744 EXOC5O00471 708 aa12.75□□□□□ -0.37
MRPL55-216ENST00000366744 PPM1GO15355 546 aaPredicted RBP12.75□□□□□ -0.37
MRPL55-216ENST00000366744 TRIM37O94972 964 aa12.75□□□□□ -0.37
MRPL55-216ENST00000366744 BTAF1O14981 1849 aa12.74□□□□□ -0.37
MRPL55-216ENST00000366744 PKD1L3Q7Z443 1732 aa12.74□□□□□ -0.37
MRPL55-216ENST00000366744 TNNT2P45379 298 aaPredicted RBP12.73□□□□□ -0.37
MRPL55-216ENST00000366744 DEFB132Q7Z7B7 95 aa12.73□□□□□ -0.37
MRPL55-216ENST00000366744 BCL9O00512 1426 aa12.72□□□□□ -0.37
MRPL55-216ENST00000366744 APBA3O96018 575 aa12.72□□□□□ -0.37
MRPL55-216ENST00000366744 MORC1Q86VD1 984 aa12.72□□□□□ -0.37
MRPL55-216ENST00000366744 RAPGEF4Q8WZA2 1011 aa12.72□□□□□ -0.37
MRPL55-216ENST00000366744 FBLN1P23142 703 aa12.71□□□□□ -0.37
MRPL55-216ENST00000366744 EMILIN1Q9Y6C2 1016 aa12.71□□□□□ -0.37
MRPL55-216ENST00000366744 MEGF6O75095 1541 aa12.71□□□□□ -0.38
MRPL55-216ENST00000366744 HSP90AB2PQ58FF8 381 aa12.7□□□□□ -0.38
MRPL55-216ENST00000366744 TATP17735 454 aaPredicted RBP12.69□□□□□ -0.38
MRPL55-216ENST00000366744 EN1Q05925 392 aaPredicted RBP12.69□□□□□ -0.38
MRPL55-216ENST00000366744 MARCH10Q8NA82 808 aaPredicted RBP12.69□□□□□ -0.38
MRPL55-216ENST00000366744 WASHC2AQ641Q2 1341 aa12.68□□□□□ -0.38
MRPL55-216ENST00000366744 USHBP1Q8N6Y0 703 aa12.68□□□□□ -0.38
MRPL55-216ENST00000366744 ITGB4P16144 1822 aa12.67□□□□□ -0.38
MRPL55-216ENST00000366744 PCDH11XQ9BZA7 1347 aa12.67□□□□□ -0.38
MRPL55-216ENST00000366744 PCDH11YQ9BZA8 1340 aa12.67□□□□□ -0.38
MRPL55-216ENST00000366744 BCL11BQ9C0K0 894 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms