RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 CABP1Q9NZU7 370 aa9.25□□□□□ -0.93
RNU1-55P-201ENST00000365510 ATF5Q9Y2D1 282 aaPredicted RBP9.25□□□□□ -0.93
RNU1-55P-201ENST00000365510 CD163L1Q9NR16 1453 aa9.25□□□□□ -0.93
RNU1-55P-201ENST00000365510 TNS1Q9HBL0 1735 aaKnown RBP9.25□□□□□ -0.93
RNU1-55P-201ENST00000365510 CRYBG1Q9Y4K1 1723 aa9.25□□□□□ -0.93
RNU1-55P-201ENST00000365510 CPSF1Q10570 1443 aaKnown RBP9.24□□□□□ -0.93
RNU1-55P-201ENST00000365510 THSD7AQ9UPZ6 1657 aa9.24□□□□□ -0.93
RNU1-55P-201ENST00000365510 PLEKHG3A1L390 1219 aa9.24□□□□□ -0.93
RNU1-55P-201ENST00000365510 GCP02774 474 aa9.24□□□□□ -0.93
RNU1-55P-201ENST00000365510 ANO8Q9HCE9 1232 aaPredicted RBP9.24□□□□□ -0.93
RNU1-55P-201ENST00000365510 POLR3AO14802 1390 aaPredicted RBP9.24□□□□□ -0.93
RNU1-55P-201ENST00000365510 KTN1Q86UP2 1357 aaKnown RBP9.24□□□□□ -0.93
RNU1-55P-201ENST00000365510 EDC4Q6P2E9 1401 aaKnown RBP9.23□□□□□ -0.93
RNU1-55P-201ENST00000365510 SSH2Q76I76 1423 aa9.23□□□□□ -0.93
RNU1-55P-201ENST00000365510 ZBTB7AO95365 584 aa9.23□□□□□ -0.93
RNU1-55P-201ENST00000365510 BARGINQ6ZT62 677 aa9.23□□□□□ -0.93
RNU1-55P-201ENST00000365510 MARCH10Q8NA82 808 aaPredicted RBP9.23□□□□□ -0.93
RNU1-55P-201ENST00000365510 CGNL1Q0VF96 1302 aa9.23□□□□□ -0.93
RNU1-55P-201ENST00000365510 NSD2O96028 1365 aa9.23□□□□□ -0.93
RNU1-55P-201ENST00000365510 NPC1L1Q9UHC9 1359 aa9.23□□□□□ -0.93
RNU1-55P-201ENST00000365510 RGPD1P0DJD0 1748 aa9.22□□□□□ -0.93
RNU1-55P-201ENST00000365510 MON2Q7Z3U7 1717 aa9.22□□□□□ -0.93
RNU1-55P-201ENST00000365510 AKAP12Q02952 1782 aa9.22□□□□□ -0.93
RNU1-55P-201ENST00000365510 PER1O15534 1290 aaPredicted RBP9.22□□□□□ -0.93
RNU1-55P-201ENST00000365510 KCNQ2O43526 872 aa9.22□□□□□ -0.93
RNU1-55P-201ENST00000365510 NLRP6P59044 892 aa9.22□□□□□ -0.93
RNU1-55P-201ENST00000365510 NBPF14Q5TI25 921 aa9.22□□□□□ -0.93
RNU1-55P-201ENST00000365510 ZNF692Q9BU19 519 aaPredicted RBP9.22□□□□□ -0.93
RNU1-55P-201ENST00000365510 PPP1R1BQ9UD71 204 aaPredicted RBP9.22□□□□□ -0.93
RNU1-55P-201ENST00000365510 USP6P35125 1406 aa9.22□□□□□ -0.93
RNU1-55P-201ENST00000365510 NRKQ7Z2Y5 1582 aa9.21□□□□□ -0.93
RNU1-55P-201ENST00000365510 CARD14Q9BXL6 1004 aa9.21□□□□□ -0.94
RNU1-55P-201ENST00000365510 AMER1Q5JTC6 1135 aaPredicted RBP9.2□□□□□ -0.94
RNU1-55P-201ENST00000365510 CC2D1BQ5T0F9 858 aaKnown RBP9.2□□□□□ -0.94
RNU1-55P-201ENST00000365510 TOM1L2Q6ZVM7 507 aa9.2□□□□□ -0.94
RNU1-55P-201ENST00000365510 NLRP13Q86W25 1043 aa9.2□□□□□ -0.94
RNU1-55P-201ENST00000365510 SPON1Q9HCB6 807 aa9.2□□□□□ -0.94
RNU1-55P-201ENST00000365510 BRD4O60885 1362 aaPredicted RBP9.2□□□□□ -0.94
RNU1-55P-201ENST00000365510 DISP2A7MBM2 1401 aa9.2□□□□□ -0.94
RNU1-55P-201ENST00000365510 PHRF1Q9P1Y6 1649 aaKnown RBP9.2□□□□□ -0.94
RNU1-55P-201ENST00000365510 RALBP1Q15311 655 aa9.19□□□□□ -0.94
RNU1-55P-201ENST00000365510 ACSBG1Q96GR2 724 aa9.19□□□□□ -0.94
RNU1-55P-201ENST00000365510 BCL11BQ9C0K0 894 aaPredicted RBP9.19□□□□□ -0.94
RNU1-55P-201ENST00000365510 PRKRIP1Q9H875 184 aaPredicted RBP9.19□□□□□ -0.94
RNU1-55P-201ENST00000365510 PARD3Q8TEW0 1356 aa9.19□□□□□ -0.94
RNU1-55P-201ENST00000365510 KIF20BQ96Q89 1820 aa9.19□□□□□ -0.94
RNU1-55P-201ENST00000365510 USP19O94966 1318 aa9.18□□□□□ -0.94
RNU1-55P-201ENST00000365510 CNGB1Q14028 1251 aaPredicted RBP9.18□□□□□ -0.94
RNU1-55P-201ENST00000365510 DDB1Q16531 1140 aa9.18□□□□□ -0.94
RNU1-55P-201ENST00000365510 NUP188Q5SRE5 1749 aa9.18□□□□□ -0.94
RNU1-55P-201ENST00000365510 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.18□□□□□ -0.94
RNU1-55P-201ENST00000365510 TTC21AQ8NDW8 1320 aa9.18□□□□□ -0.94
RNU1-55P-201ENST00000365510 TTC21BQ7Z4L5 1316 aa9.17□□□□□ -0.94
RNU1-55P-201ENST00000365510 KCNQ4P56696 695 aa9.17□□□□□ -0.94
RNU1-55P-201ENST00000365510 KAT6BQ8WYB5 2073 aa9.17□□□□□ -0.94
RNU1-55P-201ENST00000365510 MYBBP1AQ9BQG0 1328 aaKnown RBP9.16□□□□□ -0.94
RNU1-55P-201ENST00000365510 CSB-PGBD3P0DP91 1061 aa9.16□□□□□ -0.94
RNU1-55P-201ENST00000365510 FBLN1P23142 703 aa9.16□□□□□ -0.94
RNU1-55P-201ENST00000365510 PTGER2P43116 358 aa9.16□□□□□ -0.94
RNU1-55P-201ENST00000365510 TXNRD1Q16881 649 aa9.16□□□□□ -0.94
RNU1-55P-201ENST00000365510 MORC1Q86VD1 984 aa9.16□□□□□ -0.94
RNU1-55P-201ENST00000365510 MIER1Q8N108 512 aa9.16□□□□□ -0.94
RNU1-55P-201ENST00000365510 RGPD5Q99666 1765 aa9.16□□□□□ -0.94
RNU1-55P-201ENST00000365510 ANKRD26Q9UPS8 1709 aa9.16□□□□□ -0.94
RNU1-55P-201ENST00000365510 COL5A2P05997 1499 aaPredicted RBP9.15□□□□□ -0.94
RNU1-55P-201ENST00000365510 OVOS2A0A0J9YW53 1432 aa9.15□□□□□ -0.94
RNU1-55P-201ENST00000365510 OVOS2Q6IE36 1432 aa9.15□□□□□ -0.94
RNU1-55P-201ENST00000365510 CPDO75976 1380 aa9.15□□□□□ -0.94
RNU1-55P-201ENST00000365510 FYB1O15117 783 aa9.15□□□□□ -0.94
RNU1-55P-201ENST00000365510 NME9Q86XW9 330 aa9.15□□□□□ -0.94
RNU1-55P-201ENST00000365510 COG3Q96JB2 828 aa9.15□□□□□ -0.94
RNU1-55P-201ENST00000365510 GGNBP2Q9H3C7 697 aa9.15□□□□□ -0.94
RNU1-55P-201ENST00000365510 THRAP3Q9Y2W1 955 aaKnown RBP9.15□□□□□ -0.94
RNU1-55P-201ENST00000365510 LMO7Q8WWI1 1683 aa9.15□□□□□ -0.94
RNU1-55P-201ENST00000365510 RREB1Q92766 1687 aa9.15□□□□□ -0.94
RNU1-55P-201ENST00000365510 PIK3C2AO00443 1686 aa9.14□□□□□ -0.95
RNU1-55P-201ENST00000365510 CCER2I3L3R5 266 aa9.14□□□□□ -0.95
RNU1-55P-201ENST00000365510 PLSCR1O15162 318 aa9.14□□□□□ -0.95
RNU1-55P-201ENST00000365510 ARHGEF25Q86VW2 580 aa9.14□□□□□ -0.95
RNU1-55P-201ENST00000365510 FHDC1Q9C0D6 1143 aaPredicted RBP9.14□□□□□ -0.95
RNU1-55P-201ENST00000365510 SBF2Q86WG5 1849 aa9.14□□□□□ -0.95
RNU1-55P-201ENST00000365510 CRB1P82279 1406 aa9.14□□□□□ -0.95
RNU1-55P-201ENST00000365510 USP54Q70EL1 1684 aa9.13□□□□□ -0.95
RNU1-55P-201ENST00000365510 EXOC5O00471 708 aa9.13□□□□□ -0.95
RNU1-55P-201ENST00000365510 ZNF784Q8NCA9 323 aaPredicted RBP9.13□□□□□ -0.95
RNU1-55P-201ENST00000365510 SYT17Q9BSW7 474 aa9.13□□□□□ -0.95
RNU1-55P-201ENST00000365510 COL18A1P39060 1754 aa9.13□□□□□ -0.95
RNU1-55P-201ENST00000365510 AATKQ6ZMQ8 1374 aa9.12□□□□□ -0.95
RNU1-55P-201ENST00000365510 USP31Q70CQ4 1352 aa9.12□□□□□ -0.95
RNU1-55P-201ENST00000365510 WDR17Q8IZU2 1322 aa9.12□□□□□ -0.95
RNU1-55P-201ENST00000365510 PEAK1Q9H792 1746 aa9.12□□□□□ -0.95
RNU1-55P-201ENST00000365510 TNNT2P45379 298 aaPredicted RBP9.12□□□□□ -0.95
RNU1-55P-201ENST00000365510 SLC15A2Q16348 729 aa9.12□□□□□ -0.95
RNU1-55P-201ENST00000365510 ZNF827Q17R98 1081 aa9.12□□□□□ -0.95
RNU1-55P-201ENST00000365510 LTV1Q96GA3 475 aaPredicted RBP9.12□□□□□ -0.95
RNU1-55P-201ENST00000365510 LRRC4BQ9NT99 713 aa9.12□□□□□ -0.95
RNU1-55P-201ENST00000365510 STK32BQ9NY57 414 aa9.12□□□□□ -0.95
RNU1-55P-201ENST00000365510 PPP2R1AP30153 589 aa9.11□□□□□ -0.95
RNU1-55P-201ENST00000365510 KLHL34Q8N239 644 aa9.11□□□□□ -0.95
RNU1-55P-201ENST00000365510 CARD10Q9BWT7 1032 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms