RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 PPP2R2DQ66LE6 453 aa6.06□□□□□ -1.44
RNU4-42P-201ENST00000364738 PDXDC2PQ6P474 469 aa6.06□□□□□ -1.44
RNU4-42P-201ENST00000364738 CCDC116Q8IYX3 515 aa6.06□□□□□ -1.44
RNU4-42P-201ENST00000364738 SLC10A4Q96EP9 437 aa6.06□□□□□ -1.44
RNU4-42P-201ENST00000364738 ZC3H4Q9UPT8 1303 aaKnown RBP6.05□□□□□ -1.44
RNU4-42P-201ENST00000364738 SLC24A1O60721 1099 aa6.05□□□□□ -1.44
RNU4-42P-201ENST00000364738 GMPRP36959 345 aa6.05□□□□□ -1.44
RNU4-42P-201ENST00000364738 NR6A1Q15406 480 aa6.05□□□□□ -1.44
RNU4-42P-201ENST00000364738 ERBB4Q15303 1308 aa6.04□□□□□ -1.44
RNU4-42P-201ENST00000364738 ZBTB33Q86T24 672 aa6.04□□□□□ -1.44
RNU4-42P-201ENST00000364738 USP17L8P0C7I0 530 aa6.03□□□□□ -1.44
RNU4-42P-201ENST00000364738 PPP1R26Q5T8A7 1209 aaPredicted RBP6.03□□□□□ -1.44
RNU4-42P-201ENST00000364738 KCTD15Q96SI1 283 aaPredicted RBP6.03□□□□□ -1.44
RNU4-42P-201ENST00000364738 TSEN34Q9BSV6 310 aaKnown RBP6.03□□□□□ -1.44
RNU4-42P-201ENST00000364738 PGPEP1Q9NXJ5 209 aa6.03□□□□□ -1.44
RNU4-42P-201ENST00000364738 PTK2Q05397 1052 aa6.02□□□□□ -1.45
RNU4-42P-201ENST00000364738 PNMA1Q8ND90 353 aa6.02□□□□□ -1.45
RNU4-42P-201ENST00000364738 HMX1Q9NP08 348 aaPredicted RBP6.02□□□□□ -1.45
RNU4-42P-201ENST00000364738 CDV3Q9UKY7 258 aaKnown RBP6.02□□□□□ -1.45
RNU4-42P-201ENST00000364738 RFC5P40937 340 aa6.01□□□□□ -1.45
RNU4-42P-201ENST00000364738 DHX9Q08211 1270 aaKnown RBP6.01□□□□□ -1.45
RNU4-42P-201ENST00000364738 CBLBQ13191 982 aa6.01□□□□□ -1.45
RNU4-42P-201ENST00000364738 ADAM32Q8TC27 787 aa6.01□□□□□ -1.45
RNU4-42P-201ENST00000364738 EPS8L1Q8TE68 723 aa6.01□□□□□ -1.45
RNU4-42P-201ENST00000364738 OCSTAMPQ9BR26 566 aa6.01□□□□□ -1.45
RNU4-42P-201ENST00000364738 DNMT3LQ9UJW3 386 aa6.01□□□□□ -1.45
RNU4-42P-201ENST00000364738 GPSM3Q9Y4H4 160 aa6.01□□□□□ -1.45
RNU4-42P-201ENST00000364738 SOS2Q07890 1332 aaPredicted RBP6□□□□□ -1.45
RNU4-42P-201ENST00000364738 NBPF20Q3BBV1 942 aa6□□□□□ -1.45
RNU4-42P-201ENST00000364738 INTS6LQ5JSJ4 861 aaKnown RBP6□□□□□ -1.45
RNU4-42P-201ENST00000364738 ZSCAN1Q8NBB4 408 aa6□□□□□ -1.45
RNU4-42P-201ENST00000364738 PCMTD1Q96MG8 357 aaPredicted RBP6□□□□□ -1.45
RNU4-42P-201ENST00000364738 FAM181BA6NEQ2 426 aa5.99□□□□□ -1.45
RNU4-42P-201ENST00000364738 TTLL8A6PVC2 850 aa5.99□□□□□ -1.45
RNU4-42P-201ENST00000364738 VSIG8P0DPA2 414 aa5.99□□□□□ -1.45
RNU4-42P-201ENST00000364738 NEUROD2Q15784 382 aa5.99□□□□□ -1.45
RNU4-42P-201ENST00000364738 PPFIA3O75145 1194 aa5.98□□□□□ -1.45
RNU4-42P-201ENST00000364738 RAB15P59190 212 aa5.98□□□□□ -1.45
RNU4-42P-201ENST00000364738 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.98□□□□□ -1.45
RNU4-42P-201ENST00000364738 Q6ZVU0 165 aa5.98□□□□□ -1.45
RNU4-42P-201ENST00000364738 SPINT1O43278 529 aa5.97□□□□□ -1.45
RNU4-42P-201ENST00000364738 DZIP3Q86Y13 1208 aaKnown RBP5.97□□□□□ -1.45
RNU4-42P-201ENST00000364738 AGBL1Q96MI9 1066 aa5.97□□□□□ -1.45
RNU4-42P-201ENST00000364738 GOPCQ9HD26 462 aa5.97□□□□□ -1.45
RNU4-42P-201ENST00000364738 FIGNL2A6NMB9 653 aa5.96□□□□□ -1.46
RNU4-42P-201ENST00000364738 LORP23490 312 aaPredicted RBP5.96□□□□□ -1.46
RNU4-42P-201ENST00000364738 RELBQ01201 579 aa5.96□□□□□ -1.46
RNU4-42P-201ENST00000364738 TRIM34Q9BYJ4 488 aa5.96□□□□□ -1.46
RNU4-42P-201ENST00000364738 PTSQ03393 145 aa5.95□□□□□ -1.46
RNU4-42P-201ENST00000364738 TMEM259Q4ZIN3 620 aa5.95□□□□□ -1.46
RNU4-42P-201ENST00000364738 ZNF784Q8NCA9 323 aaPredicted RBP5.95□□□□□ -1.46
RNU4-42P-201ENST00000364738 IL27Q8NEV9 243 aa5.95□□□□□ -1.46
RNU4-42P-201ENST00000364738 TMPRSS4Q9NRS4 437 aa5.95□□□□□ -1.46
RNU4-42P-201ENST00000364738 INSM2Q96T92 566 aaPredicted RBP5.94□□□□□ -1.46
RNU4-42P-201ENST00000364738 POLMQ9NP87 494 aaPredicted RBP5.94□□□□□ -1.46
RNU4-42P-201ENST00000364738 ERVH48-1M5A8F1 160 aa5.93□□□□□ -1.46
RNU4-42P-201ENST00000364738 ADH1AP07327 375 aa5.93□□□□□ -1.46
RNU4-42P-201ENST00000364738 CTSOP43234 321 aaPredicted RBP5.93□□□□□ -1.46
RNU4-42P-201ENST00000364738 ZNF395Q9H8N7 513 aaPredicted RBP5.93□□□□□ -1.46
RNU4-42P-201ENST00000364738 ZBBXA8MT70 800 aa5.92□□□□□ -1.46
RNU4-42P-201ENST00000364738 ESPNB1AK53 854 aa5.92□□□□□ -1.46
RNU4-42P-201ENST00000364738 CCDC155Q8N6L0 562 aa5.92□□□□□ -1.46
RNU4-42P-201ENST00000364738 PCDHB9Q9Y5E1 797 aa5.92□□□□□ -1.46
RNU4-42P-201ENST00000364738 LILRA1O75019 489 aa5.91□□□□□ -1.46
RNU4-42P-201ENST00000364738 FBXO45P0C2W1 286 aa5.91□□□□□ -1.46
RNU4-42P-201ENST00000364738 BRPF1P55201 1214 aaPredicted RBP5.91□□□□□ -1.46
RNU4-42P-201ENST00000364738 SEPT12Q8IYM1 358 aa5.91□□□□□ -1.46
RNU4-42P-201ENST00000364738 RNF217Q8TC41 542 aa5.91□□□□□ -1.46
RNU4-42P-201ENST00000364738 GJD4Q96KN9 370 aaPredicted RBP5.91□□□□□ -1.46
RNU4-42P-201ENST00000364738 CYLDQ9NQC7 956 aa5.91□□□□□ -1.46
RNU4-42P-201ENST00000364738 ADD1P35611 737 aaKnown RBP5.9□□□□□ -1.46
RNU4-42P-201ENST00000364738 CDC14CA4D256 554 aa5.89□□□□□ -1.47
RNU4-42P-201ENST00000364738 SLC35F4A4IF30 521 aa5.89□□□□□ -1.47
RNU4-42P-201ENST00000364738 ITGA6P23229 1130 aa5.89□□□□□ -1.47
RNU4-42P-201ENST00000364738 PTGIRP43119 386 aa5.89□□□□□ -1.47
RNU4-42P-201ENST00000364738 KRT76Q01546 638 aa5.89□□□□□ -1.47
RNU4-42P-201ENST00000364738 FOXD4L5Q5VV16 416 aaPredicted RBP5.89□□□□□ -1.47
RNU4-42P-201ENST00000364738 GPR161Q8N6U8 529 aaKnown RBP5.89□□□□□ -1.47
RNU4-42P-201ENST00000364738 TRIM52Q96A61 297 aa5.89□□□□□ -1.47
RNU4-42P-201ENST00000364738 GIGYF1O75420 1035 aaPredicted RBP5.88□□□□□ -1.47
RNU4-42P-201ENST00000364738 KDF1Q8NAX2 398 aaPredicted RBP5.88□□□□□ -1.47
RNU4-42P-201ENST00000364738 NANOS1Q8WY41 292 aaKnown RBP5.88□□□□□ -1.47
RNU4-42P-201ENST00000364738 CNTNAP3BQ96NU0 1288 aa5.88□□□□□ -1.47
RNU4-42P-201ENST00000364738 CNTNAP3Q9BZ76 1288 aa5.88□□□□□ -1.47
RNU4-42P-201ENST00000364738 COL25A1Q9BXS0 654 aaPredicted RBP5.87□□□□□ -1.47
RNU4-42P-201ENST00000364738 SENP3-EIF4A1A0A087X0R7 540 aa5.86□□□□□ -1.47
RNU4-42P-201ENST00000364738 ATP5J2-PTCD1G3V325 749 aa5.86□□□□□ -1.47
RNU4-42P-201ENST00000364738 NR1H3Q13133 447 aa5.86□□□□□ -1.47
RNU4-42P-201ENST00000364738 LYSMD3Q7Z3D4 306 aa5.86□□□□□ -1.47
RNU4-42P-201ENST00000364738 VWA5B2Q8N398 1253 aa5.86□□□□□ -1.47
RNU4-42P-201ENST00000364738 MTMR14Q8NCE2 650 aa5.86□□□□□ -1.47
RNU4-42P-201ENST00000364738 BANK1Q8NDB2 785 aa5.86□□□□□ -1.47
RNU4-42P-201ENST00000364738 NDUFB9Q9Y6M9 179 aa5.86□□□□□ -1.47
RNU4-42P-201ENST00000364738 APBB1O00213 710 aa5.85□□□□□ -1.47
RNU4-42P-201ENST00000364738 RNFT1Q5M7Z0 435 aa5.85□□□□□ -1.47
RNU4-42P-201ENST00000364738 RNF20Q5VTR2 975 aa5.85□□□□□ -1.47
RNU4-42P-201ENST00000364738 SV2AQ7L0J3 742 aa5.85□□□□□ -1.47
RNU4-42P-201ENST00000364738 PRICKLE2Q7Z3G6 844 aa5.85□□□□□ -1.47
RNU4-42P-201ENST00000364738 ZNF592Q92610 1267 aa5.85□□□□□ -1.47
RNU4-42P-201ENST00000364738 ZNF330Q9Y3S2 320 aaPredicted RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms