RNA–Protein interactions for RNA: ENST00000364426.1

RNU4-41P-201, Transcript of RNA, U4 small nuclear 41, pseudogene, humanhuman

BASIC

Gene RNU4-41P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-41P-201ENST00000364426 NR6A1Q15406 480 aa4.24□□□□□ -1.73
RNU4-41P-201ENST00000364426 OCSTAMPQ9BR26 566 aa4.24□□□□□ -1.73
RNU4-41P-201ENST00000364426 SOS2Q07890 1332 aaPredicted RBP4.23□□□□□ -1.73
RNU4-41P-201ENST00000364426 AP1G2O75843 785 aa4.23□□□□□ -1.73
RNU4-41P-201ENST00000364426 UPP2O95045 317 aa4.23□□□□□ -1.73
RNU4-41P-201ENST00000364426 USP17L8P0C7I0 530 aa4.23□□□□□ -1.73
RNU4-41P-201ENST00000364426 RFC5P40937 340 aa4.23□□□□□ -1.73
RNU4-41P-201ENST00000364426 PTK2Q05397 1052 aa4.23□□□□□ -1.73
RNU4-41P-201ENST00000364426 DHX9Q08211 1270 aaKnown RBP4.23□□□□□ -1.73
RNU4-41P-201ENST00000364426 Q6ZVU0 165 aa4.23□□□□□ -1.73
RNU4-41P-201ENST00000364426 PNMA1Q8ND90 353 aa4.23□□□□□ -1.73
RNU4-41P-201ENST00000364426 SLC10A4Q96EP9 437 aa4.23□□□□□ -1.73
RNU4-41P-201ENST00000364426 TSEN34Q9BSV6 310 aaKnown RBP4.23□□□□□ -1.73
RNU4-41P-201ENST00000364426 CARD14Q9BXL6 1004 aa4.23□□□□□ -1.73
RNU4-41P-201ENST00000364426 PGPEP1Q9NXJ5 209 aa4.23□□□□□ -1.73
RNU4-41P-201ENST00000364426 LORP23490 312 aaPredicted RBP4.22□□□□□ -1.73
RNU4-41P-201ENST00000364426 GMPRP36959 345 aa4.22□□□□□ -1.73
RNU4-41P-201ENST00000364426 PPP1R26Q5T8A7 1209 aaPredicted RBP4.22□□□□□ -1.73
RNU4-41P-201ENST00000364426 ZBTB33Q86T24 672 aa4.22□□□□□ -1.73
RNU4-41P-201ENST00000364426 KCTD15Q96SI1 283 aaPredicted RBP4.22□□□□□ -1.73
RNU4-41P-201ENST00000364426 HMX1Q9NP08 348 aaPredicted RBP4.22□□□□□ -1.73
RNU4-41P-201ENST00000364426 ERBB4Q15303 1308 aa4.21□□□□□ -1.73
RNU4-41P-201ENST00000364426 SPINT1O43278 529 aa4.21□□□□□ -1.74
RNU4-41P-201ENST00000364426 MAN1A2O60476 641 aa4.21□□□□□ -1.74
RNU4-41P-201ENST00000364426 BMP2P12643 396 aa4.21□□□□□ -1.74
RNU4-41P-201ENST00000364426 NBPF20Q3BBV1 942 aa4.21□□□□□ -1.74
RNU4-41P-201ENST00000364426 TMEM259Q4ZIN3 620 aa4.21□□□□□ -1.74
RNU4-41P-201ENST00000364426 INTS6LQ5JSJ4 861 aaKnown RBP4.21□□□□□ -1.74
RNU4-41P-201ENST00000364426 C6orf118Q5T5N4 469 aa4.21□□□□□ -1.74
RNU4-41P-201ENST00000364426 ADAM32Q8TC27 787 aa4.21□□□□□ -1.74
RNU4-41P-201ENST00000364426 DNMT3LQ9UJW3 386 aa4.21□□□□□ -1.74
RNU4-41P-201ENST00000364426 SOBPA7XYQ1 873 aa4.2□□□□□ -1.74
RNU4-41P-201ENST00000364426 ESPNB1AK53 854 aa4.2□□□□□ -1.74
RNU4-41P-201ENST00000364426 SOCS7O14512 581 aa4.2□□□□□ -1.74
RNU4-41P-201ENST00000364426 EPS8L1Q8TE68 723 aa4.2□□□□□ -1.74
RNU4-41P-201ENST00000364426 PCMTD1Q96MG8 357 aaPredicted RBP4.2□□□□□ -1.74
RNU4-41P-201ENST00000364426 TRIM34Q9BYJ4 488 aa4.2□□□□□ -1.74
RNU4-41P-201ENST00000364426 FAM181BA6NEQ2 426 aa4.19□□□□□ -1.74
RNU4-41P-201ENST00000364426 TTLL8A6PVC2 850 aa4.19□□□□□ -1.74
RNU4-41P-201ENST00000364426 PPFIA3O75145 1194 aa4.19□□□□□ -1.74
RNU4-41P-201ENST00000364426 VEGFBP49765 207 aa4.19□□□□□ -1.74
RNU4-41P-201ENST00000364426 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.19□□□□□ -1.74
RNU4-41P-201ENST00000364426 SEPT12Q8IYM1 358 aa4.19□□□□□ -1.74
RNU4-41P-201ENST00000364426 ZSCAN1Q8NBB4 408 aa4.19□□□□□ -1.74
RNU4-41P-201ENST00000364426 CBLBQ13191 982 aa4.18□□□□□ -1.74
RNU4-41P-201ENST00000364426 CCDC125Q86Z20 511 aa4.18□□□□□ -1.74
RNU4-41P-201ENST00000364426 GJD4Q96KN9 370 aaPredicted RBP4.18□□□□□ -1.74
RNU4-41P-201ENST00000364426 ATP1B4Q9UN42 357 aaPredicted RBP4.18□□□□□ -1.74
RNU4-41P-201ENST00000364426 LILRA1O75019 489 aa4.17□□□□□ -1.74
RNU4-41P-201ENST00000364426 BRPF1P55201 1214 aaPredicted RBP4.17□□□□□ -1.74
RNU4-41P-201ENST00000364426 NEUROD2Q15784 382 aa4.17□□□□□ -1.74
RNU4-41P-201ENST00000364426 DZIP3Q86Y13 1208 aaKnown RBP4.17□□□□□ -1.74
RNU4-41P-201ENST00000364426 BANK1Q8NDB2 785 aa4.17□□□□□ -1.74
RNU4-41P-201ENST00000364426 NANOS1Q8WY41 292 aaKnown RBP4.17□□□□□ -1.74
RNU4-41P-201ENST00000364426 TRIM52Q96A61 297 aa4.17□□□□□ -1.74
RNU4-41P-201ENST00000364426 SLC35F4A4IF30 521 aa4.16□□□□□ -1.74
RNU4-41P-201ENST00000364426 ZBBXA8MT70 800 aa4.16□□□□□ -1.74
RNU4-41P-201ENST00000364426 ERVH48-1M5A8F1 160 aa4.16□□□□□ -1.74
RNU4-41P-201ENST00000364426 ADH1AP07327 375 aa4.16□□□□□ -1.74
RNU4-41P-201ENST00000364426 PTSQ03393 145 aa4.16□□□□□ -1.74
RNU4-41P-201ENST00000364426 ZNF784Q8NCA9 323 aaPredicted RBP4.16□□□□□ -1.74
RNU4-41P-201ENST00000364426 ADD1P35611 737 aaKnown RBP4.15□□□□□ -1.75
RNU4-41P-201ENST00000364426 CTSOP43234 321 aaPredicted RBP4.15□□□□□ -1.75
RNU4-41P-201ENST00000364426 MCCD1P59942 119 aaPredicted RBP4.15□□□□□ -1.75
RNU4-41P-201ENST00000364426 KDF1Q8NAX2 398 aaPredicted RBP4.15□□□□□ -1.75
RNU4-41P-201ENST00000364426 IL27Q8NEV9 243 aa4.15□□□□□ -1.75
RNU4-41P-201ENST00000364426 RNF217Q8TC41 542 aa4.15□□□□□ -1.75
RNU4-41P-201ENST00000364426 ZNF592Q92610 1267 aa4.15□□□□□ -1.75
RNU4-41P-201ENST00000364426 TMPRSS4Q9NRS4 437 aa4.15□□□□□ -1.75
RNU4-41P-201ENST00000364426 GPR37L1O60883 481 aa4.14□□□□□ -1.75
RNU4-41P-201ENST00000364426 FBXO45P0C2W1 286 aa4.14□□□□□ -1.75
RNU4-41P-201ENST00000364426 PTGIRP43119 386 aa4.14□□□□□ -1.75
RNU4-41P-201ENST00000364426 CCDC155Q8N6L0 562 aa4.14□□□□□ -1.75
RNU4-41P-201ENST00000364426 AGBL1Q96MI9 1066 aa4.14□□□□□ -1.75
RNU4-41P-201ENST00000364426 INSM2Q96T92 566 aaPredicted RBP4.14□□□□□ -1.75
RNU4-41P-201ENST00000364426 FIGNL2A6NMB9 653 aa4.13□□□□□ -1.75
RNU4-41P-201ENST00000364426 APBB1O00213 710 aa4.13□□□□□ -1.75
RNU4-41P-201ENST00000364426 ITGA6P23229 1130 aa4.13□□□□□ -1.75
RNU4-41P-201ENST00000364426 RELBQ01201 579 aa4.13□□□□□ -1.75
RNU4-41P-201ENST00000364426 KRT76Q01546 638 aa4.13□□□□□ -1.75
RNU4-41P-201ENST00000364426 NR1H3Q13133 447 aa4.13□□□□□ -1.75
RNU4-41P-201ENST00000364426 FOXD4L5Q5VV16 416 aaPredicted RBP4.13□□□□□ -1.75
RNU4-41P-201ENST00000364426 GPR161Q8N6U8 529 aaKnown RBP4.13□□□□□ -1.75
RNU4-41P-201ENST00000364426 SENP3-EIF4A1A0A087X0R7 540 aa4.12□□□□□ -1.75
RNU4-41P-201ENST00000364426 GIGYF1O75420 1035 aaPredicted RBP4.12□□□□□ -1.75
RNU4-41P-201ENST00000364426 GPC1P35052 558 aa4.12□□□□□ -1.75
RNU4-41P-201ENST00000364426 RNF144AP50876 292 aaPredicted RBP4.12□□□□□ -1.75
RNU4-41P-201ENST00000364426 ERVK-9P63128 1117 aa4.12□□□□□ -1.75
RNU4-41P-201ENST00000364426 RNF20Q5VTR2 975 aa4.12□□□□□ -1.75
RNU4-41P-201ENST00000364426 MTMR14Q8NCE2 650 aa4.12□□□□□ -1.75
RNU4-41P-201ENST00000364426 ZNF395Q9H8N7 513 aaPredicted RBP4.12□□□□□ -1.75
RNU4-41P-201ENST00000364426 POLMQ9NP87 494 aaPredicted RBP4.12□□□□□ -1.75
RNU4-41P-201ENST00000364426 NDUFB9Q9Y6M9 179 aa4.12□□□□□ -1.75
RNU4-41P-201ENST00000364426 SLURP2P0DP57 97 aa4.11□□□□□ -1.75
RNU4-41P-201ENST00000364426 RAB15P59190 212 aa4.11□□□□□ -1.75
RNU4-41P-201ENST00000364426 LYSMD3Q7Z3D4 306 aa4.11□□□□□ -1.75
RNU4-41P-201ENST00000364426 ZNF330Q9Y3S2 320 aaPredicted RBP4.11□□□□□ -1.75
RNU4-41P-201ENST00000364426 PCDHB9Q9Y5E1 797 aa4.11□□□□□ -1.75
RNU4-41P-201ENST00000364426 ATP5J2-PTCD1G3V325 749 aa4.1□□□□□ -1.75
RNU4-41P-201ENST00000364426 TRAK2O60296 914 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms