RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 NBPF20Q3BBV1 942 aa8.98□□□□□ -0.97
RNU6-553P-201ENST00000364047 CCDC116Q8IYX3 515 aa8.97□□□□□ -0.97
RNU6-553P-201ENST00000364047 PCDHB9Q9Y5E1 797 aa8.97□□□□□ -0.97
RNU6-553P-201ENST00000364047 ZIC2O95409 532 aaPredicted RBP8.96□□□□□ -0.98
RNU6-553P-201ENST00000364047 ZNF787Q6DD87 383 aa8.96□□□□□ -0.98
RNU6-553P-201ENST00000364047 ITPKCQ96DU7 683 aa8.96□□□□□ -0.98
RNU6-553P-201ENST00000364047 KLF16Q9BXK1 252 aaPredicted RBP8.96□□□□□ -0.98
RNU6-553P-201ENST00000364047 ZFAND3Q9H8U3 227 aa8.96□□□□□ -0.98
RNU6-553P-201ENST00000364047 GDPD2Q9HCC8 539 aa8.96□□□□□ -0.98
RNU6-553P-201ENST00000364047 ATP13A2Q9NQ11 1180 aa8.96□□□□□ -0.98
RNU6-553P-201ENST00000364047 INTS6LQ5JSJ4 861 aaKnown RBP8.95□□□□□ -0.98
RNU6-553P-201ENST00000364047 EMILIN1Q9Y6C2 1016 aa8.95□□□□□ -0.98
RNU6-553P-201ENST00000364047 POTECB2RU33 542 aa8.94□□□□□ -0.98
RNU6-553P-201ENST00000364047 BMP1P13497 986 aa8.94□□□□□ -0.98
RNU6-553P-201ENST00000364047 ABL2P42684 1182 aa8.94□□□□□ -0.98
RNU6-553P-201ENST00000364047 RAB15P59190 212 aa8.94□□□□□ -0.98
RNU6-553P-201ENST00000364047 FLIIQ13045 1269 aa8.94□□□□□ -0.98
RNU6-553P-201ENST00000364047 PPP1R26Q5T8A7 1209 aaPredicted RBP8.94□□□□□ -0.98
RNU6-553P-201ENST00000364047 GMPR2Q9P2T1 348 aaKnown RBP8.94□□□□□ -0.98
RNU6-553P-201ENST00000364047 ZNF330Q9Y3S2 320 aaPredicted RBP8.94□□□□□ -0.98
RNU6-553P-201ENST00000364047 DHX9Q08211 1270 aaKnown RBP8.93□□□□□ -0.98
RNU6-553P-201ENST00000364047 IRF5Q13568 498 aa8.93□□□□□ -0.98
RNU6-553P-201ENST00000364047 ZNF592Q92610 1267 aa8.92□□□□□ -0.98
RNU6-553P-201ENST00000364047 PGPEP1Q9NXJ5 209 aa8.92□□□□□ -0.98
RNU6-553P-201ENST00000364047 ESPNB1AK53 854 aa8.91□□□□□ -0.98
RNU6-553P-201ENST00000364047 TRIM46Q7Z4K8 759 aa8.91□□□□□ -0.98
RNU6-553P-201ENST00000364047 C11orf95C9JLR9 678 aaPredicted RBP8.9□□□□□ -0.98
RNU6-553P-201ENST00000364047 GIGYF1O75420 1035 aaPredicted RBP8.9□□□□□ -0.98
RNU6-553P-201ENST00000364047 UBTFP17480 764 aaKnown RBP8.9□□□□□ -0.98
RNU6-553P-201ENST00000364047 SENP2Q9HC62 589 aa8.9□□□□□ -0.98
RNU6-553P-201ENST00000364047 COG6Q9Y2V7 657 aa8.9□□□□□ -0.98
RNU6-553P-201ENST00000364047 MCCD1P59942 119 aaPredicted RBP8.89□□□□□ -0.99
RNU6-553P-201ENST00000364047 VAC14Q08AM6 782 aa8.89□□□□□ -0.99
RNU6-553P-201ENST00000364047 MRPL14Q6P1L8 145 aaKnown RBP8.89□□□□□ -0.99
RNU6-553P-201ENST00000364047 SEPT12Q8IYM1 358 aa8.89□□□□□ -0.99
RNU6-553P-201ENST00000364047 MEIOBQ8N635 442 aa8.89□□□□□ -0.99
RNU6-553P-201ENST00000364047 ERVH48-1M5A8F1 160 aa8.88□□□□□ -0.99
RNU6-553P-201ENST00000364047 RAD21O60216 631 aa8.88□□□□□ -0.99
RNU6-553P-201ENST00000364047 EIF4G2P78344 907 aaKnown RBP eCLIP8.88□□□□□ -0.99
RNU6-553P-201ENST00000364047 SCARF1Q14162 830 aa8.88□□□□□ -0.99
RNU6-553P-201ENST00000364047 POM121Q96HA1 1249 aa8.88□□□□□ -0.99
RNU6-553P-201ENST00000364047 TMPRSS4Q9NRS4 437 aa8.88□□□□□ -0.99
RNU6-553P-201ENST00000364047 UPP2O95045 317 aa8.87□□□□□ -0.99
RNU6-553P-201ENST00000364047 WASHC4Q2M389 1173 aa8.87□□□□□ -0.99
RNU6-553P-201ENST00000364047 KIFC2Q96AC6 838 aa8.87□□□□□ -0.99
RNU6-553P-201ENST00000364047 TRIM47Q96LD4 638 aa8.87□□□□□ -0.99
RNU6-553P-201ENST00000364047 ZFP42Q96MM3 310 aa8.87□□□□□ -0.99
RNU6-553P-201ENST00000364047 PURBQ96QR8 312 aaKnown RBP8.87□□□□□ -0.99
RNU6-553P-201ENST00000364047 SNRPBP14678 240 aaKnown RBP8.86□□□□□ -0.99
RNU6-553P-201ENST00000364047 CBLBQ13191 982 aa8.86□□□□□ -0.99
RNU6-553P-201ENST00000364047 C6orf118Q5T5N4 469 aa8.86□□□□□ -0.99
RNU6-553P-201ENST00000364047 RNF20Q5VTR2 975 aa8.86□□□□□ -0.99
RNU6-553P-201ENST00000364047 ZNF784Q8NCA9 323 aaPredicted RBP8.86□□□□□ -0.99
RNU6-553P-201ENST00000364047 WWC1Q8IX03 1113 aa8.85□□□□□ -0.99
RNU6-553P-201ENST00000364047 LINC00528Q8N1L1 170 aa8.85□□□□□ -0.99
RNU6-553P-201ENST00000364047 BMP2P12643 396 aa8.84□□□□□ -0.99
RNU6-553P-201ENST00000364047 Q6ZVU0 165 aa8.84□□□□□ -0.99
RNU6-553P-201ENST00000364047 TSEN34Q9BSV6 310 aaKnown RBP8.84□□□□□ -0.99
RNU6-553P-201ENST00000364047 CYLDQ9NQC7 956 aa8.84□□□□□ -0.99
RNU6-553P-201ENST00000364047 CEP126Q9P2H0 1117 aa8.84□□□□□ -0.99
RNU6-553P-201ENST00000364047 CCDC125Q86Z20 511 aa8.83□□□□□ -1
RNU6-553P-201ENST00000364047 TRIM52Q96A61 297 aa8.82□□□□□ -1
RNU6-553P-201ENST00000364047 PCDHB11Q9Y5F2 797 aa8.82□□□□□ -1
RNU6-553P-201ENST00000364047 LILRA1O75019 489 aa8.81□□□□□ -1
RNU6-553P-201ENST00000364047 ADD1P35611 737 aaKnown RBP8.81□□□□□ -1
RNU6-553P-201ENST00000364047 RELBQ01201 579 aa8.81□□□□□ -1
RNU6-553P-201ENST00000364047 AGBL1Q96MI9 1066 aa8.81□□□□□ -1
RNU6-553P-201ENST00000364047 ADH1AP07327 375 aa8.8□□□□□ -1
RNU6-553P-201ENST00000364047 SOX11P35716 441 aa8.8□□□□□ -1
RNU6-553P-201ENST00000364047 SEMA3FQ13275 785 aa8.8□□□□□ -1
RNU6-553P-201ENST00000364047 SLFNL1Q499Z3 407 aa8.79□□□□□ -1
RNU6-553P-201ENST00000364047 CLUAP1Q96AJ1 413 aa8.79□□□□□ -1
RNU6-553P-201ENST00000364047 CC2D2BQ6DHV5 1058 aa8.78□□□□□ -1
RNU6-553P-201ENST00000364047 RNF135Q8IUD6 432 aa8.78□□□□□ -1
RNU6-553P-201ENST00000364047 ZNF775Q96BV0 537 aaPredicted RBP8.78□□□□□ -1
RNU6-553P-201ENST00000364047 CCDC85AQ96PX6 553 aaPredicted RBP8.78□□□□□ -1
RNU6-553P-201ENST00000364047 SPINT1O43278 529 aa8.77□□□□□ -1.01
RNU6-553P-201ENST00000364047 MAN1A2O60476 641 aa8.77□□□□□ -1.01
RNU6-553P-201ENST00000364047 SCTRP47872 440 aa8.77□□□□□ -1.01
RNU6-553P-201ENST00000364047 ERVK-9P63128 1117 aa8.77□□□□□ -1.01
RNU6-553P-201ENST00000364047 SOBPA7XYQ1 873 aa8.76□□□□□ -1.01
RNU6-553P-201ENST00000364047 ESF1Q9H501 851 aaKnown RBP8.76□□□□□ -1.01
RNU6-553P-201ENST00000364047 ZNF395Q9H8N7 513 aaPredicted RBP8.76□□□□□ -1.01
RNU6-553P-201ENST00000364047 SOS2Q07890 1332 aaPredicted RBP8.76□□□□□ -1.01
RNU6-553P-201ENST00000364047 TTLL8A6PVC2 850 aa8.75□□□□□ -1.01
RNU6-553P-201ENST00000364047 POM121CA8CG34 1229 aa8.75□□□□□ -1.01
RNU6-553P-201ENST00000364047 ATP5J2-PTCD1G3V325 749 aa8.75□□□□□ -1.01
RNU6-553P-201ENST00000364047 PTGIRP43119 386 aa8.75□□□□□ -1.01
RNU6-553P-201ENST00000364047 PROSER2Q86WR7 435 aaPredicted RBP8.75□□□□□ -1.01
RNU6-553P-201ENST00000364047 PHTF2Q8N3S3 785 aa8.75□□□□□ -1.01
RNU6-553P-201ENST00000364047 KDF1Q8NAX2 398 aaPredicted RBP8.75□□□□□ -1.01
RNU6-553P-201ENST00000364047 INSM2Q96T92 566 aaPredicted RBP8.75□□□□□ -1.01
RNU6-553P-201ENST00000364047 CDCA7Q9BWT1 371 aaPredicted RBP8.75□□□□□ -1.01
RNU6-553P-201ENST00000364047 DOLKQ9UPQ8 538 aa8.75□□□□□ -1.01
RNU6-553P-201ENST00000364047 ALG2Q9H553 416 aa8.74□□□□□ -1.01
RNU6-553P-201ENST00000364047 POLMQ9NP87 494 aaPredicted RBP8.74□□□□□ -1.01
RNU6-553P-201ENST00000364047 DNMT3LQ9UJW3 386 aa8.74□□□□□ -1.01
RNU6-553P-201ENST00000364047 MYCP01106 439 aaPredicted RBP8.73□□□□□ -1.01
RNU6-553P-201ENST00000364047 CTSOP43234 321 aaPredicted RBP8.73□□□□□ -1.01
RNU6-553P-201ENST00000364047 TSGA10IPQ3SY00 556 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms