RNA–Protein interactions for RNA: ENST00000363016.1

RNU6-249P-201, Transcript of RNA, U6 small nuclear 249, pseudogene, humanhuman

BASIC

Gene RNU6-249P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-249P-201ENST00000363016 PRM3Q9NNZ6 103 aa6.55□□□□□ -1.36
RNU6-249P-201ENST00000363016 DDX56Q9NY93 547 aaKnown RBP6.55□□□□□ -1.36
RNU6-249P-201ENST00000363016 TBC1D2BQ9UPU7 963 aa6.55□□□□□ -1.36
RNU6-249P-201ENST00000363016 CHMP3Q9Y3E7 222 aa6.55□□□□□ -1.36
RNU6-249P-201ENST00000363016 GOLGA6L6A8MZA4 724 aa6.54□□□□□ -1.36
RNU6-249P-201ENST00000363016 SMAPO00193 183 aa6.54□□□□□ -1.36
RNU6-249P-201ENST00000363016 NPHP1O15259 732 aa6.54□□□□□ -1.36
RNU6-249P-201ENST00000363016 ATICP31939 592 aa6.54□□□□□ -1.36
RNU6-249P-201ENST00000363016 KIAA2012Q0VF49 1180 aa6.54□□□□□ -1.36
RNU6-249P-201ENST00000363016 PSMD2Q13200 908 aa6.54□□□□□ -1.36
RNU6-249P-201ENST00000363016 ENOX2Q16206 610 aaKnown RBP6.54□□□□□ -1.36
RNU6-249P-201ENST00000363016 CC2D1AQ6P1N0 951 aaPredicted RBP6.54□□□□□ -1.36
RNU6-249P-201ENST00000363016 NLGN1Q8N2Q7 840 aa6.54□□□□□ -1.36
RNU6-249P-201ENST00000363016 TTC30BQ8N4P2 665 aa6.54□□□□□ -1.36
RNU6-249P-201ENST00000363016 JDP2Q8WYK2 163 aa6.54□□□□□ -1.36
RNU6-249P-201ENST00000363016 RSPH1Q8WYR4 309 aa6.54□□□□□ -1.36
RNU6-249P-201ENST00000363016 CCDC102AQ96A19 550 aa6.54□□□□□ -1.36
RNU6-249P-201ENST00000363016 AGBL1Q96MI9 1066 aa6.54□□□□□ -1.36
RNU6-249P-201ENST00000363016 IFT57Q9NWB7 429 aa6.54□□□□□ -1.36
RNU6-249P-201ENST00000363016 AKAP2Q9Y2D5 859 aa6.54□□□□□ -1.36
RNU6-249P-201ENST00000363016 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.53□□□□□ -1.36
RNU6-249P-201ENST00000363016 ANKRD33BA6NCL7 494 aa6.53□□□□□ -1.36
RNU6-249P-201ENST00000363016 TMEM88BA6NKF7 163 aa6.53□□□□□ -1.36
RNU6-249P-201ENST00000363016 IRF6O14896 467 aa6.53□□□□□ -1.36
RNU6-249P-201ENST00000363016 CT47B1P0C2W7 299 aaPredicted RBP6.53□□□□□ -1.36
RNU6-249P-201ENST00000363016 TDO2P48775 406 aa6.53□□□□□ -1.36
RNU6-249P-201ENST00000363016 TERF1P54274 439 aa6.53□□□□□ -1.36
RNU6-249P-201ENST00000363016 SRPK2P78362 688 aaKnown RBP6.53□□□□□ -1.36
RNU6-249P-201ENST00000363016 NFE2L2Q16236 605 aa6.53□□□□□ -1.36
RNU6-249P-201ENST00000363016 CCSAPQ6IQ19 270 aaPredicted RBP6.53□□□□□ -1.36
RNU6-249P-201ENST00000363016 HSCBQ8IWL3 235 aa6.53□□□□□ -1.36
RNU6-249P-201ENST00000363016 MPNDQ8N594 471 aa6.53□□□□□ -1.36
RNU6-249P-201ENST00000363016 BANK1Q8NDB2 785 aa6.53□□□□□ -1.36
RNU6-249P-201ENST00000363016 VPS37AQ8NEZ2 397 aa6.53□□□□□ -1.36
RNU6-249P-201ENST00000363016 PMFBP1Q8TBY8 1022 aa6.53□□□□□ -1.36
RNU6-249P-201ENST00000363016 CASS4Q9NQ75 786 aa6.53□□□□□ -1.36
RNU6-249P-201ENST00000363016 IQSEC3Q9UPP2 1182 aaPredicted RBP6.53□□□□□ -1.36
RNU6-249P-201ENST00000363016 DNAJC6O75061 913 aa6.52□□□□□ -1.37
RNU6-249P-201ENST00000363016 LDHAP00338 332 aaKnown RBP6.52□□□□□ -1.37
RNU6-249P-201ENST00000363016 FGAP02671 866 aa6.52□□□□□ -1.37
RNU6-249P-201ENST00000363016 LDHCP07864 332 aa6.52□□□□□ -1.37
RNU6-249P-201ENST00000363016 COL6A1P12109 1028 aa6.52□□□□□ -1.37
RNU6-249P-201ENST00000363016 CASQ1P31415 396 aa6.52□□□□□ -1.37
RNU6-249P-201ENST00000363016 BMS1Q14692 1282 aaKnown RBP6.52□□□□□ -1.37
RNU6-249P-201ENST00000363016 HSP90B2PQ58FF3 399 aa6.52□□□□□ -1.37
RNU6-249P-201ENST00000363016 CFAP70Q5T0N1 1121 aa6.52□□□□□ -1.37
RNU6-249P-201ENST00000363016 ZNF512BQ96KM6 892 aaPredicted RBP6.52□□□□□ -1.37
RNU6-249P-201ENST00000363016 C8orf48Q96LL4 319 aa6.52□□□□□ -1.37
RNU6-249P-201ENST00000363016 FAM210AQ96ND0 272 aa6.52□□□□□ -1.37
RNU6-249P-201ENST00000363016 FMNL2Q96PY5 1086 aa6.52□□□□□ -1.37
RNU6-249P-201ENST00000363016 CEP89Q96ST8 783 aa6.52□□□□□ -1.37
RNU6-249P-201ENST00000363016 PIF1Q9H611 641 aa6.52□□□□□ -1.37
RNU6-249P-201ENST00000363016 SUDS3Q9H7L9 328 aaPredicted RBP6.52□□□□□ -1.37
RNU6-249P-201ENST00000363016 GDPD2Q9HCC8 539 aa6.52□□□□□ -1.37
RNU6-249P-201ENST00000363016 NLRP2Q9NX02 1062 aa6.52□□□□□ -1.37
RNU6-249P-201ENST00000363016 ODF2LQ9ULJ1 636 aa6.52□□□□□ -1.37
RNU6-249P-201ENST00000363016 POM121CA8CG34 1229 aa6.51□□□□□ -1.37
RNU6-249P-201ENST00000363016 SCAMP3O14828 347 aaKnown RBP6.51□□□□□ -1.37
RNU6-249P-201ENST00000363016 USP5P45974 858 aa6.51□□□□□ -1.37
RNU6-249P-201ENST00000363016 HMGN5P82970 282 aaKnown RBP6.51□□□□□ -1.37
RNU6-249P-201ENST00000363016 SATB1Q01826 763 aa6.51□□□□□ -1.37
RNU6-249P-201ENST00000363016 MAP2K5Q13163 448 aa6.51□□□□□ -1.37
RNU6-249P-201ENST00000363016 NEUROD1Q13562 356 aa6.51□□□□□ -1.37
RNU6-249P-201ENST00000363016 NOM1Q5C9Z4 860 aaKnown RBP6.51□□□□□ -1.37
RNU6-249P-201ENST00000363016 MSL1Q68DK7 614 aa6.51□□□□□ -1.37
RNU6-249P-201ENST00000363016 CCDC89Q8N998 374 aa6.51□□□□□ -1.37
RNU6-249P-201ENST00000363016 SVIPQ8NHG7 77 aa6.51□□□□□ -1.37
RNU6-249P-201ENST00000363016 CCDC47Q96A33 483 aaKnown RBP6.51□□□□□ -1.37
RNU6-249P-201ENST00000363016 ZBTB12Q9Y330 459 aaPredicted RBP6.51□□□□□ -1.37
RNU6-249P-201ENST00000363016 PABPN1LA6NDY0 278 aaKnown RBP6.5□□□□□ -1.37
RNU6-249P-201ENST00000363016 HIP1RO75146 1068 aa6.5□□□□□ -1.37
RNU6-249P-201ENST00000363016 FOSP01100 380 aaPredicted RBP6.5□□□□□ -1.37
RNU6-249P-201ENST00000363016 ABL2P42684 1182 aa6.5□□□□□ -1.37
RNU6-249P-201ENST00000363016 MAP9Q49MG5 647 aa6.5□□□□□ -1.37
RNU6-249P-201ENST00000363016 TTC39BQ5VTQ0 682 aaPredicted RBP6.5□□□□□ -1.37
RNU6-249P-201ENST00000363016 ZNF746Q6NUN9 644 aaPredicted RBP6.5□□□□□ -1.37
RNU6-249P-201ENST00000363016 LCA5Q86VQ0 697 aa6.5□□□□□ -1.37
RNU6-249P-201ENST00000363016 ANKRD13BQ86YJ7 626 aa6.5□□□□□ -1.37
RNU6-249P-201ENST00000363016 OGFOD1Q8N543 542 aa6.5□□□□□ -1.37
RNU6-249P-201ENST00000363016 SLC43A3Q8NBI5 491 aa6.5□□□□□ -1.37
RNU6-249P-201ENST00000363016 CXorf56Q9H5V9 222 aa6.5□□□□□ -1.37
RNU6-249P-201ENST00000363016 RETREG1Q9H6L5 497 aa6.5□□□□□ -1.37
RNU6-249P-201ENST00000363016 SNRKQ9NRH2 765 aa6.5□□□□□ -1.37
RNU6-249P-201ENST00000363016 TMEM51Q9NW97 253 aa6.5□□□□□ -1.37
RNU6-249P-201ENST00000363016 KLF15Q9UIH9 416 aa6.5□□□□□ -1.37
RNU6-249P-201ENST00000363016 SMC3Q9UQE7 1217 aa6.5□□□□□ -1.37
RNU6-249P-201ENST00000363016 GOLGA6L22H0YM25 854 aa6.49□□□□□ -1.37
RNU6-249P-201ENST00000363016 IFRD1O00458 451 aaPredicted RBP6.49□□□□□ -1.37
RNU6-249P-201ENST00000363016 NEFHP12036 1026 aa6.49□□□□□ -1.37
RNU6-249P-201ENST00000363016 MLLT3P42568 568 aaPredicted RBP6.49□□□□□ -1.37
RNU6-249P-201ENST00000363016 BRD3Q15059 726 aa6.49□□□□□ -1.37
RNU6-249P-201ENST00000363016 VPS72Q15906 364 aa6.49□□□□□ -1.37
RNU6-249P-201ENST00000363016 CCDC184Q52MB2 194 aa6.49□□□□□ -1.37
RNU6-249P-201ENST00000363016 C9orf131Q5VYM1 1079 aa6.49□□□□□ -1.37
RNU6-249P-201ENST00000363016 KLHL10Q6JEL2 608 aa6.49□□□□□ -1.37
RNU6-249P-201ENST00000363016 CCDC73Q6ZRK6 1079 aa6.49□□□□□ -1.37
RNU6-249P-201ENST00000363016 LMNTD2Q8IXW0 634 aa6.49□□□□□ -1.37
RNU6-249P-201ENST00000363016 RELTQ969Z4 430 aa6.49□□□□□ -1.37
RNU6-249P-201ENST00000363016 FRMD6Q96NE9 622 aa6.49□□□□□ -1.37
RNU6-249P-201ENST00000363016 MPHOSPH6Q99547 160 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms