RNA–Protein interactions for RNA: ENST00000356534.7

CHRD-203, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 1,252 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-203ENST00000356534 UPF1Q92900 1129 aaKnown RBP eCLIP28.3■■■□□ 2.12
CHRD-203ENST00000356534 CRB1P82279 1406 aa28.28■■■□□ 2.12
CHRD-203ENST00000356534 SOX12O15370 315 aa28.28■■■□□ 2.12
CHRD-203ENST00000356534 FAM98CQ17RN3 349 aaKnown RBP28.28■■■□□ 2.12
CHRD-203ENST00000356534 PARP4Q9UKK3 1724 aaKnown RBP28.27■■■□□ 2.12
CHRD-203ENST00000356534 FAM208AQ9UK61 1670 aaKnown RBP28.27■■■□□ 2.12
CHRD-203ENST00000356534 COG3Q96JB2 828 aa28.27■■■□□ 2.12
CHRD-203ENST00000356534 ZRANB1Q9UGI0 708 aa28.25■■■□□ 2.11
CHRD-203ENST00000356534 THRAP3Q9Y2W1 955 aaKnown RBP28.25■■■□□ 2.11
CHRD-203ENST00000356534 ANKRD26Q9UPS8 1709 aa28.25■■■□□ 2.11
CHRD-203ENST00000356534 LARP1Q6PKG0 1096 aaKnown RBP28.23■■■□□ 2.11
CHRD-203ENST00000356534 BARGINQ6ZT62 677 aa28.23■■■□□ 2.11
CHRD-203ENST00000356534 WDR17Q8IZU2 1322 aa28.22■■■□□ 2.11
CHRD-203ENST00000356534 KRT27Q7Z3Y8 459 aa28.22■■■□□ 2.11
CHRD-203ENST00000356534 TCP11L2Q8N4U5 519 aa28.22■■■□□ 2.11
CHRD-203ENST00000356534 NSD3Q9BZ95 1437 aa28.22■■■□□ 2.11
CHRD-203ENST00000356534 POLR3GLQ9BT43 218 aa28.21■■■□□ 2.11
CHRD-203ENST00000356534 BLMP54132 1417 aaPredicted RBP28.19■■■□□ 2.1
CHRD-203ENST00000356534 RGPD1P0DJD0 1748 aa28.19■■■□□ 2.1
CHRD-203ENST00000356534 USP35Q9P2H5 1018 aa28.19■■■□□ 2.1
CHRD-203ENST00000356534 EP400Q96L91 3159 aa28.19■■■□□ 2.1
CHRD-203ENST00000356534 TOM1L2Q6ZVM7 507 aa28.18■■■□□ 2.1
CHRD-203ENST00000356534 CCDC125Q86Z20 511 aa28.18■■■□□ 2.1
CHRD-203ENST00000356534 FYB1O15117 783 aa28.16■■■□□ 2.1
CHRD-203ENST00000356534 AXIN2Q9Y2T1 843 aa28.16■■■□□ 2.1
CHRD-203ENST00000356534 LRRC37A3O60309 1634 aa28.15■■■□□ 2.1
CHRD-203ENST00000356534 CSB-PGBD3P0DP91 1061 aa28.15■■■□□ 2.1
CHRD-203ENST00000356534 RTL1A6NKG5 1358 aa28.14■■■□□ 2.1
CHRD-203ENST00000356534 CCDC7Q96M83 1385 aa28.14■■■□□ 2.1
CHRD-203ENST00000356534 CGNL1Q0VF96 1302 aa28.14■■■□□ 2.09
CHRD-203ENST00000356534 MAP2P11137 1827 aaKnown RBP28.13■■■□□ 2.09
CHRD-203ENST00000356534 GGNBP2Q9H3C7 697 aa28.13■■■□□ 2.09
CHRD-203ENST00000356534 ERBB3P21860 1342 aa28.13■■■□□ 2.09
CHRD-203ENST00000356534 CDCA7Q9BWT1 371 aaPredicted RBP28.12■■■□□ 2.09
CHRD-203ENST00000356534 CARD10Q9BWT7 1032 aa28.11■■■□□ 2.09
CHRD-203ENST00000356534 CARD14Q9BXL6 1004 aa28.11■■■□□ 2.09
CHRD-203ENST00000356534 IP6K1Q92551 441 aa28.09■■■□□ 2.09
CHRD-203ENST00000356534 KIF24Q5T7B8 1368 aa28.09■■■□□ 2.09
CHRD-203ENST00000356534 PDE3BQ13370 1112 aa28.08■■■□□ 2.09
CHRD-203ENST00000356534 SF3B2Q13435 895 aaKnown RBP28.08■■■□□ 2.09
CHRD-203ENST00000356534 MAP3K19Q56UN5 1328 aa28.08■■■□□ 2.09
CHRD-203ENST00000356534 AMPHP49418 695 aa28.07■■■□□ 2.08
CHRD-203ENST00000356534 TNS1Q9HBL0 1735 aaKnown RBP28.06■■■□□ 2.08
CHRD-203ENST00000356534 C11orf95C9JLR9 678 aaPredicted RBP28.06■■■□□ 2.08
CHRD-203ENST00000356534 NSD2O96028 1365 aa28.06■■■□□ 2.08
CHRD-203ENST00000356534 RGPD2P0DJD1 1756 aa28.06■■■□□ 2.08
CHRD-203ENST00000356534 ANKRD24Q8TF21 1146 aa28.05■■■□□ 2.08
CHRD-203ENST00000356534 SBF2Q86WG5 1849 aa28.04■■■□□ 2.08
CHRD-203ENST00000356534 DISP2A7MBM2 1401 aa28.04■■■□□ 2.08
CHRD-203ENST00000356534 SMG6Q86US8 1419 aaKnown RBP28.04■■■□□ 2.08
CHRD-203ENST00000356534 KIF7Q2M1P5 1343 aa28.03■■■□□ 2.08
CHRD-203ENST00000356534 HOXC9P31274 260 aa28.03■■■□□ 2.08
CHRD-203ENST00000356534 FAM196AQ6ZSG2 479 aa28.03■■■□□ 2.08
CHRD-203ENST00000356534 PEAK1Q9H792 1746 aa28.02■■■□□ 2.08
CHRD-203ENST00000356534 PANK3Q9H999 370 aa28.02■■■□□ 2.08
CHRD-203ENST00000356534 NLRP2Q9NX02 1062 aa28.02■■■□□ 2.08
CHRD-203ENST00000356534 FLT4P35916 1363 aa28.01■■■□□ 2.07
CHRD-203ENST00000356534 DDB1Q16531 1140 aa28.01■■■□□ 2.07
CHRD-203ENST00000356534 OVOS2A0A0G2JMS6 1433 aa28.01■■■□□ 2.07
CHRD-203ENST00000356534 RRS1Q15050 365 aaKnown RBP27.99■■■□□ 2.07
CHRD-203ENST00000356534 TNS2Q63HR2 1409 aa27.99■■■□□ 2.07
CHRD-203ENST00000356534 INSRP06213 1382 aa27.97■■■□□ 2.07
CHRD-203ENST00000356534 KNSTRNQ9Y448 316 aa27.96■■■□□ 2.07
CHRD-203ENST00000356534 KAT6BQ8WYB5 2073 aa27.96■■■□□ 2.07
CHRD-203ENST00000356534 BAG6P46379 1132 aa27.95■■■□□ 2.06
CHRD-203ENST00000356534 IL2RBP14784 551 aa27.94■■■□□ 2.06
CHRD-203ENST00000356534 FBLN1P23142 703 aa27.94■■■□□ 2.06
CHRD-203ENST00000356534 FAM182BQ5T319 152 aa27.94■■■□□ 2.06
CHRD-203ENST00000356534 LTV1Q96GA3 475 aaPredicted RBP27.93■■■□□ 2.06
CHRD-203ENST00000356534 RGPD3A6NKT7 1758 aaPredicted RBP27.92■■■□□ 2.06
CHRD-203ENST00000356534 RGPD4Q7Z3J3 1758 aa27.92■■■□□ 2.06
CHRD-203ENST00000356534 EXOC5O00471 708 aa27.92■■■□□ 2.06
CHRD-203ENST00000356534 BCL9O00512 1426 aa27.91■■■□□ 2.06
CHRD-203ENST00000356534 EMILIN1Q9Y6C2 1016 aa27.88■■■□□ 2.05
CHRD-203ENST00000356534 TRIM37O94972 964 aa27.86■■■□□ 2.05
CHRD-203ENST00000356534 NHSQ6T4R5 1651 aa27.86■■■□□ 2.05
CHRD-203ENST00000356534 SHANK3Q9BYB0 1731 aa27.86■■■□□ 2.05
CHRD-203ENST00000356534 WASHC2AQ641Q2 1341 aa27.86■■■□□ 2.05
CHRD-203ENST00000356534 RREB1Q92766 1687 aa27.85■■■□□ 2.05
CHRD-203ENST00000356534 HSP90AB2PQ58FF8 381 aa27.85■■■□□ 2.05
CHRD-203ENST00000356534 DEFB132Q7Z7B7 95 aa27.85■■■□□ 2.05
CHRD-203ENST00000356534 PARD3Q8TEW0 1356 aa27.85■■■□□ 2.05
CHRD-203ENST00000356534 MORC1Q86VD1 984 aa27.84■■■□□ 2.05
CHRD-203ENST00000356534 PPM1GO15355 546 aaPredicted RBP27.83■■■□□ 2.05
CHRD-203ENST00000356534 MARCH10Q8NA82 808 aaPredicted RBP27.83■■■□□ 2.05
CHRD-203ENST00000356534 POLKQ9UBT6 870 aa27.83■■■□□ 2.05
CHRD-203ENST00000356534 TNNT2P45379 298 aaPredicted RBP27.8■■■□□ 2.04
CHRD-203ENST00000356534 AMER1Q5JTC6 1135 aaPredicted RBP27.8■■■□□ 2.04
CHRD-203ENST00000356534 PKD1L3Q7Z443 1732 aa27.8■■■□□ 2.04
CHRD-203ENST00000356534 MEGF6O75095 1541 aa27.79■■■□□ 2.04
CHRD-203ENST00000356534 NCAPD2Q15021 1401 aa27.79■■■□□ 2.04
CHRD-203ENST00000356534 NPC1L1Q9UHC9 1359 aa27.79■■■□□ 2.04
CHRD-203ENST00000356534 NBPF6Q5VWK0 638 aa27.79■■■□□ 2.04
CHRD-203ENST00000356534 RAPGEF4Q8WZA2 1011 aa27.79■■■□□ 2.04
CHRD-203ENST00000356534 NBPF4Q96M43 638 aa27.79■■■□□ 2.04
CHRD-203ENST00000356534 APBA3O96018 575 aa27.78■■■□□ 2.04
CHRD-203ENST00000356534 NUP188Q5SRE5 1749 aa27.78■■■□□ 2.04
CHRD-203ENST00000356534 DOT1LQ8TEK3 1739 aa27.76■■■□□ 2.03
CHRD-203ENST00000356534 PER1O15534 1290 aaPredicted RBP27.76■■■□□ 2.03
CHRD-203ENST00000356534 EN1Q05925 392 aaPredicted RBP27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms