RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 BAG4O95429 457 aaKnown RBP16.48■□□□□ 0.23
NCDN-201ENST00000356090 SHPRHQ149N8 1683 aa16.47■□□□□ 0.23
NCDN-201ENST00000356090 SIRT2Q8IXJ6 389 aa16.47■□□□□ 0.23
NCDN-201ENST00000356090 API5Q9BZZ5 524 aaKnown RBP16.47■□□□□ 0.23
NCDN-201ENST00000356090 ASXL2Q76L83 1435 aa16.47■□□□□ 0.23
NCDN-201ENST00000356090 KIF2CQ99661 725 aa16.47■□□□□ 0.23
NCDN-201ENST00000356090 EFCAB6Q5THR3 1501 aa16.46■□□□□ 0.23
NCDN-201ENST00000356090 PPIP5K1Q6PFW1 1433 aa16.46■□□□□ 0.23
NCDN-201ENST00000356090 QRICH2Q9H0J4 1663 aa16.46■□□□□ 0.23
NCDN-201ENST00000356090 PKP1Q13835 747 aa16.46■□□□□ 0.23
NCDN-201ENST00000356090 MROH2AA6NES4 1674 aa16.46■□□□□ 0.23
NCDN-201ENST00000356090 RNF214Q8ND24 703 aa16.46■□□□□ 0.23
NCDN-201ENST00000356090 RBM27Q9P2N5 1060 aaKnown RBP16.45■□□□□ 0.22
NCDN-201ENST00000356090 GSPT1P15170 499 aaKnown RBP16.45■□□□□ 0.22
NCDN-201ENST00000356090 PTMSP20962 102 aa16.45■□□□□ 0.22
NCDN-201ENST00000356090 KIAA1211Q6ZU35 1233 aa16.45■□□□□ 0.22
NCDN-201ENST00000356090 NCKAP5LQ9HCH0 1330 aa16.45■□□□□ 0.22
NCDN-201ENST00000356090 ST18O60284 1047 aa16.44■□□□□ 0.22
NCDN-201ENST00000356090 NECTIN2Q92692 538 aa16.44■□□□□ 0.22
NCDN-201ENST00000356090 MIS18AQ9NYP9 233 aa16.44■□□□□ 0.22
NCDN-201ENST00000356090 RBM10P98175 930 aaKnown RBP16.44■□□□□ 0.22
NCDN-201ENST00000356090 TSHZ3Q63HK5 1081 aa16.44■□□□□ 0.22
NCDN-201ENST00000356090 ZGPATQ8N5A5 531 aaKnown RBP16.44■□□□□ 0.22
NCDN-201ENST00000356090 RABEP1Q15276 862 aa16.44■□□□□ 0.22
NCDN-201ENST00000356090 INTS3Q68E01 1043 aaKnown RBP16.44■□□□□ 0.22
NCDN-201ENST00000356090 MPNDQ8N594 471 aa16.44■□□□□ 0.22
NCDN-201ENST00000356090 PTMAP06454 111 aaKnown RBP16.43■□□□□ 0.22
NCDN-201ENST00000356090 PLEKHM2Q8IWE5 1019 aa16.43■□□□□ 0.22
NCDN-201ENST00000356090 KIAA1210Q9ULL0 1709 aa16.43■□□□□ 0.22
NCDN-201ENST00000356090 MCM10Q7L590 875 aa16.43■□□□□ 0.22
NCDN-201ENST00000356090 COG3Q96JB2 828 aa16.43■□□□□ 0.22
NCDN-201ENST00000356090 ISY1Q9ULR0 285 aaKnown RBP16.43■□□□□ 0.22
NCDN-201ENST00000356090 PPRC1Q5VV67 1664 aaKnown RBP16.43■□□□□ 0.22
NCDN-201ENST00000356090 TULP4Q9NRJ4 1543 aa16.42■□□□□ 0.22
NCDN-201ENST00000356090 CCDC173Q0VFZ6 552 aa16.42■□□□□ 0.22
NCDN-201ENST00000356090 PLPPR3Q6T4P5 718 aa16.42■□□□□ 0.22
NCDN-201ENST00000356090 TRIM6-TRIM34B2RNG4 842 aa16.41■□□□□ 0.22
NCDN-201ENST00000356090 NUCB2P80303 420 aa16.41■□□□□ 0.22
NCDN-201ENST00000356090 R3HCC1Q9Y3T6 440 aaKnown RBP16.41■□□□□ 0.22
NCDN-201ENST00000356090 LMOD3Q0VAK6 560 aa16.41■□□□□ 0.22
NCDN-201ENST00000356090 SULT6B1Q6IMI4 303 aa16.41■□□□□ 0.22
NCDN-201ENST00000356090 IFT57Q9NWB7 429 aa16.41■□□□□ 0.22
NCDN-201ENST00000356090 RILPL2Q969X0 211 aa16.41■□□□□ 0.22
NCDN-201ENST00000356090 NEK4P51957 841 aa16.4■□□□□ 0.22
NCDN-201ENST00000356090 TXNDC2Q86VQ3 553 aa16.4■□□□□ 0.22
NCDN-201ENST00000356090 SDSP20132 328 aa16.4■□□□□ 0.22
NCDN-201ENST00000356090 KLHL40Q2TBA0 621 aa16.4■□□□□ 0.22
NCDN-201ENST00000356090 TTC22Q5TAA0 569 aa16.4■□□□□ 0.22
NCDN-201ENST00000356090 AEBP1Q8IUX7 1158 aa16.4■□□□□ 0.22
NCDN-201ENST00000356090 ZNF428Q96B54 188 aa16.4■□□□□ 0.22
NCDN-201ENST00000356090 FAM13BQ9NYF5 915 aa16.39■□□□□ 0.22
NCDN-201ENST00000356090 F6X3S4 739 aa16.39■□□□□ 0.21
NCDN-201ENST00000356090 MEIS3Q99687 375 aa16.39■□□□□ 0.21
NCDN-201ENST00000356090 DDIT3P35638 169 aa16.39■□□□□ 0.21
NCDN-201ENST00000356090 PLCB2Q00722 1185 aa16.39■□□□□ 0.21
NCDN-201ENST00000356090 PUS7Q96PZ0 661 aaKnown RBP16.39■□□□□ 0.21
NCDN-201ENST00000356090 SLC52A1Q9NWF4 448 aa16.39■□□□□ 0.21
NCDN-201ENST00000356090 ADGRB3O60242 1522 aa16.39■□□□□ 0.21
NCDN-201ENST00000356090 UHRF1BP1LA0JNW5 1464 aa16.39■□□□□ 0.21
NCDN-201ENST00000356090 ZSCAN30Q86W11 494 aa16.38■□□□□ 0.21
NCDN-201ENST00000356090 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.38■□□□□ 0.21
NCDN-201ENST00000356090 CFAP44Q96MT7 982 aa16.38■□□□□ 0.21
NCDN-201ENST00000356090 DEPDC5O75140 1603 aa16.38■□□□□ 0.21
NCDN-201ENST00000356090 SYCE3A1L190 88 aa16.38■□□□□ 0.21
NCDN-201ENST00000356090 SLC4A2P04920 1241 aa16.38■□□□□ 0.21
NCDN-201ENST00000356090 EXOC6BQ9Y2D4 811 aa16.38■□□□□ 0.21
NCDN-201ENST00000356090 ADGRB1O14514 1584 aa16.38■□□□□ 0.21
NCDN-201ENST00000356090 ZSCAN23Q3MJ62 389 aa16.38■□□□□ 0.21
NCDN-201ENST00000356090 NCBP3Q53F19 620 aaKnown RBP16.38■□□□□ 0.21
NCDN-201ENST00000356090 INO80Q9ULG1 1556 aaPredicted RBP16.37■□□□□ 0.21
NCDN-201ENST00000356090 NRXN1Q9ULB1 1477 aa16.37■□□□□ 0.21
NCDN-201ENST00000356090 XPCQ01831 940 aaPredicted RBP16.37■□□□□ 0.21
NCDN-201ENST00000356090 DNTTIP2Q5QJE6 756 aaKnown RBP16.37■□□□□ 0.21
NCDN-201ENST00000356090 ARHGAP45Q92619 1136 aa16.37■□□□□ 0.21
NCDN-201ENST00000356090 GLI2P10070 1586 aa16.37■□□□□ 0.21
NCDN-201ENST00000356090 REC8O95072 547 aa16.37■□□□□ 0.21
NCDN-201ENST00000356090 ANO2Q9NQ90 1003 aa16.37■□□□□ 0.21
NCDN-201ENST00000356090 PRIM1P49642 420 aaKnown RBP16.36■□□□□ 0.21
NCDN-201ENST00000356090 AK9Q5TCS8 1911 aa16.36■□□□□ 0.21
NCDN-201ENST00000356090 VWDEQ8N2E2 1590 aa16.36■□□□□ 0.21
NCDN-201ENST00000356090 RRP9O43818 475 aaKnown RBP16.36■□□□□ 0.21
NCDN-201ENST00000356090 USP26Q9BXU7 913 aa16.36■□□□□ 0.21
NCDN-201ENST00000356090 MROH1Q8NDA8 1641 aa16.36■□□□□ 0.21
NCDN-201ENST00000356090 DCTPP1Q9H773 170 aa16.35■□□□□ 0.21
NCDN-201ENST00000356090 RBSNQ9H1K0 784 aa16.35■□□□□ 0.21
NCDN-201ENST00000356090 SETBP1Q9Y6X0 1596 aa16.34■□□□□ 0.21
NCDN-201ENST00000356090 GDPD2Q9HCC8 539 aa16.34■□□□□ 0.21
NCDN-201ENST00000356090 HMMRO75330 724 aa16.34■□□□□ 0.21
NCDN-201ENST00000356090 UPF3BQ9BZI7 483 aaKnown RBP16.34■□□□□ 0.21
NCDN-201ENST00000356090 ABCC4O15439 1325 aa16.34■□□□□ 0.21
NCDN-201ENST00000356090 YTHDC2Q9H6S0 1430 aaKnown RBP16.34■□□□□ 0.21
NCDN-201ENST00000356090 IL13P35225 146 aa16.33■□□□□ 0.2
NCDN-201ENST00000356090 RTF1Q92541 710 aaKnown RBP16.33■□□□□ 0.2
NCDN-201ENST00000356090 ERC2O15083 957 aa16.33■□□□□ 0.2
NCDN-201ENST00000356090 NCOA3Q9Y6Q9 1424 aa16.33■□□□□ 0.2
NCDN-201ENST00000356090 CEP85Q6P2H3 762 aa16.32■□□□□ 0.2
NCDN-201ENST00000356090 ANKRD44Q8N8A2 993 aa16.32■□□□□ 0.2
NCDN-201ENST00000356090 ZMYND15Q9H091 742 aa16.32■□□□□ 0.2
NCDN-201ENST00000356090 ESF1Q9H501 851 aaKnown RBP16.32■□□□□ 0.2
NCDN-201ENST00000356090 LMBRD1Q9NUN5 540 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms