RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 MADDQ8WXG6 1647 aa16.67■□□□□ 0.26
TRIM4-203ENST00000355947 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.66■□□□□ 0.26
TRIM4-203ENST00000355947 MBIPQ9NS73 344 aa16.66■□□□□ 0.26
TRIM4-203ENST00000355947 LMBRD1Q9NUN5 540 aa16.66■□□□□ 0.26
TRIM4-203ENST00000355947 TMEM63CQ9P1W3 806 aa16.66■□□□□ 0.26
TRIM4-203ENST00000355947 SDSP20132 328 aa16.66■□□□□ 0.26
TRIM4-203ENST00000355947 PLEKHM2Q8IWE5 1019 aa16.66■□□□□ 0.26
TRIM4-203ENST00000355947 GPT2Q8TD30 523 aa16.66■□□□□ 0.26
TRIM4-203ENST00000355947 EXOC6BQ9Y2D4 811 aa16.65■□□□□ 0.26
TRIM4-203ENST00000355947 PPIP5K1Q6PFW1 1433 aa16.65■□□□□ 0.26
TRIM4-203ENST00000355947 VAMP4O75379 141 aa16.65■□□□□ 0.26
TRIM4-203ENST00000355947 MAP4K4O95819 1239 aaPredicted RBP16.65■□□□□ 0.26
TRIM4-203ENST00000355947 CT47B1P0C2W7 299 aaPredicted RBP16.65■□□□□ 0.26
TRIM4-203ENST00000355947 PLEKHF1Q96S99 279 aa16.65■□□□□ 0.26
TRIM4-203ENST00000355947 C14orf93Q9H972 538 aaKnown RBP16.65■□□□□ 0.26
TRIM4-203ENST00000355947 CD109Q6YHK3 1445 aa16.65■□□□□ 0.26
TRIM4-203ENST00000355947 F6X3S4 739 aa16.64■□□□□ 0.25
TRIM4-203ENST00000355947 DDIT3P35638 169 aa16.64■□□□□ 0.25
TRIM4-203ENST00000355947 ZNF428Q96B54 188 aa16.64■□□□□ 0.25
TRIM4-203ENST00000355947 MRPL50Q8N5N7 158 aaKnown RBP16.63■□□□□ 0.25
TRIM4-203ENST00000355947 A0A1W2PP64 1363 aa16.63■□□□□ 0.25
TRIM4-203ENST00000355947 ZNF518AQ6AHZ1 1483 aa16.63■□□□□ 0.25
TRIM4-203ENST00000355947 IGSF3O75054 1194 aa16.63■□□□□ 0.25
TRIM4-203ENST00000355947 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.63■□□□□ 0.25
TRIM4-203ENST00000355947 CHMP4BQ9H444 224 aaKnown RBP16.63■□□□□ 0.25
TRIM4-203ENST00000355947 PPP1R9BQ96SB3 815 aa16.62■□□□□ 0.25
TRIM4-203ENST00000355947 USP25Q9UHP3 1055 aa16.62■□□□□ 0.25
TRIM4-203ENST00000355947 CLTCL1P53675 1640 aa16.62■□□□□ 0.25
TRIM4-203ENST00000355947 TTC22Q5TAA0 569 aa16.62■□□□□ 0.25
TRIM4-203ENST00000355947 GNAI1P63096 354 aa16.61■□□□□ 0.25
TRIM4-203ENST00000355947 CBX1P83916 185 aa16.61■□□□□ 0.25
TRIM4-203ENST00000355947 MCM10Q7L590 875 aa16.61■□□□□ 0.25
TRIM4-203ENST00000355947 TTC12Q9H892 705 aaPredicted RBP16.61■□□□□ 0.25
TRIM4-203ENST00000355947 IQGAP3Q86VI3 1631 aa16.61■□□□□ 0.25
TRIM4-203ENST00000355947 PLPPR3Q6T4P5 718 aa16.61■□□□□ 0.25
TRIM4-203ENST00000355947 WAPLQ7Z5K2 1190 aa16.61■□□□□ 0.25
TRIM4-203ENST00000355947 DDX54Q8TDD1 881 aaKnown RBP16.61■□□□□ 0.25
TRIM4-203ENST00000355947 MEIS3Q99687 375 aa16.61■□□□□ 0.25
TRIM4-203ENST00000355947 USP26Q9BXU7 913 aa16.61■□□□□ 0.25
TRIM4-203ENST00000355947 PREX2Q70Z35 1606 aa16.61■□□□□ 0.25
TRIM4-203ENST00000355947 VGFO15240 615 aaPredicted RBP16.61■□□□□ 0.25
TRIM4-203ENST00000355947 SPC24Q8NBT2 197 aa16.61■□□□□ 0.25
TRIM4-203ENST00000355947 ABCC11Q96J66 1382 aa16.6■□□□□ 0.25
TRIM4-203ENST00000355947 KIAA2012Q0VF49 1180 aa16.6■□□□□ 0.25
TRIM4-203ENST00000355947 CDK19Q9BWU1 502 aa16.6■□□□□ 0.25
TRIM4-203ENST00000355947 API5Q9BZZ5 524 aaKnown RBP16.6■□□□□ 0.25
TRIM4-203ENST00000355947 UNC13BO14795 1591 aa16.6■□□□□ 0.25
TRIM4-203ENST00000355947 PLCH2O75038 1416 aa16.6■□□□□ 0.25
TRIM4-203ENST00000355947 ZKSCAN5Q9Y2L8 839 aa16.6■□□□□ 0.25
TRIM4-203ENST00000355947 VIRMAQ69YN4 1812 aaKnown RBP16.59■□□□□ 0.25
TRIM4-203ENST00000355947 REC8O95072 547 aa16.59■□□□□ 0.25
TRIM4-203ENST00000355947 NFE2L2Q16236 605 aa16.59■□□□□ 0.25
TRIM4-203ENST00000355947 ALDH1L2Q3SY69 923 aa16.59■□□□□ 0.25
TRIM4-203ENST00000355947 FIBPO43427 364 aa16.58■□□□□ 0.25
TRIM4-203ENST00000355947 NME9Q86XW9 330 aa16.58■□□□□ 0.25
TRIM4-203ENST00000355947 CCDC39Q9UFE4 941 aa16.58■□□□□ 0.25
TRIM4-203ENST00000355947 TSPY26PQ9H489 355 aa16.58■□□□□ 0.24
TRIM4-203ENST00000355947 NCKAP5LQ9HCH0 1330 aa16.58■□□□□ 0.24
TRIM4-203ENST00000355947 TMX3Q96JJ7 454 aa16.58■□□□□ 0.24
TRIM4-203ENST00000355947 NOL7Q9UMY1 257 aaKnown RBP16.58■□□□□ 0.24
TRIM4-203ENST00000355947 MYOM1P52179 1685 aa16.58■□□□□ 0.24
TRIM4-203ENST00000355947 SPDYE4A6NLX3 237 aa16.57■□□□□ 0.24
TRIM4-203ENST00000355947 GADD45BO75293 160 aaPredicted RBP16.57■□□□□ 0.24
TRIM4-203ENST00000355947 ANKRD36BQ8N2N9 1353 aa16.57■□□□□ 0.24
TRIM4-203ENST00000355947 LAMC1P11047 1609 aa16.57■□□□□ 0.24
TRIM4-203ENST00000355947 IQGAP1P46940 1657 aa16.57■□□□□ 0.24
TRIM4-203ENST00000355947 FCHSD2O94868 740 aa16.57■□□□□ 0.24
TRIM4-203ENST00000355947 MLECQ14165 292 aa16.57■□□□□ 0.24
TRIM4-203ENST00000355947 SLC4A2P04920 1241 aa16.57■□□□□ 0.24
TRIM4-203ENST00000355947 IL1RAPL2Q9NP60 686 aa16.57■□□□□ 0.24
TRIM4-203ENST00000355947 ERC2O15083 957 aa16.56■□□□□ 0.24
TRIM4-203ENST00000355947 LRSAM1Q6UWE0 723 aa16.56■□□□□ 0.24
TRIM4-203ENST00000355947 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.56■□□□□ 0.24
TRIM4-203ENST00000355947 ZNF445P59923 1031 aa16.56■□□□□ 0.24
TRIM4-203ENST00000355947 AEBP1Q8IUX7 1158 aa16.56■□□□□ 0.24
TRIM4-203ENST00000355947 RAPGEF3O95398 923 aa16.55■□□□□ 0.24
TRIM4-203ENST00000355947 POLKQ9UBT6 870 aa16.55■□□□□ 0.24
TRIM4-203ENST00000355947 ZDHHC9Q9Y397 364 aa16.55■□□□□ 0.24
TRIM4-203ENST00000355947 HCLS1P14317 486 aaPredicted RBP16.55■□□□□ 0.24
TRIM4-203ENST00000355947 IQSEC2Q5JU85 1478 aa16.55■□□□□ 0.24
TRIM4-203ENST00000355947 SHROOM2Q13796 1616 aa16.55■□□□□ 0.24
TRIM4-203ENST00000355947 CEP152O94986 1710 aa16.55■□□□□ 0.24
TRIM4-203ENST00000355947 RNF17Q9BXT8 1623 aaKnown RBP16.55■□□□□ 0.24
TRIM4-203ENST00000355947 IDI1Q13907 227 aa16.54■□□□□ 0.24
TRIM4-203ENST00000355947 SULT6B1Q6IMI4 303 aa16.54■□□□□ 0.24
TRIM4-203ENST00000355947 PALD1Q9ULE6 856 aa16.54■□□□□ 0.24
TRIM4-203ENST00000355947 NCOA3Q9Y6Q9 1424 aa16.54■□□□□ 0.24
TRIM4-203ENST00000355947 MCCP23508 829 aa16.54■□□□□ 0.24
TRIM4-203ENST00000355947 CSPP1Q1MSJ5 1256 aa16.54■□□□□ 0.24
TRIM4-203ENST00000355947 TAOK2Q9UL54 1235 aa16.53■□□□□ 0.24
TRIM4-203ENST00000355947 TRPM2O94759 1503 aa16.53■□□□□ 0.24
TRIM4-203ENST00000355947 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.53■□□□□ 0.24
TRIM4-203ENST00000355947 ZMYM3Q14202 1370 aa16.53■□□□□ 0.24
TRIM4-203ENST00000355947 NPM1P06748 294 aaKnown RBP eCLIP16.52■□□□□ 0.24
TRIM4-203ENST00000355947 SASS6Q6UVJ0 657 aa16.52■□□□□ 0.24
TRIM4-203ENST00000355947 DRC7Q8IY82 874 aa16.52■□□□□ 0.24
TRIM4-203ENST00000355947 SYAP1Q96A49 352 aaPredicted RBP16.52■□□□□ 0.24
TRIM4-203ENST00000355947 DCTPP1Q9H773 170 aa16.52■□□□□ 0.24
TRIM4-203ENST00000355947 CWC22Q9HCG8 908 aaKnown RBP16.52■□□□□ 0.24
TRIM4-203ENST00000355947 PLXNC1O60486 1568 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms