RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 U2SURPO15042 1029 aaKnown RBP26.81■■□□□ 1.88
SIGMAR1-202ENST00000353468 EIF4A2Q14240 407 aaKnown RBP26.8■■□□□ 1.88
SIGMAR1-202ENST00000353468 U2AF1L5P0DN76 240 aaPredicted RBP26.8■■□□□ 1.88
SIGMAR1-202ENST00000353468 U2AF1Q01081 240 aaKnown RBP eCLIP26.8■■□□□ 1.88
SIGMAR1-202ENST00000353468 CPDO75976 1380 aa26.78■■□□□ 1.88
SIGMAR1-202ENST00000353468 COL22A1Q8NFW1 1626 aaPredicted RBP26.77■■□□□ 1.88
SIGMAR1-202ENST00000353468 KIAA0232Q92628 1395 aa26.77■■□□□ 1.88
SIGMAR1-202ENST00000353468 ABCA3Q99758 1704 aa26.76■■□□□ 1.88
SIGMAR1-202ENST00000353468 HNRNPUQ00839 825 aaKnown RBP eCLIP26.74■■□□□ 1.87
SIGMAR1-202ENST00000353468 BLMP54132 1417 aaPredicted RBP26.73■■□□□ 1.87
SIGMAR1-202ENST00000353468 AXIN2Q9Y2T1 843 aa26.73■■□□□ 1.87
SIGMAR1-202ENST00000353468 CHRNA2Q15822 529 aa26.72■■□□□ 1.87
SIGMAR1-202ENST00000353468 LTV1Q96GA3 475 aaPredicted RBP26.72■■□□□ 1.87
SIGMAR1-202ENST00000353468 PRDM11Q9NQV5 511 aa26.72■■□□□ 1.87
SIGMAR1-202ENST00000353468 CCDC146Q8IYE0 955 aa26.71■■□□□ 1.87
SIGMAR1-202ENST00000353468 COL18A1P39060 1754 aa26.7■■□□□ 1.87
SIGMAR1-202ENST00000353468 FCHSD2O94868 740 aa26.7■■□□□ 1.86
SIGMAR1-202ENST00000353468 HSPA1LP34931 641 aa26.7■■□□□ 1.86
SIGMAR1-202ENST00000353468 ABCC6O95255 1503 aa26.69■■□□□ 1.86
SIGMAR1-202ENST00000353468 JCADQ9P266 1359 aa26.69■■□□□ 1.86
SIGMAR1-202ENST00000353468 HMOX1P09601 288 aa26.68■■□□□ 1.86
SIGMAR1-202ENST00000353468 ANKRD24Q8TF21 1146 aa26.68■■□□□ 1.86
SIGMAR1-202ENST00000353468 EYA1Q99502 592 aa26.68■■□□□ 1.86
SIGMAR1-202ENST00000353468 PNNQ9H307 717 aaKnown RBP26.68■■□□□ 1.86
SIGMAR1-202ENST00000353468 RUNDC1Q96C34 613 aa26.67■■□□□ 1.86
SIGMAR1-202ENST00000353468 RGPD5Q99666 1765 aa26.67■■□□□ 1.86
SIGMAR1-202ENST00000353468 RSPH6AQ9H0K4 717 aa26.67■■□□□ 1.86
SIGMAR1-202ENST00000353468 FAM83GA6ND36 823 aa26.66■■□□□ 1.86
SIGMAR1-202ENST00000353468 SULT6B1Q6IMI4 303 aa26.66■■□□□ 1.86
SIGMAR1-202ENST00000353468 IGSF1Q8N6C5 1336 aa26.66■■□□□ 1.86
SIGMAR1-202ENST00000353468 RGPD1P0DJD0 1748 aa26.66■■□□□ 1.86
SIGMAR1-202ENST00000353468 PLEKHF1Q96S99 279 aa26.65■■□□□ 1.86
SIGMAR1-202ENST00000353468 ERBB3P21860 1342 aa26.64■■□□□ 1.86
SIGMAR1-202ENST00000353468 SENP3-EIF4A1A0A087X0R7 540 aa26.63■■□□□ 1.85
SIGMAR1-202ENST00000353468 NUTM2BA6NNL0 878 aaPredicted RBP26.63■■□□□ 1.85
SIGMAR1-202ENST00000353468 NUTM2EB1AL46 878 aaPredicted RBP26.63■■□□□ 1.85
SIGMAR1-202ENST00000353468 NUTM2AQ8IVF1 878 aaPredicted RBP26.63■■□□□ 1.85
SIGMAR1-202ENST00000353468 PRKAR2BP31323 418 aa26.63■■□□□ 1.85
SIGMAR1-202ENST00000353468 AEBP1Q8IUX7 1158 aa26.63■■□□□ 1.85
SIGMAR1-202ENST00000353468 APAF1O14727 1248 aa26.62■■□□□ 1.85
SIGMAR1-202ENST00000353468 NBPF6Q5VWK0 638 aa26.62■■□□□ 1.85
SIGMAR1-202ENST00000353468 NBPF4Q96M43 638 aa26.62■■□□□ 1.85
SIGMAR1-202ENST00000353468 LMO7Q8WWI1 1683 aa26.61■■□□□ 1.85
SIGMAR1-202ENST00000353468 CAMTA1Q9Y6Y1 1673 aa26.61■■□□□ 1.85
SIGMAR1-202ENST00000353468 ADAMTS2O95450 1211 aa26.6■■□□□ 1.85
SIGMAR1-202ENST00000353468 MAPK8IP3Q9UPT6 1336 aa26.59■■□□□ 1.85
SIGMAR1-202ENST00000353468 NEFMP07197 916 aa26.59■■□□□ 1.85
SIGMAR1-202ENST00000353468 TCP11L2Q8N4U5 519 aa26.59■■□□□ 1.85
SIGMAR1-202ENST00000353468 KDRP35968 1356 aa26.59■■□□□ 1.85
SIGMAR1-202ENST00000353468 SPATA31A6Q5VVP1 1343 aa26.59■■□□□ 1.85
SIGMAR1-202ENST00000353468 ZBED9Q6R2W3 1325 aa26.59■■□□□ 1.85
SIGMAR1-202ENST00000353468 CSB-PGBD3P0DP91 1061 aa26.58■■□□□ 1.85
SIGMAR1-202ENST00000353468 SALL2Q9Y467 1007 aaPredicted RBP26.58■■□□□ 1.85
SIGMAR1-202ENST00000353468 USHBP1Q8N6Y0 703 aa26.57■■□□□ 1.84
SIGMAR1-202ENST00000353468 RGPD2P0DJD1 1756 aa26.57■■□□□ 1.84
SIGMAR1-202ENST00000353468 COL14A1Q05707 1796 aaKnown RBP26.57■■□□□ 1.84
SIGMAR1-202ENST00000353468 NLRP2Q9NX02 1062 aa26.55■■□□□ 1.84
SIGMAR1-202ENST00000353468 BTG4Q9NY30 223 aa26.55■■□□□ 1.84
SIGMAR1-202ENST00000353468 COL5A2P05997 1499 aaPredicted RBP26.55■■□□□ 1.84
SIGMAR1-202ENST00000353468 EVA1CP58658 441 aa26.54■■□□□ 1.84
SIGMAR1-202ENST00000353468 PHACTR3Q96KR7 559 aa26.54■■□□□ 1.84
SIGMAR1-202ENST00000353468 WDR17Q8IZU2 1322 aa26.54■■□□□ 1.84
SIGMAR1-202ENST00000353468 NGEFQ8N5V2 710 aa26.54■■□□□ 1.84
SIGMAR1-202ENST00000353468 NCAPD2Q15021 1401 aa26.53■■□□□ 1.84
SIGMAR1-202ENST00000353468 FAM208AQ9UK61 1670 aaKnown RBP26.52■■□□□ 1.84
SIGMAR1-202ENST00000353468 TMPOP42166 694 aaKnown RBP26.52■■□□□ 1.84
SIGMAR1-202ENST00000353468 STRN4Q9NRL3 753 aa26.52■■□□□ 1.84
SIGMAR1-202ENST00000353468 RRP7AQ9Y3A4 280 aaKnown RBP26.52■■□□□ 1.84
SIGMAR1-202ENST00000353468 NEUROD2Q15784 382 aa26.51■■□□□ 1.83
SIGMAR1-202ENST00000353468 TOM1L2Q6ZVM7 507 aa26.5■■□□□ 1.83
SIGMAR1-202ENST00000353468 NCBP3Q53F19 620 aaKnown RBP26.5■■□□□ 1.83
SIGMAR1-202ENST00000353468 NFE2L2Q16236 605 aa26.48■■□□□ 1.83
SIGMAR1-202ENST00000353468 LARP1Q6PKG0 1096 aaKnown RBP26.48■■□□□ 1.83
SIGMAR1-202ENST00000353468 RIPK4P57078 832 aa26.46■■□□□ 1.83
SIGMAR1-202ENST00000353468 FBXO41Q8TF61 875 aa26.46■■□□□ 1.83
SIGMAR1-202ENST00000353468 CARD10Q9BWT7 1032 aa26.46■■□□□ 1.83
SIGMAR1-202ENST00000353468 LRP6O75581 1613 aa26.46■■□□□ 1.83
SIGMAR1-202ENST00000353468 CENPBP07199 599 aaPredicted RBP26.46■■□□□ 1.83
SIGMAR1-202ENST00000353468 CCDC27Q2M243 656 aa26.46■■□□□ 1.83
SIGMAR1-202ENST00000353468 PLCH1Q4KWH8 1693 aa26.45■■□□□ 1.83
SIGMAR1-202ENST00000353468 MTHFSDQ2M296 383 aaKnown RBP26.44■■□□□ 1.82
SIGMAR1-202ENST00000353468 WWC1Q8IX03 1113 aa26.44■■□□□ 1.82
SIGMAR1-202ENST00000353468 NGLY1Q96IV0 654 aa26.44■■□□□ 1.82
SIGMAR1-202ENST00000353468 C8orf37Q96NL8 207 aa26.44■■□□□ 1.82
SIGMAR1-202ENST00000353468 PHF23Q9BUL5 403 aaPredicted RBP26.44■■□□□ 1.82
SIGMAR1-202ENST00000353468 ZNF521Q96K83 1311 aa26.44■■□□□ 1.82
SIGMAR1-202ENST00000353468 SLIT2O94813 1529 aa26.44■■□□□ 1.82
SIGMAR1-202ENST00000353468 RAPGEF4Q8WZA2 1011 aa26.43■■□□□ 1.82
SIGMAR1-202ENST00000353468 CRB1P82279 1406 aa26.43■■□□□ 1.82
SIGMAR1-202ENST00000353468 GAS2L2Q8NHY3 880 aa26.42■■□□□ 1.82
SIGMAR1-202ENST00000353468 TRIM35Q9UPQ4 493 aa26.41■■□□□ 1.82
SIGMAR1-202ENST00000353468 MEX3CQ5U5Q3 659 aaKnown RBP26.41■■□□□ 1.82
SIGMAR1-202ENST00000353468 NWD2Q9ULI1 1742 aa26.4■■□□□ 1.82
SIGMAR1-202ENST00000353468 TATP17735 454 aaPredicted RBP26.4■■□□□ 1.82
SIGMAR1-202ENST00000353468 PDE3BQ13370 1112 aa26.4■■□□□ 1.82
SIGMAR1-202ENST00000353468 PLEKHO1Q53GL0 409 aaPredicted RBP26.4■■□□□ 1.82
SIGMAR1-202ENST00000353468 NRAPQ86VF7 1730 aa26.39■■□□□ 1.82
SIGMAR1-202ENST00000353468 AMOTQ4VCS5 1084 aa26.39■■□□□ 1.82
SIGMAR1-202ENST00000353468 FNBP4Q8N3X1 1017 aaPredicted RBP26.39■■□□□ 1.82
SIGMAR1-202ENST00000353468 LMOD3Q0VAK6 560 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms