RNA–Protein interactions for RNA: ENST00000349721.7

SMARCA2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 5,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-203ENST00000349721 CNTLNQ9NXG0 1405 aa17.59■□□□□ 0.41
SMARCA2-203ENST00000349721 KDM4AO75164 1064 aa17.59■□□□□ 0.41
SMARCA2-203ENST00000349721 IMMTQ16891 758 aaKnown RBP17.59■□□□□ 0.41
SMARCA2-203ENST00000349721 KIF18AQ8NI77 898 aa17.59■□□□□ 0.41
SMARCA2-203ENST00000349721 SYTL4Q96C24 671 aaPredicted RBP17.59■□□□□ 0.41
SMARCA2-203ENST00000349721 HNRNPMP52272 730 aaKnown RBP eCLIP17.58■□□□□ 0.41
SMARCA2-203ENST00000349721 IKQ13123 557 aaPredicted RBP17.58■□□□□ 0.41
SMARCA2-203ENST00000349721 PDE3AQ14432 1141 aa17.58■□□□□ 0.41
SMARCA2-203ENST00000349721 SMC1AQ14683 1233 aaKnown RBP17.58■□□□□ 0.41
SMARCA2-203ENST00000349721 SPATA24Q86W54 205 aa17.58■□□□□ 0.41
SMARCA2-203ENST00000349721 BACH2Q9BYV9 841 aa17.58■□□□□ 0.41
SMARCA2-203ENST00000349721 LARP1BQ659C4 914 aaKnown RBP17.58■□□□□ 0.4
SMARCA2-203ENST00000349721 NACADO15069 1562 aa17.58■□□□□ 0.4
SMARCA2-203ENST00000349721 SURF6O75683 361 aaKnown RBP17.58■□□□□ 0.4
SMARCA2-203ENST00000349721 ZNF397Q8NF99 534 aaPredicted RBP17.58■□□□□ 0.4
SMARCA2-203ENST00000349721 POTEB2H3BUK9 544 aa17.57■□□□□ 0.4
SMARCA2-203ENST00000349721 CEP63Q96MT8 703 aa17.57■□□□□ 0.4
SMARCA2-203ENST00000349721 SAMD1Q6SPF0 538 aaPredicted RBP17.57■□□□□ 0.4
SMARCA2-203ENST00000349721 PPM1EQ8WY54 764 aa17.57■□□□□ 0.4
SMARCA2-203ENST00000349721 CASQ1P31415 396 aa17.57■□□□□ 0.4
SMARCA2-203ENST00000349721 GPATCH11Q8N954 259 aa17.57■□□□□ 0.4
SMARCA2-203ENST00000349721 CCDC57Q2TAC2 916 aa17.57■□□□□ 0.4
SMARCA2-203ENST00000349721 MPNDQ8N594 471 aa17.56■□□□□ 0.4
SMARCA2-203ENST00000349721 DNAJC2Q99543 621 aaKnown RBP17.56■□□□□ 0.4
SMARCA2-203ENST00000349721 PRDM10Q9NQV6 1147 aa17.56■□□□□ 0.4
SMARCA2-203ENST00000349721 CDKL5O76039 1030 aa17.56■□□□□ 0.4
SMARCA2-203ENST00000349721 PPP6R1Q9UPN7 881 aa17.56■□□□□ 0.4
SMARCA2-203ENST00000349721 GCOM1H8Y6P7 765 aaPredicted RBP17.56■□□□□ 0.4
SMARCA2-203ENST00000349721 MYZAPP0CAP1 466 aa17.56■□□□□ 0.4
SMARCA2-203ENST00000349721 MAP3K11Q16584 847 aa17.56■□□□□ 0.4
SMARCA2-203ENST00000349721 CCDC7Q96M83 1385 aa17.55■□□□□ 0.4
SMARCA2-203ENST00000349721 KIF5CO60282 957 aa17.55■□□□□ 0.4
SMARCA2-203ENST00000349721 CETN2P41208 172 aa17.55■□□□□ 0.4
SMARCA2-203ENST00000349721 CCDC30Q5VVM6 783 aa17.55■□□□□ 0.4
SMARCA2-203ENST00000349721 SFPQP23246 707 aaKnown RBP eCLIP17.55■□□□□ 0.4
SMARCA2-203ENST00000349721 RNF187Q5TA31 235 aaPredicted RBP17.55■□□□□ 0.4
SMARCA2-203ENST00000349721 BMP2KQ9NSY1 1161 aaPredicted RBP17.55■□□□□ 0.4
SMARCA2-203ENST00000349721 EIF5P55010 431 aaKnown RBP17.54■□□□□ 0.4
SMARCA2-203ENST00000349721 MTMR7Q9Y216 660 aa17.54■□□□□ 0.4
SMARCA2-203ENST00000349721 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.54■□□□□ 0.47e-7■■■■■ 31.5
SMARCA2-203ENST00000349721 SEPT11Q9NVA2 429 aaKnown RBP17.54■□□□□ 0.4
SMARCA2-203ENST00000349721 BAZ1AQ9NRL2 1556 aaPredicted RBP17.54■□□□□ 0.4
SMARCA2-203ENST00000349721 GIGYF2Q6Y7W6 1299 aaKnown RBP17.54■□□□□ 0.4
SMARCA2-203ENST00000349721 SPA17Q15506 151 aa17.53■□□□□ 0.4
SMARCA2-203ENST00000349721 KLHL34Q8N239 644 aa17.53■□□□□ 0.4
SMARCA2-203ENST00000349721 PSME1Q06323 249 aa17.53■□□□□ 0.4
SMARCA2-203ENST00000349721 CCDC69A6NI79 296 aa17.52■□□□□ 0.4
SMARCA2-203ENST00000349721 GNAI2P04899 355 aa17.52■□□□□ 0.4
SMARCA2-203ENST00000349721 CFAP100Q494V2 611 aa17.52■□□□□ 0.4
SMARCA2-203ENST00000349721 PDS5BQ9NTI5 1447 aa17.52■□□□□ 0.4
SMARCA2-203ENST00000349721 CCDC83Q8IWF9 413 aa17.52■□□□□ 0.39
SMARCA2-203ENST00000349721 CCDC175P0C221 793 aa17.51■□□□□ 0.39
SMARCA2-203ENST00000349721 IFFO1Q0D2I5 559 aa17.51■□□□□ 0.39
SMARCA2-203ENST00000349721 SRCIN1Q9C0H9 1055 aa17.51■□□□□ 0.39
SMARCA2-203ENST00000349721 MINK1Q8N4C8 1332 aaPredicted RBP17.51■□□□□ 0.39
SMARCA2-203ENST00000349721 NEMFO60524 1076 aa17.51■□□□□ 0.39
SMARCA2-203ENST00000349721 STK3Q13188 491 aa17.51■□□□□ 0.39
SMARCA2-203ENST00000349721 CCDC158Q5M9N0 1113 aa17.51■□□□□ 0.39
SMARCA2-203ENST00000349721 IPO4Q8TEX9 1081 aaKnown RBP17.51■□□□□ 0.39
SMARCA2-203ENST00000349721 CCDC113Q9H0I3 377 aa17.51■□□□□ 0.39
SMARCA2-203ENST00000349721 ZHX3Q9H4I2 956 aa17.51■□□□□ 0.39
SMARCA2-203ENST00000349721 POLR3GO15318 223 aaPredicted RBP17.5■□□□□ 0.39
SMARCA2-203ENST00000349721 RAPGEF4Q8WZA2 1011 aa17.5■□□□□ 0.39
SMARCA2-203ENST00000349721 LUZP1Q86V48 1076 aa17.5■□□□□ 0.39
SMARCA2-203ENST00000349721 NACAP1Q9BZK3 213 aa17.5■□□□□ 0.39
SMARCA2-203ENST00000349721 POTEJP0CG39 1038 aa17.5■□□□□ 0.39
SMARCA2-203ENST00000349721 AIMP1Q12904 312 aaKnown RBP17.5■□□□□ 0.39
SMARCA2-203ENST00000349721 SOGA3Q5TF21 947 aa17.5■□□□□ 0.39
SMARCA2-203ENST00000349721 SMARCC1Q92922 1105 aaPredicted RBP17.5■□□□□ 0.39
SMARCA2-203ENST00000349721 MIA2Q96PC5 1412 aa17.5■□□□□ 0.39
SMARCA2-203ENST00000349721 IBSPP21815 317 aaPredicted RBP17.5■□□□□ 0.39
SMARCA2-203ENST00000349721 TTC39AQ5SRH9 613 aa17.5■□□□□ 0.39
SMARCA2-203ENST00000349721 PDRG1Q9NUG6 133 aa17.5■□□□□ 0.39
SMARCA2-203ENST00000349721 MCM5P33992 734 aa17.49■□□□□ 0.39
SMARCA2-203ENST00000349721 WASF1Q92558 559 aa17.49■□□□□ 0.39
SMARCA2-203ENST00000349721 CEP131Q9UPN4 1083 aa17.49■□□□□ 0.39
SMARCA2-203ENST00000349721 URI1O94763 535 aaPredicted RBP17.49■□□□□ 0.39
SMARCA2-203ENST00000349721 GTF2F1P35269 517 aaKnown RBP eCLIP17.49■□□□□ 0.39
SMARCA2-203ENST00000349721 SPECC1LQ69YQ0 1117 aa17.49■□□□□ 0.39
SMARCA2-203ENST00000349721 KIF4BQ2VIQ3 1234 aa17.49■□□□□ 0.39
SMARCA2-203ENST00000349721 STAC3Q96MF2 364 aa17.49■□□□□ 0.39
SMARCA2-203ENST00000349721 TIGD1Q96MW7 591 aa17.49■□□□□ 0.39
SMARCA2-203ENST00000349721 SYCE3A1L190 88 aa17.48■□□□□ 0.39
SMARCA2-203ENST00000349721 NEBLO76041 1014 aa17.48■□□□□ 0.39
SMARCA2-203ENST00000349721 KRT32Q14532 448 aa17.48■□□□□ 0.39
SMARCA2-203ENST00000349721 BLOC1S2Q6QNY1 142 aa17.48■□□□□ 0.39
SMARCA2-203ENST00000349721 ANO10Q9NW15 660 aa17.48■□□□□ 0.39
SMARCA2-203ENST00000349721 ANKRD18BA2A2Z9 1011 aa17.47■□□□□ 0.39
SMARCA2-203ENST00000349721 CCDC183Q5T5S1 534 aa17.47■□□□□ 0.39
SMARCA2-203ENST00000349721 ZSCAN25Q6NSZ9 544 aa17.47■□□□□ 0.39
SMARCA2-203ENST00000349721 PAFAH1B1P43034 410 aa17.47■□□□□ 0.39
SMARCA2-203ENST00000349721 HMOX1P09601 288 aa17.46■□□□□ 0.39
SMARCA2-203ENST00000349721 C6orf163Q5TEZ5 329 aa17.46■□□□□ 0.39
SMARCA2-203ENST00000349721 GNL3LQ9NVN8 582 aaKnown RBP17.46■□□□□ 0.39
SMARCA2-203ENST00000349721 BMS1Q14692 1282 aaKnown RBP17.46■□□□□ 0.39
SMARCA2-203ENST00000349721 UBE2Q2Q8WVN8 375 aa17.46■□□□□ 0.39
SMARCA2-203ENST00000349721 DNAAF4Q8WXU2 420 aa17.46■□□□□ 0.39
SMARCA2-203ENST00000349721 GTF2A1P52655 376 aaPredicted RBP17.46■□□□□ 0.39
SMARCA2-203ENST00000349721 DYNC1I1O14576 645 aa17.45■□□□□ 0.38
SMARCA2-203ENST00000349721 TNNT1P13805 278 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms