RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 ZRANB1Q9UGI0 708 aa27.71■■■□□ 2.03
CLTA-202ENST00000345519 RGPD1P0DJD0 1748 aa27.7■■■□□ 2.03
CLTA-202ENST00000345519 HSPA5P11021 654 aaKnown RBP27.69■■■□□ 2.02
CLTA-202ENST00000345519 CCDC9Q9Y3X0 531 aaKnown RBP27.69■■■□□ 2.02
CLTA-202ENST00000345519 TNS1Q9HBL0 1735 aaKnown RBP27.69■■■□□ 2.02
CLTA-202ENST00000345519 BARGINQ6ZT62 677 aa27.68■■■□□ 2.02
CLTA-202ENST00000345519 FAM98CQ17RN3 349 aaKnown RBP27.67■■■□□ 2.02
CLTA-202ENST00000345519 LARP1Q6PKG0 1096 aaKnown RBP27.67■■■□□ 2.02
CLTA-202ENST00000345519 AXIN2Q9Y2T1 843 aa27.66■■■□□ 2.02
CLTA-202ENST00000345519 PEAK1Q9H792 1746 aa27.66■■■□□ 2.02
CLTA-202ENST00000345519 STRN4Q9NRL3 753 aa27.65■■■□□ 2.02
CLTA-202ENST00000345519 THRAP3Q9Y2W1 955 aaKnown RBP27.65■■■□□ 2.02
CLTA-202ENST00000345519 WDR17Q8IZU2 1322 aa27.65■■■□□ 2.02
CLTA-202ENST00000345519 SBF2Q86WG5 1849 aa27.64■■■□□ 2.01
CLTA-202ENST00000345519 BLMP54132 1417 aaPredicted RBP27.63■■■□□ 2.01
CLTA-202ENST00000345519 RGPD2P0DJD1 1756 aa27.61■■■□□ 2.01
CLTA-202ENST00000345519 EVA1CP58658 441 aa27.61■■■□□ 2.01
CLTA-202ENST00000345519 KRT27Q7Z3Y8 459 aa27.61■■■□□ 2.01
CLTA-202ENST00000345519 MAP2P11137 1827 aaKnown RBP27.6■■■□□ 2.01
CLTA-202ENST00000345519 DISP2A7MBM2 1401 aa27.6■■■□□ 2.01
CLTA-202ENST00000345519 NSD3Q9BZ95 1437 aa27.6■■■□□ 2.01
CLTA-202ENST00000345519 FYB1O15117 783 aa27.6■■■□□ 2.01
CLTA-202ENST00000345519 TCP11L2Q8N4U5 519 aa27.6■■■□□ 2.01
CLTA-202ENST00000345519 CARD14Q9BXL6 1004 aa27.6■■■□□ 2.01
CLTA-202ENST00000345519 CCDC125Q86Z20 511 aa27.59■■■□□ 2.01
CLTA-202ENST00000345519 ERBB3P21860 1342 aa27.58■■■□□ 2.01
CLTA-202ENST00000345519 COG3Q96JB2 828 aa27.57■■■□□ 2
CLTA-202ENST00000345519 RTL1A6NKG5 1358 aa27.57■■■□□ 2
CLTA-202ENST00000345519 SOX12O15370 315 aa27.56■■■□□ 2
CLTA-202ENST00000345519 CCDC7Q96M83 1385 aa27.53■■■□□ 2
CLTA-202ENST00000345519 RGPD3A6NKT7 1758 aaPredicted RBP27.53■■■□□ 2
CLTA-202ENST00000345519 RGPD4Q7Z3J3 1758 aa27.53■■■□□ 2
CLTA-202ENST00000345519 KIF24Q5T7B8 1368 aa27.52■■■□□ 2
CLTA-202ENST00000345519 ZBTB7CA1YPR0 619 aa27.52■■■□□ 2
CLTA-202ENST00000345519 C11orf95C9JLR9 678 aaPredicted RBP27.52■■■□□ 2
CLTA-202ENST00000345519 CARD10Q9BWT7 1032 aa27.52■■■□□ 2
CLTA-202ENST00000345519 USP35Q9P2H5 1018 aa27.52■■■□□ 2
CLTA-202ENST00000345519 SHANK3Q9BYB0 1731 aa27.51■■□□□ 1.99
CLTA-202ENST00000345519 MAP3K19Q56UN5 1328 aa27.5■■□□□ 1.99
CLTA-202ENST00000345519 TOM1L2Q6ZVM7 507 aa27.5■■□□□ 1.99
CLTA-202ENST00000345519 IP6K1Q92551 441 aa27.5■■□□□ 1.99
CLTA-202ENST00000345519 A0A0G2JS52 829 aa27.49■■□□□ 1.99
CLTA-202ENST00000345519 MYT1Q01538 1121 aa27.49■■□□□ 1.99
CLTA-202ENST00000345519 GGNBP2Q9H3C7 697 aa27.49■■□□□ 1.99
CLTA-202ENST00000345519 RREB1Q92766 1687 aa27.47■■□□□ 1.99
CLTA-202ENST00000345519 CDCA7Q9BWT1 371 aaPredicted RBP27.47■■□□□ 1.99
CLTA-202ENST00000345519 BCL9O00512 1426 aa27.47■■□□□ 1.99
CLTA-202ENST00000345519 TNS2Q63HR2 1409 aa27.46■■□□□ 1.99
CLTA-202ENST00000345519 CGNL1Q0VF96 1302 aa27.45■■□□□ 1.99
CLTA-202ENST00000345519 HOXC9P31274 260 aa27.45■■□□□ 1.98
CLTA-202ENST00000345519 KIF7Q2M1P5 1343 aa27.44■■□□□ 1.98
CLTA-202ENST00000345519 NSD2O96028 1365 aa27.44■■□□□ 1.98
CLTA-202ENST00000345519 OVOS2A0A0G2JMS6 1433 aa27.43■■□□□ 1.98
CLTA-202ENST00000345519 ANKRD24Q8TF21 1146 aa27.43■■□□□ 1.98
CLTA-202ENST00000345519 NHSQ6T4R5 1651 aa27.41■■□□□ 1.98
CLTA-202ENST00000345519 FLT4P35916 1363 aa27.41■■□□□ 1.98
CLTA-202ENST00000345519 FAM196AQ6ZSG2 479 aa27.41■■□□□ 1.98
CLTA-202ENST00000345519 CSB-PGBD3P0DP91 1061 aa27.4■■□□□ 1.98
CLTA-202ENST00000345519 FBLN1P23142 703 aa27.4■■□□□ 1.98
CLTA-202ENST00000345519 INSRP06213 1382 aa27.39■■□□□ 1.98
CLTA-202ENST00000345519 FAM182BQ5T319 152 aa27.39■■□□□ 1.98
CLTA-202ENST00000345519 NCAPD2Q15021 1401 aa27.39■■□□□ 1.97
CLTA-202ENST00000345519 SMG6Q86US8 1419 aaKnown RBP27.39■■□□□ 1.97
CLTA-202ENST00000345519 PDE3BQ13370 1112 aa27.38■■□□□ 1.97
CLTA-202ENST00000345519 PANK3Q9H999 370 aa27.38■■□□□ 1.97
CLTA-202ENST00000345519 NUP188Q5SRE5 1749 aa27.38■■□□□ 1.97
CLTA-202ENST00000345519 RRS1Q15050 365 aaKnown RBP27.37■■□□□ 1.97
CLTA-202ENST00000345519 PKD1L3Q7Z443 1732 aa27.37■■□□□ 1.97
CLTA-202ENST00000345519 DDB1Q16531 1140 aa27.36■■□□□ 1.97
CLTA-202ENST00000345519 AMPHP49418 695 aa27.35■■□□□ 1.97
CLTA-202ENST00000345519 POLR3GLQ9BT43 218 aa27.35■■□□□ 1.97
CLTA-202ENST00000345519 NLRP2Q9NX02 1062 aa27.32■■□□□ 1.96
CLTA-202ENST00000345519 IL2RBP14784 551 aa27.31■■□□□ 1.96
CLTA-202ENST00000345519 SF3B2Q13435 895 aaKnown RBP27.31■■□□□ 1.96
CLTA-202ENST00000345519 MEGF6O75095 1541 aa27.31■■□□□ 1.96
CLTA-202ENST00000345519 DEFB132Q7Z7B7 95 aa27.3■■□□□ 1.96
CLTA-202ENST00000345519 MARCH10Q8NA82 808 aaPredicted RBP27.3■■□□□ 1.96
CLTA-202ENST00000345519 PARD3Q8TEW0 1356 aa27.3■■□□□ 1.96
CLTA-202ENST00000345519 EMILIN1Q9Y6C2 1016 aa27.29■■□□□ 1.96
CLTA-202ENST00000345519 WASHC2AQ641Q2 1341 aa27.29■■□□□ 1.96
CLTA-202ENST00000345519 DOT1LQ8TEK3 1739 aa27.29■■□□□ 1.96
CLTA-202ENST00000345519 BTAF1O14981 1849 aa27.29■■□□□ 1.96
CLTA-202ENST00000345519 SRCAPQ6ZRS2 3230 aa27.29■■□□□ 1.96
CLTA-202ENST00000345519 BAG6P46379 1132 aa27.28■■□□□ 1.96
CLTA-202ENST00000345519 PER1O15534 1290 aaPredicted RBP27.27■■□□□ 1.96
CLTA-202ENST00000345519 HSP90AB2PQ58FF8 381 aa27.27■■□□□ 1.96
CLTA-202ENST00000345519 AMER1Q5JTC6 1135 aaPredicted RBP27.26■■□□□ 1.95
CLTA-202ENST00000345519 POLKQ9UBT6 870 aa27.26■■□□□ 1.95
CLTA-202ENST00000345519 EXOC5O00471 708 aa27.25■■□□□ 1.95
CLTA-202ENST00000345519 TRIM37O94972 964 aa27.25■■□□□ 1.95
CLTA-202ENST00000345519 NPC1L1Q9UHC9 1359 aa27.24■■□□□ 1.95
CLTA-202ENST00000345519 NBPF6Q5VWK0 638 aa27.23■■□□□ 1.95
CLTA-202ENST00000345519 LTV1Q96GA3 475 aaPredicted RBP27.23■■□□□ 1.95
CLTA-202ENST00000345519 NBPF4Q96M43 638 aa27.23■■□□□ 1.95
CLTA-202ENST00000345519 KNSTRNQ9Y448 316 aa27.22■■□□□ 1.95
CLTA-202ENST00000345519 PLEKHG2Q9H7P9 1386 aa27.22■■□□□ 1.95
CLTA-202ENST00000345519 CAMKK2Q96RR4 588 aa27.21■■□□□ 1.95
CLTA-202ENST00000345519 TOGARAM1Q9Y4F4 1720 aa27.19■■□□□ 1.94
CLTA-202ENST00000345519 KAT6BQ8WYB5 2073 aa27.19■■□□□ 1.94
CLTA-202ENST00000345519 EN1Q05925 392 aaPredicted RBP27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms