RNA–Protein interactions for RNA: ENST00000340473.7

GTF2F2-201, Transcript of general transcription factor IIF subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F2, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F2-201ENST00000340473 IP6K1Q92551 441 aa17.8■□□□□ 0.44
GTF2F2-201ENST00000340473 NUDCQ9Y266 331 aa17.8■□□□□ 0.44
GTF2F2-201ENST00000340473 U2SURPO15042 1029 aaKnown RBP17.8■□□□□ 0.44
GTF2F2-201ENST00000340473 BLMP54132 1417 aaPredicted RBP17.8■□□□□ 0.44
GTF2F2-201ENST00000340473 KIAA0232Q92628 1395 aa17.8■□□□□ 0.44
GTF2F2-201ENST00000340473 U2AF1L5P0DN76 240 aaPredicted RBP17.79■□□□□ 0.44
GTF2F2-201ENST00000340473 U2AF1Q01081 240 aaKnown RBP eCLIP17.79■□□□□ 0.44
GTF2F2-201ENST00000340473 CPDO75976 1380 aa17.78■□□□□ 0.44
GTF2F2-201ENST00000340473 HAP1P54257 671 aaPredicted RBP17.78■□□□□ 0.44
GTF2F2-201ENST00000340473 AXIN2Q9Y2T1 843 aa17.78■□□□□ 0.44
GTF2F2-201ENST00000340473 COL18A1P39060 1754 aa17.77■□□□□ 0.44
GTF2F2-201ENST00000340473 CHRNA2Q15822 529 aa17.76■□□□□ 0.43
GTF2F2-201ENST00000340473 CCDC146Q8IYE0 955 aa17.76■□□□□ 0.43
GTF2F2-201ENST00000340473 RGPD5Q99666 1765 aa17.76■□□□□ 0.43
GTF2F2-201ENST00000340473 RGPD1P0DJD0 1748 aa17.76■□□□□ 0.43
GTF2F2-201ENST00000340473 SENP3-EIF4A1A0A087X0R7 540 aa17.76■□□□□ 0.43
GTF2F2-201ENST00000340473 HNRNPUQ00839 825 aaKnown RBP eCLIP17.76■□□□□ 0.43
GTF2F2-201ENST00000340473 LTV1Q96GA3 475 aaPredicted RBP17.76■□□□□ 0.43
GTF2F2-201ENST00000340473 ABCC6O95255 1503 aa17.75■□□□□ 0.43
GTF2F2-201ENST00000340473 HSPA1LP34931 641 aa17.74■□□□□ 0.43
GTF2F2-201ENST00000340473 PRDM11Q9NQV5 511 aa17.74■□□□□ 0.43
GTF2F2-201ENST00000340473 HMOX1P09601 288 aa17.73■□□□□ 0.43
GTF2F2-201ENST00000340473 EYA1Q99502 592 aa17.72■□□□□ 0.43
GTF2F2-201ENST00000340473 LMO7Q8WWI1 1683 aa17.72■□□□□ 0.43
GTF2F2-201ENST00000340473 JCADQ9P266 1359 aa17.72■□□□□ 0.43
GTF2F2-201ENST00000340473 ANKRD24Q8TF21 1146 aa17.72■□□□□ 0.43
GTF2F2-201ENST00000340473 RSPH6AQ9H0K4 717 aa17.72■□□□□ 0.43
GTF2F2-201ENST00000340473 AEBP1Q8IUX7 1158 aa17.71■□□□□ 0.43
GTF2F2-201ENST00000340473 FAM83GA6ND36 823 aa17.71■□□□□ 0.43
GTF2F2-201ENST00000340473 FCHSD2O94868 740 aa17.71■□□□□ 0.43
GTF2F2-201ENST00000340473 PLEKHF1Q96S99 279 aa17.71■□□□□ 0.43
GTF2F2-201ENST00000340473 IGSF1Q8N6C5 1336 aa17.71■□□□□ 0.42
GTF2F2-201ENST00000340473 RGPD2P0DJD1 1756 aa17.7■□□□□ 0.42
GTF2F2-201ENST00000340473 SULT6B1Q6IMI4 303 aa17.7■□□□□ 0.42
GTF2F2-201ENST00000340473 RUNDC1Q96C34 613 aa17.7■□□□□ 0.42
GTF2F2-201ENST00000340473 CAMTA1Q9Y6Y1 1673 aa17.7■□□□□ 0.42
GTF2F2-201ENST00000340473 ERBB3P21860 1342 aa17.7■□□□□ 0.42
GTF2F2-201ENST00000340473 NUTM2BA6NNL0 878 aaPredicted RBP17.69■□□□□ 0.42
GTF2F2-201ENST00000340473 NUTM2EB1AL46 878 aaPredicted RBP17.69■□□□□ 0.42
GTF2F2-201ENST00000340473 PRKAR2BP31323 418 aa17.69■□□□□ 0.42
GTF2F2-201ENST00000340473 NBPF6Q5VWK0 638 aa17.69■□□□□ 0.42
GTF2F2-201ENST00000340473 NUTM2AQ8IVF1 878 aaPredicted RBP17.69■□□□□ 0.42
GTF2F2-201ENST00000340473 NBPF4Q96M43 638 aa17.69■□□□□ 0.42
GTF2F2-201ENST00000340473 APAF1O14727 1248 aa17.68■□□□□ 0.42
GTF2F2-201ENST00000340473 KDRP35968 1356 aa17.67■□□□□ 0.42
GTF2F2-201ENST00000340473 ADAMTS2O95450 1211 aa17.67■□□□□ 0.42
GTF2F2-201ENST00000340473 USHBP1Q8N6Y0 703 aa17.67■□□□□ 0.42
GTF2F2-201ENST00000340473 COL14A1Q05707 1796 aaKnown RBP17.67■□□□□ 0.42
GTF2F2-201ENST00000340473 SALL2Q9Y467 1007 aaPredicted RBP17.67■□□□□ 0.42
GTF2F2-201ENST00000340473 COL5A2P05997 1499 aaPredicted RBP17.66■□□□□ 0.42
GTF2F2-201ENST00000340473 TCP11L2Q8N4U5 519 aa17.66■□□□□ 0.42
GTF2F2-201ENST00000340473 ZBED9Q6R2W3 1325 aa17.66■□□□□ 0.42
GTF2F2-201ENST00000340473 PHACTR3Q96KR7 559 aa17.66■□□□□ 0.42
GTF2F2-201ENST00000340473 PNNQ9H307 717 aaKnown RBP17.66■□□□□ 0.42
GTF2F2-201ENST00000340473 NCAPD2Q15021 1401 aa17.65■□□□□ 0.42
GTF2F2-201ENST00000340473 MAPK8IP3Q9UPT6 1336 aa17.65■□□□□ 0.42
GTF2F2-201ENST00000340473 FAM208AQ9UK61 1670 aaKnown RBP17.64■□□□□ 0.42
GTF2F2-201ENST00000340473 CSB-PGBD3P0DP91 1061 aa17.64■□□□□ 0.42
GTF2F2-201ENST00000340473 RRP7AQ9Y3A4 280 aaKnown RBP17.64■□□□□ 0.41
GTF2F2-201ENST00000340473 SPATA31A6Q5VVP1 1343 aa17.63■□□□□ 0.41
GTF2F2-201ENST00000340473 NLRP2Q9NX02 1062 aa17.63■□□□□ 0.41
GTF2F2-201ENST00000340473 BTG4Q9NY30 223 aa17.63■□□□□ 0.41
GTF2F2-201ENST00000340473 PLCH1Q4KWH8 1693 aa17.63■□□□□ 0.41
GTF2F2-201ENST00000340473 LRP6O75581 1613 aa17.63■□□□□ 0.41
GTF2F2-201ENST00000340473 WDR17Q8IZU2 1322 aa17.62■□□□□ 0.41
GTF2F2-201ENST00000340473 NEUROD2Q15784 382 aa17.62■□□□□ 0.41
GTF2F2-201ENST00000340473 STRN4Q9NRL3 753 aa17.62■□□□□ 0.41
GTF2F2-201ENST00000340473 NEFMP07197 916 aa17.6■□□□□ 0.41
GTF2F2-201ENST00000340473 TMPOP42166 694 aaKnown RBP17.6■□□□□ 0.41
GTF2F2-201ENST00000340473 EVA1CP58658 441 aa17.6■□□□□ 0.41
GTF2F2-201ENST00000340473 LARP1Q6PKG0 1096 aaKnown RBP17.6■□□□□ 0.41
GTF2F2-201ENST00000340473 CENPBP07199 599 aaPredicted RBP17.59■□□□□ 0.41
GTF2F2-201ENST00000340473 TOM1L2Q6ZVM7 507 aa17.59■□□□□ 0.41
GTF2F2-201ENST00000340473 NRAPQ86VF7 1730 aa17.58■□□□□ 0.41
GTF2F2-201ENST00000340473 ZNF521Q96K83 1311 aa17.58■□□□□ 0.4
GTF2F2-201ENST00000340473 SLIT2O94813 1529 aa17.58■□□□□ 0.4
GTF2F2-201ENST00000340473 NFE2L2Q16236 605 aa17.57■□□□□ 0.4
GTF2F2-201ENST00000340473 RIPK4P57078 832 aa17.57■□□□□ 0.4
GTF2F2-201ENST00000340473 C8orf37Q96NL8 207 aa17.57■□□□□ 0.4
GTF2F2-201ENST00000340473 NWD2Q9ULI1 1742 aa17.56■□□□□ 0.4
GTF2F2-201ENST00000340473 MTHFSDQ2M296 383 aaKnown RBP17.56■□□□□ 0.4
GTF2F2-201ENST00000340473 NGEFQ8N5V2 710 aa17.56■□□□□ 0.4
GTF2F2-201ENST00000340473 PHF23Q9BUL5 403 aaPredicted RBP17.56■□□□□ 0.4
GTF2F2-201ENST00000340473 CRB1P82279 1406 aa17.56■□□□□ 0.4
GTF2F2-201ENST00000340473 WWC1Q8IX03 1113 aa17.56■□□□□ 0.4
GTF2F2-201ENST00000340473 CARD10Q9BWT7 1032 aa17.56■□□□□ 0.4
GTF2F2-201ENST00000340473 TRIM35Q9UPQ4 493 aa17.56■□□□□ 0.4
GTF2F2-201ENST00000340473 DLG5Q8TDM6 1919 aa17.56■□□□□ 0.4
GTF2F2-201ENST00000340473 CCDC27Q2M243 656 aa17.55■□□□□ 0.4
GTF2F2-201ENST00000340473 NCBP3Q53F19 620 aaKnown RBP17.55■□□□□ 0.4
GTF2F2-201ENST00000340473 MEGF6O75095 1541 aa17.55■□□□□ 0.4
GTF2F2-201ENST00000340473 FBXO41Q8TF61 875 aa17.55■□□□□ 0.4
GTF2F2-201ENST00000340473 NGLY1Q96IV0 654 aa17.54■□□□□ 0.4
GTF2F2-201ENST00000340473 RAPGEF4Q8WZA2 1011 aa17.53■□□□□ 0.4
GTF2F2-201ENST00000340473 USP35Q9P2H5 1018 aa17.53■□□□□ 0.4
GTF2F2-201ENST00000340473 CDCA7LQ96GN5 454 aa17.52■□□□□ 0.4
GTF2F2-201ENST00000340473 BCL9LQ86UU0 1499 aa17.52■□□□□ 0.4
GTF2F2-201ENST00000340473 MEX3CQ5U5Q3 659 aaKnown RBP17.52■□□□□ 0.39
GTF2F2-201ENST00000340473 GAS2L2Q8NHY3 880 aa17.52■□□□□ 0.39
GTF2F2-201ENST00000340473 FNBP4Q8N3X1 1017 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms