RNA–Protein interactions for RNA: ENST00000339647.5

UBC-201, Transcript of ubiquitin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBC, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-201ENST00000339647 INO80Q9ULG1 1556 aaPredicted RBP24.87■■□□□ 1.57
UBC-201ENST00000339647 ZGPATQ8N5A5 531 aaKnown RBP24.86■■□□□ 1.57
UBC-201ENST00000339647 EVC2Q86UK5 1308 aa24.85■■□□□ 1.57
UBC-201ENST00000339647 SAFB2Q14151 953 aaKnown RBP eCLIP24.85■■□□□ 1.57
UBC-201ENST00000339647 ADGRB1O14514 1584 aa24.84■■□□□ 1.57
UBC-201ENST00000339647 COL3A1P02461 1466 aaPredicted RBP24.84■■□□□ 1.57
UBC-201ENST00000339647 FANCAO15360 1455 aa24.84■■□□□ 1.57
UBC-201ENST00000339647 PLEKHM2Q8IWE5 1019 aa24.83■■□□□ 1.57
UBC-201ENST00000339647 MRPL50Q8N5N7 158 aaKnown RBP24.83■■□□□ 1.57
UBC-201ENST00000339647 USP26Q9BXU7 913 aa24.83■■□□□ 1.57
UBC-201ENST00000339647 TMEM63CQ9P1W3 806 aa24.83■■□□□ 1.57
UBC-201ENST00000339647 NSFL1CQ9UNZ2 370 aaKnown RBP24.83■■□□□ 1.57
UBC-201ENST00000339647 ZDHHC9Q9Y397 364 aa24.83■■□□□ 1.57
UBC-201ENST00000339647 PPRC1Q5VV67 1664 aaKnown RBP24.82■■□□□ 1.56
UBC-201ENST00000339647 SYCE3A1L190 88 aa24.82■■□□□ 1.56
UBC-201ENST00000339647 ELL2O00472 640 aaPredicted RBP24.82■■□□□ 1.56
UBC-201ENST00000339647 TSPYL6Q8N831 410 aa24.82■■□□□ 1.56
UBC-201ENST00000339647 NUTM2DQ5VT03 806 aaPredicted RBP24.81■■□□□ 1.56
UBC-201ENST00000339647 MROH1Q8NDA8 1641 aa24.81■■□□□ 1.56
UBC-201ENST00000339647 ATP7AQ04656 1500 aa24.81■■□□□ 1.56
UBC-201ENST00000339647 C16orf71Q8IYS4 520 aaPredicted RBP24.81■■□□□ 1.56
UBC-201ENST00000339647 TULP4Q9NRJ4 1543 aa24.81■■□□□ 1.56
UBC-201ENST00000339647 VAMP4O75379 141 aa24.8■■□□□ 1.56
UBC-201ENST00000339647 THUMPD2Q9BTF0 503 aaKnown RBP24.8■■□□□ 1.56
UBC-201ENST00000339647 BRPF1P55201 1214 aaPredicted RBP24.8■■□□□ 1.56
UBC-201ENST00000339647 A0A1W2PP64 1363 aa24.8■■□□□ 1.56
UBC-201ENST00000339647 LRSAM1Q6UWE0 723 aa24.79■■□□□ 1.56
UBC-201ENST00000339647 DIAPH1O60610 1272 aaKnown RBP24.79■■□□□ 1.56
UBC-201ENST00000339647 DYNC1I1O14576 645 aa24.79■■□□□ 1.56
UBC-201ENST00000339647 CSPP1Q1MSJ5 1256 aa24.79■■□□□ 1.56
UBC-201ENST00000339647 FOXD4L5Q5VV16 416 aaPredicted RBP24.79■■□□□ 1.56
UBC-201ENST00000339647 RNF214Q8ND24 703 aa24.79■■□□□ 1.56
UBC-201ENST00000339647 FOXD4L4Q8WXT5 416 aaPredicted RBP24.79■■□□□ 1.56
UBC-201ENST00000339647 EFCAB6Q5THR3 1501 aa24.78■■□□□ 1.56
UBC-201ENST00000339647 ATAD2Q6PL18 1390 aa24.78■■□□□ 1.56
UBC-201ENST00000339647 CHMP4BQ9H444 224 aaKnown RBP24.78■■□□□ 1.56
UBC-201ENST00000339647 ADGRB3O60242 1522 aa24.78■■□□□ 1.56
UBC-201ENST00000339647 CWC22Q9HCG8 908 aaKnown RBP24.78■■□□□ 1.56
UBC-201ENST00000339647 FYB1O15117 783 aa24.77■■□□□ 1.56
UBC-201ENST00000339647 TTC22Q5TAA0 569 aa24.77■■□□□ 1.56
UBC-201ENST00000339647 CCDC39Q9UFE4 941 aa24.77■■□□□ 1.56
UBC-201ENST00000339647 PIK3R4Q99570 1358 aa24.76■■□□□ 1.55
UBC-201ENST00000339647 ZBTB7CA1YPR0 619 aa24.76■■□□□ 1.55
UBC-201ENST00000339647 SASS6Q6UVJ0 657 aa24.76■■□□□ 1.55
UBC-201ENST00000339647 OTUD7AQ8TE49 926 aaPredicted RBP24.76■■□□□ 1.55
UBC-201ENST00000339647 ARHGAP45Q92619 1136 aa24.76■■□□□ 1.55
UBC-201ENST00000339647 PUS7Q96PZ0 661 aaKnown RBP24.76■■□□□ 1.55
UBC-201ENST00000339647 RAPGEF3O95398 923 aa24.75■■□□□ 1.55
UBC-201ENST00000339647 MCM5P33992 734 aa24.75■■□□□ 1.55
UBC-201ENST00000339647 CFAP65Q6ZU64 1925 aaKnown RBP24.75■■□□□ 1.55
UBC-201ENST00000339647 SENP3Q9H4L4 574 aaPredicted RBP24.75■■□□□ 1.55
UBC-201ENST00000339647 PTCH1Q13635 1447 aa24.74■■□□□ 1.55
UBC-201ENST00000339647 ZNF428Q96B54 188 aa24.74■■□□□ 1.55
UBC-201ENST00000339647 PRDM10Q9NQV6 1147 aa24.74■■□□□ 1.55
UBC-201ENST00000339647 ABCC4O15439 1325 aa24.74■■□□□ 1.55
UBC-201ENST00000339647 PRKAR2BP31323 418 aa24.74■■□□□ 1.55
UBC-201ENST00000339647 SRPK2P78362 688 aaKnown RBP24.73■■□□□ 1.55
UBC-201ENST00000339647 ST18O60284 1047 aa24.72■■□□□ 1.55
UBC-201ENST00000339647 ARAP3Q8WWN8 1544 aa24.72■■□□□ 1.55
UBC-201ENST00000339647 INTS3Q68E01 1043 aaKnown RBP24.72■■□□□ 1.55
UBC-201ENST00000339647 PPLO60437 1756 aa24.72■■□□□ 1.55
UBC-201ENST00000339647 JARID2Q92833 1246 aaPredicted RBP24.71■■□□□ 1.55
UBC-201ENST00000339647 MTERF4Q7Z6M4 381 aaKnown RBP24.71■■□□□ 1.55
UBC-201ENST00000339647 SMAP1Q8IYB5 467 aaPredicted RBP24.71■■□□□ 1.55
UBC-201ENST00000339647 PHACTR3Q96KR7 559 aa24.71■■□□□ 1.55
UBC-201ENST00000339647 FBLN1P23142 703 aa24.7■■□□□ 1.55
UBC-201ENST00000339647 DCTPP1Q9H773 170 aa24.7■■□□□ 1.55
UBC-201ENST00000339647 FCHSD2O94868 740 aa24.7■■□□□ 1.54
UBC-201ENST00000339647 SDSP20132 328 aa24.7■■□□□ 1.54
UBC-201ENST00000339647 REREQ9P2R6 1566 aa24.69■■□□□ 1.54
UBC-201ENST00000339647 GLI2P10070 1586 aa24.69■■□□□ 1.54
UBC-201ENST00000339647 PTMAP06454 111 aaKnown RBP24.68■■□□□ 1.54
UBC-201ENST00000339647 MPNDQ8N594 471 aa24.68■■□□□ 1.54
UBC-201ENST00000339647 APBB1O00213 710 aa24.68■■□□□ 1.54
UBC-201ENST00000339647 STK26Q9P289 416 aa24.68■■□□□ 1.54
UBC-201ENST00000339647 HMOX1P09601 288 aa24.67■■□□□ 1.54
UBC-201ENST00000339647 MBIPQ9NS73 344 aa24.67■■□□□ 1.54
UBC-201ENST00000339647 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.67■■□□□ 1.542e-6■□□□□ 9
UBC-201ENST00000339647 LRRC7Q96NW7 1537 aa24.67■■□□□ 1.54
UBC-201ENST00000339647 SMARCA5O60264 1052 aaPredicted RBP24.67■■□□□ 1.54
UBC-201ENST00000339647 GGT6Q6P531 493 aa24.67■■□□□ 1.54
UBC-201ENST00000339647 CFAP44Q96MT7 982 aa24.66■■□□□ 1.54
UBC-201ENST00000339647 TWISTNBQ3B726 338 aaPredicted RBP24.66■■□□□ 1.54
UBC-201ENST00000339647 TSC1Q92574 1164 aa24.66■■□□□ 1.54
UBC-201ENST00000339647 KNDC1Q76NI1 1749 aa24.65■■□□□ 1.54
UBC-201ENST00000339647 ARHGEF28Q8N1W1 1705 aaKnown RBP24.65■■□□□ 1.54
UBC-201ENST00000339647 PNPLA6Q8IY17 1366 aa24.65■■□□□ 1.54
UBC-201ENST00000339647 C8orf58Q8NAV2 365 aa24.65■■□□□ 1.54
UBC-201ENST00000339647 NFE2L2Q16236 605 aa24.64■■□□□ 1.54
UBC-201ENST00000339647 ABCA9Q8IUA7 1624 aa24.64■■□□□ 1.54
UBC-201ENST00000339647 KIAA2012Q0VF49 1180 aa24.64■■□□□ 1.53
UBC-201ENST00000339647 ZHX1Q9UKY1 873 aaPredicted RBP24.63■■□□□ 1.53
UBC-201ENST00000339647 FAM135BQ49AJ0 1406 aa24.63■■□□□ 1.53
UBC-201ENST00000339647 MBD3O95983 291 aa24.63■■□□□ 1.53
UBC-201ENST00000339647 DNTTIP2Q5QJE6 756 aaKnown RBP24.63■■□□□ 1.53
UBC-201ENST00000339647 TSPY26PQ9H489 355 aa24.63■■□□□ 1.53
UBC-201ENST00000339647 GNAI1P63096 354 aa24.62■■□□□ 1.53
UBC-201ENST00000339647 CCDC94Q9BW85 323 aaPredicted RBP24.62■■□□□ 1.53
UBC-201ENST00000339647 API5Q9BZZ5 524 aaKnown RBP24.62■■□□□ 1.53
UBC-201ENST00000339647 NPATQ14207 1427 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms