RNA–Protein interactions for RNA: ENST00000336937.8

ATF3-201, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best) BASIC

Gene ATF3, Length 482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-201ENST00000336937 CCDC125Q86Z20 511 aa9.58□□□□□ -0.88
ATF3-201ENST00000336937 RGPD1P0DJD0 1748 aa9.58□□□□□ -0.88
ATF3-201ENST00000336937 CCDC7Q96M83 1385 aa9.58□□□□□ -0.88
ATF3-201ENST00000336937 PLEKHG2Q9H7P9 1386 aa9.58□□□□□ -0.88
ATF3-201ENST00000336937 WDR17Q8IZU2 1322 aa9.57□□□□□ -0.88
ATF3-201ENST00000336937 EP400Q96L91 3159 aa9.57□□□□□ -0.88
ATF3-201ENST00000336937 EVA1CP58658 441 aa9.57□□□□□ -0.88
ATF3-201ENST00000336937 CCDC9Q9Y3X0 531 aaKnown RBP9.57□□□□□ -0.88
ATF3-201ENST00000336937 SPATA31A1Q5TZJ5 1347 aa9.56□□□□□ -0.88
ATF3-201ENST00000336937 BRWD3Q6RI45 1802 aa9.56□□□□□ -0.88
ATF3-201ENST00000336937 ZC3H6P61129 1189 aaKnown RBP9.56□□□□□ -0.88
ATF3-201ENST00000336937 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.56□□□□□ -0.88
ATF3-201ENST00000336937 LRRC37A3O60309 1634 aa9.56□□□□□ -0.88
ATF3-201ENST00000336937 ERBB3P21860 1342 aa9.56□□□□□ -0.88
ATF3-201ENST00000336937 RGPD5Q99666 1765 aa9.55□□□□□ -0.88
ATF3-201ENST00000336937 NUTM2GQ5VZR2 741 aa9.55□□□□□ -0.88
ATF3-201ENST00000336937 RGPD3A6NKT7 1758 aaPredicted RBP9.55□□□□□ -0.88
ATF3-201ENST00000336937 RGPD4Q7Z3J3 1758 aa9.55□□□□□ -0.88
ATF3-201ENST00000336937 FLT4P35916 1363 aa9.54□□□□□ -0.88
ATF3-201ENST00000336937 NME9Q86XW9 330 aa9.54□□□□□ -0.88
ATF3-201ENST00000336937 TCP11L2Q8N4U5 519 aa9.54□□□□□ -0.88
ATF3-201ENST00000336937 NPC1L1Q9UHC9 1359 aa9.53□□□□□ -0.88
ATF3-201ENST00000336937 ZEB1P37275 1124 aaPredicted RBP9.53□□□□□ -0.88
ATF3-201ENST00000336937 CHRNA2Q15822 529 aa9.53□□□□□ -0.88
ATF3-201ENST00000336937 STRN4Q9NRL3 753 aa9.53□□□□□ -0.88
ATF3-201ENST00000336937 OVOS2A0A0G2JMS6 1433 aa9.53□□□□□ -0.88
ATF3-201ENST00000336937 BCL9O00512 1426 aa9.53□□□□□ -0.88
ATF3-201ENST00000336937 TNS2Q63HR2 1409 aa9.53□□□□□ -0.88
ATF3-201ENST00000336937 A0A0G2JS52 829 aa9.52□□□□□ -0.89
ATF3-201ENST00000336937 FYB1O15117 783 aa9.52□□□□□ -0.89
ATF3-201ENST00000336937 MYT1Q01538 1121 aa9.52□□□□□ -0.89
ATF3-201ENST00000336937 TOM1L2Q6ZVM7 507 aa9.52□□□□□ -0.89
ATF3-201ENST00000336937 KRT27Q7Z3Y8 459 aa9.52□□□□□ -0.89
ATF3-201ENST00000336937 SEPT12Q8IYM1 358 aa9.52□□□□□ -0.89
ATF3-201ENST00000336937 CARD10Q9BWT7 1032 aa9.52□□□□□ -0.89
ATF3-201ENST00000336937 INSRP06213 1382 aa9.51□□□□□ -0.89
ATF3-201ENST00000336937 PARD3Q8TEW0 1356 aa9.51□□□□□ -0.89
ATF3-201ENST00000336937 DISP2A7MBM2 1401 aa9.51□□□□□ -0.89
ATF3-201ENST00000336937 PLEKHG5O94827 1062 aa9.51□□□□□ -0.89
ATF3-201ENST00000336937 CSB-PGBD3P0DP91 1061 aa9.51□□□□□ -0.89
ATF3-201ENST00000336937 SF3B2Q13435 895 aaKnown RBP9.51□□□□□ -0.89
ATF3-201ENST00000336937 FAM98CQ17RN3 349 aaKnown RBP9.51□□□□□ -0.89
ATF3-201ENST00000336937 IP6K1Q92551 441 aa9.51□□□□□ -0.89
ATF3-201ENST00000336937 KIF7Q2M1P5 1343 aa9.51□□□□□ -0.89
ATF3-201ENST00000336937 TNS1Q9HBL0 1735 aaKnown RBP9.51□□□□□ -0.89
ATF3-201ENST00000336937 MAP2P11137 1827 aaKnown RBP9.5□□□□□ -0.89
ATF3-201ENST00000336937 AMPHP49418 695 aa9.5□□□□□ -0.89
ATF3-201ENST00000336937 LARP1Q6PKG0 1096 aaKnown RBP9.5□□□□□ -0.89
ATF3-201ENST00000336937 KNSTRNQ9Y448 316 aa9.5□□□□□ -0.89
ATF3-201ENST00000336937 WASHC2AQ641Q2 1341 aa9.5□□□□□ -0.89
ATF3-201ENST00000336937 PEAK1Q9H792 1746 aa9.49□□□□□ -0.89
ATF3-201ENST00000336937 PDE3BQ13370 1112 aa9.49□□□□□ -0.89
ATF3-201ENST00000336937 FAM196AQ6ZSG2 479 aa9.49□□□□□ -0.89
ATF3-201ENST00000336937 UPF1Q92900 1129 aaKnown RBP eCLIP9.49□□□□□ -0.89
ATF3-201ENST00000336937 MAP3K19Q56UN5 1328 aa9.49□□□□□ -0.89
ATF3-201ENST00000336937 NCAPD2Q15021 1401 aa9.48□□□□□ -0.89
ATF3-201ENST00000336937 SOX12O15370 315 aa9.48□□□□□ -0.89
ATF3-201ENST00000336937 HOXC9P31274 260 aa9.48□□□□□ -0.89
ATF3-201ENST00000336937 ANKRD24Q8TF21 1146 aa9.48□□□□□ -0.89
ATF3-201ENST00000336937 POLR3GLQ9BT43 218 aa9.48□□□□□ -0.89
ATF3-201ENST00000336937 CARD14Q9BXL6 1004 aa9.48□□□□□ -0.89
ATF3-201ENST00000336937 GGNBP2Q9H3C7 697 aa9.48□□□□□ -0.89
ATF3-201ENST00000336937 ZBTB7CA1YPR0 619 aa9.47□□□□□ -0.89
ATF3-201ENST00000336937 IL2RBP14784 551 aa9.47□□□□□ -0.89
ATF3-201ENST00000336937 HMGB2P26583 209 aaKnown RBP9.47□□□□□ -0.89
ATF3-201ENST00000336937 DDB1Q16531 1140 aa9.47□□□□□ -0.89
ATF3-201ENST00000336937 PANK3Q9H999 370 aa9.47□□□□□ -0.89
ATF3-201ENST00000336937 AXIN2Q9Y2T1 843 aa9.47□□□□□ -0.89
ATF3-201ENST00000336937 NHSQ6T4R5 1651 aa9.47□□□□□ -0.89
ATF3-201ENST00000336937 PKD1L3Q7Z443 1732 aa9.47□□□□□ -0.89
ATF3-201ENST00000336937 SBF2Q86WG5 1849 aa9.47□□□□□ -0.89
ATF3-201ENST00000336937 USP35Q9P2H5 1018 aa9.46□□□□□ -0.9
ATF3-201ENST00000336937 BAG6P46379 1132 aa9.45□□□□□ -0.9
ATF3-201ENST00000336937 ZRANB1Q9UGI0 708 aa9.45□□□□□ -0.9
ATF3-201ENST00000336937 RREB1Q92766 1687 aa9.45□□□□□ -0.9
ATF3-201ENST00000336937 EXOC5O00471 708 aa9.44□□□□□ -0.9
ATF3-201ENST00000336937 NLRP2Q9NX02 1062 aa9.44□□□□□ -0.9
ATF3-201ENST00000336937 SHANK3Q9BYB0 1731 aa9.44□□□□□ -0.9
ATF3-201ENST00000336937 AMER1Q5JTC6 1135 aaPredicted RBP9.43□□□□□ -0.9
ATF3-201ENST00000336937 MORC1Q86VD1 984 aa9.43□□□□□ -0.9
ATF3-201ENST00000336937 RAPGEF4Q8WZA2 1011 aa9.43□□□□□ -0.9
ATF3-201ENST00000336937 RGPD2P0DJD1 1756 aa9.42□□□□□ -0.9
ATF3-201ENST00000336937 PCDH11XQ9BZA7 1347 aa9.42□□□□□ -0.9
ATF3-201ENST00000336937 PCDH11YQ9BZA8 1340 aa9.42□□□□□ -0.9
ATF3-201ENST00000336937 RRS1Q15050 365 aaKnown RBP9.42□□□□□ -0.9
ATF3-201ENST00000336937 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.42□□□□□ -0.9
ATF3-201ENST00000336937 PER1O15534 1290 aaPredicted RBP9.41□□□□□ -0.9
ATF3-201ENST00000336937 POLKQ9UBT6 870 aa9.41□□□□□ -0.9
ATF3-201ENST00000336937 DOT1LQ8TEK3 1739 aa9.41□□□□□ -0.9
ATF3-201ENST00000336937 MEGF6O75095 1541 aa9.41□□□□□ -0.9
ATF3-201ENST00000336937 IGSF1Q8N6C5 1336 aa9.4□□□□□ -0.9
ATF3-201ENST00000336937 TATP17735 454 aaPredicted RBP9.4□□□□□ -0.9
ATF3-201ENST00000336937 NUP188Q5SRE5 1749 aa9.39□□□□□ -0.91
ATF3-201ENST00000336937 KDRP35968 1356 aa9.39□□□□□ -0.91
ATF3-201ENST00000336937 PLSCR1O15162 318 aa9.39□□□□□ -0.91
ATF3-201ENST00000336937 HSP90AB2PQ58FF8 381 aa9.39□□□□□ -0.91
ATF3-201ENST00000336937 BCL11BQ9C0K0 894 aaPredicted RBP9.39□□□□□ -0.91
ATF3-201ENST00000336937 EMILIN1Q9Y6C2 1016 aa9.39□□□□□ -0.91
ATF3-201ENST00000336937 BTAF1O14981 1849 aa9.38□□□□□ -0.91
ATF3-201ENST00000336937 PPM1GO15355 546 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms